CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH28782
KRH28783
KRH69800
KRH69802
KRH76672

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07310.1	KRH28782	AT3G51180.1	21798944
AT1G07310.1	KRH28783	AT3G51180.1	21798944
AT1G07310.1	KRH69800	AT3G51180.1	21798944
AT1G07310.1	KRH69802	AT3G51180.1	21798944
AT1G07310.1	KRH76672	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31112	Soybean	cytosol	69.57	87.03
PGSC0003DMT400015573	Potato	cytosol	56.52	52.32
VIT_13s0019g03420.t01	Wine grape	cytosol	45.82	51.31
Solyc09g082950.1.1	Tomato	cytosol	54.85	50.62
GSMUA_Achr10P...	Banana	cytosol	50.84	46.06
Zm00001d012336_P001	Maize	mitochondrion	44.48	40.67
Os01t0853800-01	Rice	plastid	42.81	39.14
TraesCS3A01G367800.1	Wheat	plastid	43.81	35.69
HORVU3Hr1G085130.1	Barley	plastid	43.48	35.33
TraesCS3B01G399500.1	Wheat	plastid	43.48	35.33
KXG33717	Sorghum	mitochondrion	44.82	34.72
CDY10267	Canola	cytosol	36.79	34.59
TraesCS3D01G360800.1	Wheat	plastid	43.81	34.38
AT1G07310.1	Thale cress	cytosol	39.46	33.52
CDY09924	Canola	cytosol	37.12	33.43
CDY06697	Canola	cytosol	35.45	33.23
Bra015573.1-P	Field mustard	cytosol	34.78	32.6
Bra031570.1-P	Field mustard	cytosol	36.79	31.88
KRH38406	Soybean	nucleus	29.77	31.67
CDY06250	Canola	cytosol	36.45	31.59
KRH08885	Soybean	cytosol	23.08	28.87
KRH08884	Soybean	cytosol	24.41	28.52

Protein Annotations

EMBL:ACUP02010817	EnsemblPlants:KRG97773	EnsemblPlantsGene:GLYMA_18G030000	EntrezGene:102666594	Gene3D:2.60.40.150	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF19	PFAM:PF00168
PFscan:PS50004	ProteinID:KRG97772.1	ProteinID:KRG97773	ProteinID:KRG97773.1	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	UniParc:UPI0001CAAC2D	UniProt:A0A0R0EV02	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr18:-:2303476..2306918

Molecular Weight (calculated)

32752.3 Da

IEP (calculated)

8.995

GRAVY (calculated)

-0.660

Length

299 amino acids

Sequence
(BLAST)

001: MTSSRPPPSK SVDLDLTIVS AKHLKNVNWK NGNLKPYVVF WVDPERRLAT KSDDSGNTSP VWNERFALPL PLPLHDSFLT LEIFHSKPSD TPKPLVATLR
101: LPLKDLHDLH DSTRLRKFPL SRPSGRPHGK IHLKLGLLGR PQFDYASPNP NPNPNPSPNF VCYRGYTPSP SHSHSHSPSP PPSPYTSYTD SYSGYYPGYY
201: SGAPPPPPPR PFFDRYAGSS GPSAPLDYSS TYDSKPKAPK MGLGAGLAVG AVAGALGGLA LEEGLNYEED KIAERVENDV TAANVAAARD NYSDYRVDY

Best Arabidopsis Sequence Match ( AT1G07310.1 )
(BLAST)

001: MTSSEPLDLV VTVVSAKHLK NVNWRNGDLK PYVVLYLDQD HPLSTRSDDS SSIKPVWNER ITLPLTRSVH ESVLNIEVFH SNSSDLAKTL VGSVRFPLAR
101: LIDSDGSMIP ELINSLELVR PSGRPQGKIR LKLAIKDRPI PPPQHPPPRP QSQPLDYYSA PQGNHYYSPS PPPPPPPQAP ITAPSPQRDY REFSQSPSPS
201: PYAFTDHYYS GYYYPPPPPR SMYDRASNYG LPSGPSAPVD AFSSIDHKQP PLAPPRFSNY GPPPSGPSAP VDAFLVTEYK PQAPPMGSRL SSYGVPNGPS
301: APVDYSPYDH RQLQKTMGGL SLEEERAAAE RSESDFGARP NYSYGRDYRR EC

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LNV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.