Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003936.1-P | Field mustard | nucleus | 98.18 | 98.18 |
| CDY49223 | Canola | nucleus | 97.58 | 97.58 |
| CDY09516 | Canola | nucleus | 83.64 | 84.15 |
| CDY66105 | Canola | nucleus | 84.24 | 83.23 |
| AT1G71130.1 | Thale cress | nucleus | 77.58 | 79.5 |
| CDY70837 | Canola | nucleus | 56.97 | 63.95 |
| CDY12500 | Canola | nucleus | 58.18 | 61.94 |
| CDY41468 | Canola | nucleus | 58.18 | 60.76 |
| CDX91694 | Canola | nucleus | 58.79 | 60.25 |
| CDY10965 | Canola | nucleus | 44.85 | 25.0 |
| Zm00001d034605_P001 | Maize | nucleus | 35.76 | 24.79 |
| CDX94215 | Canola | nucleus | 46.06 | 24.2 |
| EER90653 | Sorghum | nucleus | 35.15 | 24.17 |
| Os03t0815800-01 | Rice | nucleus | 35.15 | 24.07 |
| CDY03521 | Canola | nucleus | 46.06 | 23.6 |
| CDX80006 | Canola | nucleus | 38.18 | 23.42 |
| CDY47623 | Canola | nucleus | 44.24 | 23.17 |
| CDY42030 | Canola | nucleus | 38.18 | 23.08 |
| CDY53906 | Canola | nucleus | 39.39 | 22.89 |
| CDY52005 | Canola | nucleus | 39.39 | 22.65 |
| CDY47066 | Canola | nucleus | 45.45 | 21.93 |
| CDY54340 | Canola | nucleus | 44.24 | 21.66 |
| CDY11369 | Canola | nucleus | 36.97 | 21.55 |
| CDX92852 | Canola | nucleus | 41.82 | 21.3 |
| CDY29870 | Canola | nucleus | 41.82 | 21.23 |
| CDX71724 | Canola | nucleus | 36.97 | 21.18 |
| CDX97406 | Canola | nucleus | 41.82 | 21.04 |
| CDY14263 | Canola | nucleus | 41.82 | 21.04 |
| CDX96208 | Canola | nucleus | 44.24 | 20.92 |
| CDX95687 | Canola | nucleus | 32.12 | 20.87 |
| CDY71485 | Canola | nucleus | 42.42 | 20.77 |
| CDX90774 | Canola | nucleus | 34.55 | 20.58 |
| CDY05133 | Canola | nucleus | 34.55 | 20.58 |
| CDY49175 | Canola | nucleus | 43.64 | 20.51 |
| CDY71170 | Canola | nucleus | 41.82 | 20.47 |
| CDY61587 | Canola | nucleus | 44.24 | 20.17 |
| CDX84990 | Canola | nucleus | 29.09 | 19.35 |
| Zm00001d019216_P001 | Maize | nucleus | 27.27 | 17.24 |
| CDY42104 | Canola | nucleus | 17.58 | 16.2 |
| TraesCS5D01G481700.1 | Wheat | nucleus | 30.91 | 16.04 |
| CDY40978 | Canola | nucleus | 24.24 | 15.81 |
| Zm00001d005203_P001 | Maize | nucleus | 27.88 | 15.81 |
| CDY07380 | Canola | nucleus | 29.7 | 15.56 |
| HORVU5Hr1G111550.1 | Barley | nucleus | 31.52 | 15.48 |
| CDY04234 | Canola | nucleus | 29.7 | 15.46 |
| CDY65135 | Canola | nucleus | 29.09 | 15.34 |
| CDY38591 | Canola | nucleus | 27.88 | 15.28 |
| CDY44887 | Canola | nucleus | 29.09 | 15.19 |
| CDX96010 | Canola | nucleus | 27.88 | 15.13 |
| CDY13596 | Canola | nucleus | 28.48 | 14.83 |
| TraesCS5B01G481300.1 | Wheat | nucleus | 31.52 | 14.81 |
| CDX83568 | Canola | nucleus | 27.88 | 14.7 |
| TraesCS5A01G468800.1 | Wheat | nucleus | 31.52 | 14.36 |
| CDX99741 | Canola | nucleus | 26.06 | 13.65 |
| KXG34718 | Sorghum | nucleus | 27.88 | 13.37 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078BUD0 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDX68325 | ProteinID:CDX68325 | ProteinID:CDX68325.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00099623001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF43 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EF12FA | SEG:seg | : | : |
Description
BnaA07g23650D
Coordinates
chrLK031787:-:5021460..5022108
Molecular Weight (calculated)
18399.9 Da
IEP (calculated)
10.516
GRAVY (calculated)
-0.616
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRIVRISFT DAEATDSSSS EEEAEQLSEP SLARRRGKRL VKEIVIDSSD SDNKLDVCKT RFKIRIPPEF LKAATAEKKN KKKFRGVRQR PWGKWAAEIR
101: CGRALKGRRD RLWLGTFDTA EEAALAYDNA AVQLIGPHAP TNFSFPAENH EVKMVAGASA VARGA
101: CGRALKGRRD RLWLGTFDTA EEAALAYDNA AVQLIGPHAP TNFSFPAENH EVKMVAGASA VARGA
001: MKRIIRISFT DAEATDSSSD EDTEERGGAS QTRRRGKRLV KEIVIDPSDS ADKLDVCKTR FKIRIPAEFL KTAKTEKKYR GVRQRPWGKW VAEIRCGRGA
101: CKGRRDRLWL GTFNTAEEAA LAYDNASIKL IGPHAPTNFG LPAENQEDKT VIGASEVARG A
101: CKGRRDRLWL GTFNTAEEAA LAYDNASIKL IGPHAPTNFG LPAENQEDKT VIGASEVARG A
Arabidopsis Description
ERF070Ethylene-responsive transcription factor ERF070 [Source:UniProtKB/Swiss-Prot;Acc:Q9C995]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.