Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS5A01G468800.1 | |
| TraesCS5B01G481300.1 | |
| TraesCS5D01G481700.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G481700.1 | Wheat | nucleus | 84.9 | 93.71 |
| TraesCS5A01G468800.1 | Wheat | nucleus | 95.44 | 92.54 |
| HORVU5Hr1G111550.1 | Barley | nucleus | 82.34 | 86.01 |
| Os03t0815800-01 | Rice | nucleus | 39.32 | 57.26 |
| EER90653 | Sorghum | nucleus | 37.61 | 55.0 |
| Zm00001d034605_P001 | Maize | nucleus | 35.9 | 52.94 |
| Zm00001d005203_P001 | Maize | nucleus | 33.9 | 40.89 |
| Zm00001d019216_P001 | Maize | nucleus | 28.77 | 38.7 |
| KXG34718 | Sorghum | nucleus | 35.33 | 36.05 |
| CDY70837 | Canola | nucleus | 14.24 | 34.01 |
| Bra012352.1-P | Field mustard | nucleus | 14.24 | 34.01 |
| CDY09516 | Canola | nucleus | 14.81 | 31.71 |
| CDX68325 | Canola | nucleus | 14.81 | 31.52 |
| CDY49223 | Canola | nucleus | 14.81 | 31.52 |
| Bra003936.1-P | Field mustard | nucleus | 14.81 | 31.52 |
| CDY66105 | Canola | nucleus | 14.81 | 31.14 |
| Bra007963.1-P | Field mustard | nucleus | 14.81 | 31.14 |
| CDY12500 | Canola | nucleus | 13.68 | 30.97 |
| AT1G22985.1 | Thale cress | nucleus | 13.96 | 30.82 |
| AT1G71130.1 | Thale cress | nucleus | 13.96 | 30.43 |
| CDY41468 | Canola | nucleus | 13.68 | 30.38 |
| CDX91694 | Canola | nucleus | 13.39 | 29.19 |
| Bra016367.1-P | Field mustard | nucleus | 13.11 | 29.11 |
| TraesCS5B01G426600.1 | Wheat | nucleus | 20.8 | 24.83 |
| TraesCS3B01G266800.1 | Wheat | nucleus | 17.38 | 20.82 |
| TraesCS4B01G122100.1 | Wheat | nucleus | 18.52 | 19.7 |
| TraesCS7B01G018400.1 | Wheat | nucleus | 16.81 | 18.32 |
| TraesCS3B01G176200.1 | Wheat | nucleus | 16.81 | 16.81 |
| TraesCS5B01G178600.1 | Wheat | nucleus | 13.68 | 15.53 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF82 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS5B01G481300 | EnsemblPlants:TraesCS5B01G481300.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr5B:-:653808521..653809576
Molecular Weight (calculated)
37244.5 Da
IEP (calculated)
9.885
GRAVY (calculated)
-0.565
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPNPSLDML AAAAGMESAA AAAAAEAQPR GRVVRIIVHD ADATDSSSSE DESAPPPLAT MPTTKEERRR ERKKRRRVME AGRRDDSGLP HPPPSAGART
101: PSVRYRGVRQ RRWGKFASEI RDPIQGRRLW LGTFDTAEEA AAAYDAAKIR ISGSRRPADG FPFSFPPPEP AKPTVLRLPM PQPAKPTILR LPMPQPAKRI
201: TSPPPPPPPP EPAKPAISPP PLPAKPFALP LKLRLKLSFN AQVKDKGWNW CSAGDVKEEE DGGCDGEAKV GDVSIAGEVK VEAGGCAGEV KVEGVGCCAD
301: ESKEAGGSSE VQAVKPMWAM ITGKRKKRSG CGTRVGALHA SSVCVEEVGG T
101: PSVRYRGVRQ RRWGKFASEI RDPIQGRRLW LGTFDTAEEA AAAYDAAKIR ISGSRRPADG FPFSFPPPEP AKPTVLRLPM PQPAKPTILR LPMPQPAKRI
201: TSPPPPPPPP EPAKPAISPP PLPAKPFALP LKLRLKLSFN AQVKDKGWNW CSAGDVKEEE DGGCDGEAKV GDVSIAGEVK VEAGGCAGEV KVEGVGCCAD
301: ESKEAGGSSE VQAVKPMWAM ITGKRKKRSG CGTRVGALHA SSVCVEEVGG T
001: MTTEKENVTT AVAVKDGGEK SKEVSDKGVK KRKNVTKALA VNDGGEKSKE VRYRGVRRRP WGRYAAEIRD PVKKKRVWLG SFNTGEEAAR AYDSAAIRFR
101: GSKATTNFPL IGYYGISSAT PVNNNLSETV SDGNANLPLV GDDGNALASP VNNTLSETAR DGTLPSDCHD MLSPGVAEAV AGFFLDLPEV IALKEELDRV
201: CPDQFESIDM GLTIGPQTAV EEPETSSAVD CKLRMEPDLD LNASP
101: GSKATTNFPL IGYYGISSAT PVNNNLSETV SDGNANLPLV GDDGNALASP VNNTLSETAR DGTLPSDCHD MLSPGVAEAV AGFFLDLPEV IALKEELDRV
201: CPDQFESIDM GLTIGPQTAV EEPETSSAVD CKLRMEPDLD LNASP
Arabidopsis Description
ERF10At1g03800 [Source:UniProtKB/TrEMBL;Acc:Q08A59]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.