Factsheet for Os01t0853800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0663200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07310.1	Os04t0663200-01	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012336_P001	Maize	mitochondrion	73.39	73.39
KXG33717	Sorghum	mitochondrion	77.37	65.54
HORVU3Hr1G085130.1	Barley	plastid	73.09	64.95
TraesCS3B01G399500.1	Wheat	plastid	72.17	64.13
TraesCS3A01G367800.1	Wheat	plastid	70.95	63.22
TraesCS3D01G360800.1	Wheat	plastid	72.17	61.94
KRH31112	Soybean	cytosol	33.95	46.44
GSMUA_Achr10P...	Banana	cytosol	46.79	46.36
VIT_06s0004g06150.t01	Wine grape	cytosol	41.59	43.17
KRG97773	Soybean	cytosol	39.14	42.81
VIT_13s0019g03420.t01	Wine grape	cytosol	34.86	42.7
PGSC0003DMT400015573	Potato	cytosol	40.98	41.49
Solyc09g082950.1.1	Tomato	cytosol	40.98	41.36
Os08t0562600-03	Rice	plastid	33.95	38.14
CDY10267	Canola	cytosol	35.17	36.16
CDY06697	Canola	cytosol	34.86	35.74
Bra015573.1-P	Field mustard	cytosol	34.56	35.42
Os09t0571200-01	Rice	cytosol	31.19	35.17
CDY09924	Canola	cytosol	33.95	33.43
AT1G07310.1	Thale cress	cytosol	35.47	32.95
Bra031570.1-P	Field mustard	cytosol	34.25	32.46
CDY06250	Canola	cytosol	33.95	32.17

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.2	EntrezGene:4324821	EMBL:AK069147	EMBL:AK105929	EMBL:AK106144
EMBL:AK106186	ProteinID:BAB84404.1	ProteinID:BAF06748.1	ProteinID:BAS75275.1	InterPro:C2_dom	InterPro:C2_domain_sf
ProteinID:EEE55687.1	InterPro:IPR000008	InterPro:IPR035892	EnsemblPlantsGene:Os01g0853800	EnsemblPlants:Os01t0853800-01	PFAM:PF00168
PANTHER:PTHR32246	PANTHER:PTHR32246:SF19	UniProt:Q8W0F9	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00000A8AF4
RefSeq:XP_015618803.1	SEG:seg	:	:	:	:

Description

C2 calcium-dependent membrane targeting domain containing protein. (Os01t0853800-01);C2 calcium-dependent membrane targeting domain containing protein. (Os01t0853800-04)

Coordinates

chr1:+:36771018..36772336

Molecular Weight (calculated)

35357.5 Da

IEP (calculated)

9.333

GRAVY (calculated)

-0.785

Length

327 amino acids

Sequence
(BLAST)

001: MASPSPSSSP LHPQHQHQHP LPPHPQPQYQ SPPPPMPPPP PAAPLKAIDL EVTVVSGKHL KNVNWRRGDL RAYVVAYLDP SRRAATRPDD VGGCKPAWNE
101: RVVLPLPPHL SPHDPSLLLS LDVFHSKPSD SPKPLVGSAR SPLRDLLFST NPNPSPDSPA SALITLPLLR PSGRPQGKLR IRLALRERSP PPPEPQYPPP
201: SSSPYYFPPP PPPAYSAPPP PQYGSEQYYR SGGYYSAPPP PPQYEYTAGP SAPVEYNRQY DPRAGSGSGN GRYGVGTGIA VGTVTGALGG LAIDEGVKYK
301: EEKSADRVED KVVPAGRDDD SRGYREY

Best Arabidopsis Sequence Match ( AT1G07310.1 )
(BLAST)

001: MTSSEPLDLV VTVVSAKHLK NVNWRNGDLK PYVVLYLDQD HPLSTRSDDS SSIKPVWNER ITLPLTRSVH ESVLNIEVFH SNSSDLAKTL VGSVRFPLAR
101: LIDSDGSMIP ELINSLELVR PSGRPQGKIR LKLAIKDRPI PPPQHPPPRP QSQPLDYYSA PQGNHYYSPS PPPPPPPQAP ITAPSPQRDY REFSQSPSPS
201: PYAFTDHYYS GYYYPPPPPR SMYDRASNYG LPSGPSAPVD AFSSIDHKQP PLAPPRFSNY GPPPSGPSAP VDAFLVTEYK PQAPPMGSRL SSYGVPNGPS
301: APVDYSPYDH RQLQKTMGGL SLEEERAAAE RSESDFGARP NYSYGRDYRR EC

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LNV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.