CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020043_P001	Maize	plastid	85.46	62.76
OQU89260	Sorghum	nucleus	54.26	53.12
Os09t0309700-01	Rice	nucleus	57.8	51.26
TraesCS5B01G178600.1	Wheat	nucleus	52.13	47.57
HORVU5Hr1G055190.2	Barley	nucleus	52.13	47.57
TraesCS5D01G185300.1	Wheat	nucleus	52.13	47.42
TraesCS5A01G180800.1	Wheat	nucleus	51.42	46.77
GSMUA_Achr4P06840_001	Banana	nucleus	23.05	25.59
KRH41626	Soybean	nucleus	14.89	25.45
GSMUA_Achr9P19330_001	Banana	mitochondrion	21.99	25.0
CDX84990	Canola	nucleus	21.28	24.19
CDY42104	Canola	nucleus	15.25	24.02
KRH39204	Soybean	nucleus	14.18	23.67
GSMUA_Achr4P13800_001	Banana	nucleus	21.99	22.79
AT1G25470.1	Thale cress	nucleus	23.05	22.65
AT1G68550.2	Thale cress	nucleus	25.89	22.53
CDY65135	Canola	nucleus	24.11	21.73
CDY38591	Canola	nucleus	23.05	21.59
CDY07380	Canola	nucleus	24.11	21.59
CDY44887	Canola	nucleus	24.11	21.52
Bra033923.1-P	Field mustard	nucleus	24.11	21.52
Bra004033.1-P	Field mustard	nucleus	24.11	21.45
CDY04234	Canola	nucleus	24.11	21.45
KRH48474	Soybean	nucleus	23.76	21.41
OQU82736	Sorghum	nucleus	18.09	21.25
CDX96010	Canola	nucleus	22.7	21.05
Bra004318.1-P	Field mustard	nucleus	22.7	21.05
GSMUA_Achr1P23090_001	Banana	nucleus	20.21	19.59
Bra036360.1-P	Field mustard	nucleus	19.15	19.22
VIT_01s0011g03470.t01	Wine grape	nucleus	21.28	18.75
KRH45262	Soybean	nucleus	24.11	18.68
EES03374	Sorghum	nucleus	21.63	18.65
KRH43430	Soybean	nucleus	22.34	18.64
KRH35957	Soybean	nucleus	23.4	18.59
EER89242	Sorghum	nucleus, plastid	21.99	18.56
Bra024743.1-P	Field mustard	plastid	21.99	18.56
KRG90812	Soybean	nucleus	24.11	18.48
EER90653	Sorghum	nucleus	15.6	18.33
CDY40978	Canola	nucleus	16.31	18.18
PGSC0003DMT400037698	Potato	nucleus	21.99	18.02
Solyc05g009450.1.1	Tomato	nucleus	21.63	17.89
KRH75373	Soybean	nucleus, plastid	23.4	17.79
KXG33839	Sorghum	nucleus	18.79	17.49
AT3G25890.2	Thale cress	nucleus	20.21	17.17
Solyc04g007180.1.1	Tomato	nucleus	20.21	17.01
KXG31528	Sorghum	nucleus	23.4	16.84
CDX83568	Canola	nucleus	18.44	16.61
CDY13596	Canola	nucleus	18.09	16.09
Bra025170.1-P	Field mustard	nucleus	18.09	16.04
CDX99741	Canola	nucleus	17.73	15.87
PGSC0003DMT400041053	Potato	nucleus	19.86	15.82
KRH04558	Soybean	nucleus	20.57	15.63
Solyc03g119580.1.1	Tomato	nucleus	21.28	15.58
PGSC0003DMT400014358	Potato	nucleus	21.28	15.42
KXG34718	Sorghum	nucleus	15.6	12.79
GSMUA_Achr10P...	Banana	vacuole	20.92	10.0

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:8071890	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	UniProt:C5X931
InterPro:DNA-bd_dom_sf	EnsemblPlants:EER98690	ProteinID:EER98690	ProteinID:EER98690.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF7	SMART:SM00380	EnsemblPlantsGene:SORBI_3002G165700	SUPFAM:SSF54171
UniParc:UPI0001A83C74	RefSeq:XP_002462169.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:51677529..51680708

Molecular Weight (calculated)

31498.9 Da

IEP (calculated)

4.507

GRAVY (calculated)

-0.524

Length

282 amino acids

Sequence
(BLAST)

001: MLPTVQKVRI FCADPDATDS SDDEEDKNIA EKKMVREVLV PVTNSKTSNS LKTLVPCGTK DQEVSEKKGK SSRFRGVRKR PWGRWAAEIR DPVRKTRKWI
101: GSYDSEEAAA AAYQAYANQI RDEVLAIKTK QSVSERAPLS SSSSVSCVSS SALCEQTAHE PQNRVLVEKD PEPVDEVFLN FSPTPKEISM DDLLGRIDEI
201: PVCDSVRPAD DLPLDNFKRL QDAFPISDFI GPGDDHLYDH YIGLADISHL PLPMNEPAFN LDAELDWSGF DFAAIERELD VL

Best Arabidopsis Sequence Match ( AT1G68550.1 )
(BLAST)

001: MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS

Arabidopsis Description

ERF118Ethylene-responsive transcription factor ERF118 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA27]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.