Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G185300.1 | Wheat | nucleus | 95.79 | 95.48 |
| TraesCS5A01G180800.1 | Wheat | nucleus | 95.79 | 95.48 |
| HORVU5Hr1G055190.2 | Barley | nucleus | 90.61 | 90.61 |
| EER98690 | Sorghum | nucleus | 47.57 | 52.13 |
| Os09t0309700-01 | Rice | nucleus | 51.13 | 49.69 |
| OQU89260 | Sorghum | nucleus | 46.28 | 49.65 |
| Zm00001d020043_P001 | Maize | plastid | 46.6 | 37.5 |
| KRH39204 | Soybean | nucleus | 13.59 | 24.85 |
| KRH41626 | Soybean | nucleus | 13.27 | 24.85 |
| CDX84990 | Canola | nucleus | 19.74 | 24.6 |
| CDY42104 | Canola | nucleus | 13.92 | 24.02 |
| AT1G25470.1 | Thale cress | nucleus | 21.68 | 23.34 |
| GSMUA_Achr4P06840_001 | Banana | nucleus | 18.45 | 22.44 |
| CDY07380 | Canola | nucleus | 22.65 | 22.22 |
| Bra004033.1-P | Field mustard | nucleus | 22.65 | 22.08 |
| CDY38591 | Canola | nucleus | 21.36 | 21.93 |
| GSMUA_Achr9P19330_001 | Banana | mitochondrion | 17.48 | 21.77 |
| CDY04234 | Canola | nucleus | 22.33 | 21.77 |
| TraesCS3B01G266800.1 | Wheat | nucleus | 20.39 | 21.5 |
| CDY65135 | Canola | nucleus | 21.68 | 21.41 |
| CDX96010 | Canola | nucleus | 21.04 | 21.38 |
| Bra004318.1-P | Field mustard | nucleus | 21.04 | 21.38 |
| GSMUA_Achr4P13800_001 | Banana | nucleus | 18.77 | 21.32 |
| Bra033923.1-P | Field mustard | nucleus | 21.68 | 21.2 |
| CDY44887 | Canola | nucleus | 21.68 | 21.2 |
| KRH48474 | Soybean | nucleus | 21.36 | 21.09 |
| AT1G68550.2 | Thale cress | nucleus | 22.01 | 20.99 |
| KRH43430 | Soybean | nucleus | 22.33 | 20.41 |
| KRH45262 | Soybean | nucleus | 23.3 | 19.78 |
| VIT_01s0011g03470.t01 | Wine grape | nucleus | 20.39 | 19.69 |
| Bra036360.1-P | Field mustard | nucleus | 17.8 | 19.57 |
| KRH35957 | Soybean | nucleus | 22.33 | 19.44 |
| KRG90812 | Soybean | nucleus | 22.98 | 19.29 |
| GSMUA_Achr1P23090_001 | Banana | nucleus | 18.12 | 19.24 |
| CDX83568 | Canola | nucleus | 19.42 | 19.17 |
| KRH75373 | Soybean | nucleus, plastid | 22.98 | 19.14 |
| CDY13596 | Canola | nucleus | 18.77 | 18.3 |
| Bra025170.1-P | Field mustard | nucleus | 18.77 | 18.24 |
| CDY40978 | Canola | nucleus | 14.89 | 18.18 |
| Bra024743.1-P | Field mustard | plastid | 19.42 | 17.96 |
| KRH04558 | Soybean | nucleus | 21.36 | 17.79 |
| PGSC0003DMT400037698 | Potato | nucleus | 19.74 | 17.73 |
| AT3G25890.2 | Thale cress | nucleus | 18.77 | 17.47 |
| Solyc05g009450.1.1 | Tomato | nucleus | 19.09 | 17.3 |
| CDX99741 | Canola | nucleus | 17.48 | 17.14 |
| TraesCS3B01G176200.1 | Wheat | nucleus | 19.42 | 17.09 |
| TraesCS7B01G018400.1 | Wheat | nucleus | 17.8 | 17.08 |
| Solyc04g007180.1.1 | Tomato | nucleus | 18.45 | 17.01 |
| Solyc03g119580.1.1 | Tomato | nucleus | 20.71 | 16.62 |
| PGSC0003DMT400014358 | Potato | nucleus | 20.71 | 16.45 |
| PGSC0003DMT400041053 | Potato | nucleus | 18.77 | 16.38 |
| TraesCS5B01G426600.1 | Wheat | nucleus | 15.21 | 15.99 |
| TraesCS4B01G122100.1 | Wheat | nucleus | 15.21 | 14.24 |
| TraesCS5B01G481300.1 | Wheat | nucleus | 15.53 | 13.68 |
| GSMUA_Achr10P... | Banana | vacuole | 17.48 | 9.15 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF7 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS5B01G178600 | EnsemblPlants:TraesCS5B01G178600.1 | TIGR:cd00018 | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:326572489..326575603
Molecular Weight (calculated)
34194.2 Da
IEP (calculated)
4.575
GRAVY (calculated)
-0.545
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MMVPCSRKVR ISCCDPDATD SSDEDDRHAK KEKRMTMEVL VPVKTSGPLK SRKTLVPCGT KKSMGTEKKQ PTSKYPGVRL RSWGKWAAEI RDPVSKTRKW
101: IGTFTSEEAA AAAYEAERNR VRTEMLAIKS RSPPSEHEAV SSEATVSCVS SSVSSGDQKA QEVHKLASME IDPDTADESL LHCSPEPLGK EIQVDAFLGR
201: MNVDESLVHC SSTPSDEEIP VDAFRSQMNE LPIGDYVCAT DKLSLDDISR LADMFPVNDF VDTTGEPPGD DYIGLADISH LPMPMFELDA ELNWEGFDFA
301: SMEHELEKL
101: IGTFTSEEAA AAAYEAERNR VRTEMLAIKS RSPPSEHEAV SSEATVSCVS SSVSSGDQKA QEVHKLASME IDPDTADESL LHCSPEPLGK EIQVDAFLGR
201: MNVDESLVHC SSTPSDEEIP VDAFRSQMNE LPIGDYVCAT DKLSLDDISR LADMFPVNDF VDTTGEPPGD DYIGLADISH LPMPMFELDA ELNWEGFDFA
301: SMEHELEKL
001: MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS
Arabidopsis Description
ERF118Ethylene-responsive transcription factor ERF118 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.