Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41468 | Canola | nucleus | 93.79 | 95.57 |
| Bra016367.1-P | Field mustard | nucleus | 90.68 | 92.41 |
| CDY70837 | Canola | nucleus | 72.67 | 79.59 |
| CDY12500 | Canola | nucleus | 75.78 | 78.71 |
| AT1G22985.1 | Thale cress | nucleus | 65.84 | 66.67 |
| CDY09516 | Canola | nucleus | 61.49 | 60.37 |
| CDY66105 | Canola | nucleus | 62.11 | 59.88 |
| CDY49223 | Canola | nucleus | 60.25 | 58.79 |
| CDX68325 | Canola | nucleus | 60.25 | 58.79 |
| CDY10965 | Canola | nucleus | 46.58 | 25.34 |
| CDX94215 | Canola | nucleus | 47.83 | 24.52 |
| CDY47623 | Canola | nucleus | 47.2 | 24.13 |
| CDY03521 | Canola | nucleus | 47.83 | 23.91 |
| CDX80006 | Canola | nucleus | 37.27 | 22.3 |
| CDY54340 | Canola | nucleus | 46.58 | 22.26 |
| CDY47066 | Canola | nucleus | 47.2 | 22.22 |
| Os03t0815800-01 | Rice | nucleus | 32.92 | 21.99 |
| Zm00001d034605_P001 | Maize | nucleus | 32.3 | 21.85 |
| CDX96208 | Canola | nucleus | 47.2 | 21.78 |
| CDY42030 | Canola | nucleus | 36.65 | 21.61 |
| CDY53906 | Canola | nucleus | 37.89 | 21.48 |
| CDY49175 | Canola | nucleus | 46.58 | 21.37 |
| CDY52005 | Canola | nucleus | 37.89 | 21.25 |
| EER90653 | Sorghum | nucleus | 31.68 | 21.25 |
| CDY11369 | Canola | nucleus | 37.27 | 21.2 |
| CDX71724 | Canola | nucleus | 37.89 | 21.18 |
| CDY61587 | Canola | nucleus | 45.96 | 20.44 |
| CDX92852 | Canola | nucleus | 40.99 | 20.37 |
| CDY29870 | Canola | nucleus | 40.99 | 20.31 |
| CDY71170 | Canola | nucleus | 42.24 | 20.18 |
| CDY71485 | Canola | nucleus | 41.61 | 19.88 |
| CDX95687 | Canola | nucleus | 31.06 | 19.68 |
| CDX97406 | Canola | nucleus | 39.75 | 19.51 |
| CDY14263 | Canola | nucleus | 39.75 | 19.51 |
| CDY05133 | Canola | nucleus | 32.92 | 19.13 |
| CDX90774 | Canola | nucleus | 32.92 | 19.13 |
| CDX84990 | Canola | nucleus | 29.19 | 18.95 |
| Zm00001d019216_P001 | Maize | nucleus | 27.33 | 16.86 |
| CDY42104 | Canola | nucleus | 18.01 | 16.2 |
| CDY65135 | Canola | nucleus | 31.06 | 15.97 |
| CDY44887 | Canola | nucleus | 31.06 | 15.82 |
| CDX83568 | Canola | nucleus | 30.43 | 15.65 |
| Zm00001d005203_P001 | Maize | nucleus | 27.95 | 15.46 |
| CDY13596 | Canola | nucleus | 30.43 | 15.46 |
| CDY38591 | Canola | nucleus | 28.57 | 15.28 |
| CDX96010 | Canola | nucleus | 28.57 | 15.13 |
| CDY40978 | Canola | nucleus | 23.6 | 15.02 |
| CDY07380 | Canola | nucleus | 28.57 | 14.6 |
| CDY04234 | Canola | nucleus | 28.57 | 14.51 |
| TraesCS5D01G481700.1 | Wheat | nucleus | 28.57 | 14.47 |
| HORVU5Hr1G111550.1 | Barley | nucleus | 29.19 | 13.99 |
| CDX99741 | Canola | nucleus | 27.33 | 13.97 |
| TraesCS5B01G481300.1 | Wheat | nucleus | 29.19 | 13.39 |
| TraesCS5A01G468800.1 | Wheat | nucleus | 29.19 | 12.98 |
| KXG34718 | Sorghum | nucleus | 27.33 | 12.79 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078DT79 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDX91694 | ProteinID:CDX91694 | ProteinID:CDX91694.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00153173001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF43 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EB9066 | SEG:seg | : | : |
Description
BnaC08g06130D
Coordinates
chrLK031869:-:239422..240086
Molecular Weight (calculated)
17691.8 Da
IEP (calculated)
10.731
GRAVY (calculated)
-0.845
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRIVRISFT DAEATDSSSS EDDEQTNTES PPSRRRGKRC VNEIVIDPTD SAGKNNRDRG GKTRFKIRIP ARLQKKNKKF RGVRQRPWGK WAAEIRCGKA
101: RDGRPVRVWL GTFETAEEAA LAYDKAAVQL IGPDAVTNFG GLKVVSKAAK EGSDAGTSAE A
101: RDGRPVRVWL GTFETAEEAA LAYDKAAVQL IGPDAVTNFG GLKVVSKAAK EGSDAGTSAE A
001: MKRIVRISFT DMEATDSSSS EDESPPSSRR RGKKLVKEIV IDHSDPPEVG KTRFKIRIPA SLLAARNTTA NKKKFRGVRQ RPWGKWAAEI RCGRVKGRPE
101: RIWLGTFETA EEAALAYDNA AIQLIGPDAP TNFGRPDVDS AVVKKQDSDA SGGASEEVV
101: RIWLGTFETA EEAALAYDNA AIQLIGPDAP TNFGRPDVDS AVVKKQDSDA SGGASEEVV
Arabidopsis Description
ERF069CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.