Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY10267 | Canola | cytosol | 62.78 | 69.5 |
CDY09924 | Canola | cytosol | 63.35 | 67.17 |
Bra015573.1-P | Field mustard | cytosol | 58.81 | 64.89 |
CDY06697 | Canola | cytosol | 58.52 | 64.58 |
Bra031570.1-P | Field mustard | cytosol | 62.22 | 63.48 |
CDY06250 | Canola | cytosol | 60.8 | 62.03 |
KRH31112 | Soybean | cytosol | 27.84 | 41.0 |
GSMUA_Achr10P... | Banana | cytosol | 38.07 | 40.61 |
KRG97773 | Soybean | cytosol | 33.52 | 39.46 |
VIT_06s0004g06150.t01 | Wine grape | cytosol | 34.66 | 38.73 |
PGSC0003DMT400015573 | Potato | cytosol | 34.66 | 37.77 |
Solyc09g082950.1.1 | Tomato | cytosol | 33.81 | 36.73 |
Os01t0853800-01 | Rice | plastid | 32.95 | 35.47 |
Zm00001d012336_P001 | Maize | mitochondrion | 32.95 | 35.47 |
TraesCS3B01G399500.1 | Wheat | plastid | 33.52 | 32.07 |
TraesCS3A01G367800.1 | Wheat | plastid | 33.24 | 31.88 |
HORVU3Hr1G085130.1 | Barley | plastid | 33.24 | 31.79 |
TraesCS3D01G360800.1 | Wheat | plastid | 33.81 | 31.23 |
KXG33717 | Sorghum | mitochondrion | 33.52 | 30.57 |
AT5G23950.2 | Thale cress | cytosol | 16.76 | 25.11 |
Protein Annotations
Gene3D:2.60.40.150 | MapMan:35.2 | EntrezGene:837242 | ProteinID:AAF79559.1 | ProteinID:AEE28105.1 | ArrayExpress:AT1G07310 |
EnsemblPlantsGene:AT1G07310 | RefSeq:AT1G07310 | TAIR:AT1G07310 | RefSeq:AT1G07310-TAIR-G | EnsemblPlants:AT1G07310.1 | TAIR:AT1G07310.1 |
EMBL:AY054646 | EMBL:AY081489 | InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0008150 |
InterPro:IPR000008 | InterPro:IPR035892 | RefSeq:NP_563785.1 | PFAM:PF00168 | PO:PO:0000013 | PO:PO:0000037 |
PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
PO:PO:0025281 | PFscan:PS50004 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF53 | UniProt:Q9LNV0 | SMART:SM00239 |
SUPFAM:SSF49562 | UniParc:UPI000009DDD8 | SEG:seg | : | : | : |
Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LNV0]
Coordinates
chr1:-:2247112..2248961
Molecular Weight (calculated)
39015.6 Da
IEP (calculated)
7.803
GRAVY (calculated)
-0.747
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSEPLDLV VTVVSAKHLK NVNWRNGDLK PYVVLYLDQD HPLSTRSDDS SSIKPVWNER ITLPLTRSVH ESVLNIEVFH SNSSDLAKTL VGSVRFPLAR
101: LIDSDGSMIP ELINSLELVR PSGRPQGKIR LKLAIKDRPI PPPQHPPPRP QSQPLDYYSA PQGNHYYSPS PPPPPPPQAP ITAPSPQRDY REFSQSPSPS
201: PYAFTDHYYS GYYYPPPPPR SMYDRASNYG LPSGPSAPVD AFSSIDHKQP PLAPPRFSNY GPPPSGPSAP VDAFLVTEYK PQAPPMGSRL SSYGVPNGPS
301: APVDYSPYDH RQLQKTMGGL SLEEERAAAE RSESDFGARP NYSYGRDYRR EC
101: LIDSDGSMIP ELINSLELVR PSGRPQGKIR LKLAIKDRPI PPPQHPPPRP QSQPLDYYSA PQGNHYYSPS PPPPPPPQAP ITAPSPQRDY REFSQSPSPS
201: PYAFTDHYYS GYYYPPPPPR SMYDRASNYG LPSGPSAPVD AFSSIDHKQP PLAPPRFSNY GPPPSGPSAP VDAFLVTEYK PQAPPMGSRL SSYGVPNGPS
301: APVDYSPYDH RQLQKTMGGL SLEEERAAAE RSESDFGARP NYSYGRDYRR EC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.