Factsheet for Bra016367.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000736.1-P
Bra003068.1-P
Bra003462.1-P
Bra003936.1-P
Bra004548.1-P
Bra007963.1-P
Bra012352.1-P
Bra013730.1-P
Bra016367.1-P
Bra019270.1-P
Bra022643.1-P
Bra023876.1-P
Bra025394.1-P
Bra029079.1-P
Bra036215.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G22985.1	Bra012352.1-P	AT1G22985.1	21705390
AT1G22985.1	Bra016367.1-P	AT1G22985.1	21705390
AT1G22985.1	Bra003936.1-P	AT1G71130.1	21705390
AT1G22985.1	Bra007963.1-P	AT1G71130.1	21705390
AT1G22985.1	Bra004548.1-P	AT2G46310.1	21705390
AT1G22985.1	Bra023876.1-P	AT3G21510.1	21705390
AT1G22985.1	Bra025394.1-P	AT3G29350.1	21705390
AT1G22985.1	Bra036215.1-P	AT3G29350.1	21705390
AT1G22985.1	Bra003462.1-P	AT3G61630.1	21705390
AT1G22985.1	Bra000736.1-P	AT4G11140.1	21705390
AT1G22985.1	Bra013730.1-P	AT4G23750.1	21705390
AT1G22985.1	Bra019270.1-P	AT4G23750.1	21705390
AT1G22985.1	Bra003068.1-P	AT5G53290.1	21705390
AT1G22985.1	Bra022643.1-P	AT5G53290.1	21705390
AT1G22985.1	Bra029079.1-P	AT5G53290.1	21705390

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41468	Canola	nucleus	95.57	95.57
CDX91694	Canola	nucleus	92.41	90.68
Bra012352.1-P	Field mustard	nucleus	69.62	74.83
AT1G22985.1	Thale cress	nucleus	65.19	64.78
Bra007963.1-P	Field mustard	nucleus	62.03	58.68
Bra003936.1-P	Field mustard	nucleus	59.49	56.97
Bra019270.1-P	Field mustard	nucleus	48.1	24.52
Bra013730.1-P	Field mustard	nucleus	48.73	24.44
Bra004548.1-P	Field mustard	nucleus	37.34	21.93
Os03t0815800-01	Rice	nucleus	32.91	21.58
Bra003462.1-P	Field mustard	nucleus	38.61	21.55
Zm00001d034605_P001	Maize	nucleus	32.28	21.43
Bra029079.1-P	Field mustard	nucleus	46.2	21.28
EER90653	Sorghum	nucleus	31.65	20.83
Bra022643.1-P	Field mustard	nucleus	46.2	20.74
Bra003068.1-P	Field mustard	nucleus	46.84	20.33
Bra040839.1-P	Field mustard	nucleus	41.14	20.0
Bra026295.1-P	Field mustard	nucleus	42.41	19.88
Bra000736.1-P	Field mustard	nucleus	33.54	19.41
Bra010389.1-P	Field mustard	nucleus	39.87	19.21
Zm00001d019216_P001	Maize	nucleus	27.22	16.48
Bra036360.1-P	Field mustard	nucleus	28.48	16.01
Bra033923.1-P	Field mustard	nucleus	31.01	15.51
Zm00001d005203_P001	Maize	nucleus	27.85	15.12
Bra004318.1-P	Field mustard	nucleus	28.48	14.8
Bra025170.1-P	Field mustard	nucleus	29.75	14.78
Bra004033.1-P	Field mustard	nucleus	28.48	14.2
TraesCS5D01G481700.1	Wheat	nucleus	28.48	14.15
Bra024743.1-P	Field mustard	plastid	29.11	13.77
HORVU5Hr1G111550.1	Barley	nucleus	29.11	13.69
TraesCS5B01G481300.1	Wheat	nucleus	29.11	13.11
TraesCS5A01G468800.1	Wheat	nucleus	29.11	12.71
KXG34718	Sorghum	nucleus	27.22	12.5

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra016367
EnsemblPlants:Bra016367.1	EnsemblPlants:Bra016367.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4DIP0	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF43	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00025465BF	SEG:seg	:	:	:	:

Description

AT1G22985 (E=6e-030) | AP2 domain-containing transcription factor, putative

Coordinates

chrA08:+:18074109..18074585

Molecular Weight (calculated)

17289.3 Da

IEP (calculated)

10.475

GRAVY (calculated)

-0.863

Length

158 amino acids

Sequence
(BLAST)

001: MKRIVRISFT DAEATDSSSS EDDEQPNTES PPPPRRRGKR CVNEIVIDPT DSSVNNNRDR GGKTRFKIRI PARVEKKNKK FRGVRQRPGG KWAAEIRCGK
101: SRDGRPVRVW LGTFETAEEA ALAYDKAAVQ LIGPDAVTNF GCSKAAKEGS DAGTSAVA

Best Arabidopsis Sequence Match ( AT1G22985.1 )
(BLAST)

001: MKRIVRISFT DMEATDSSSS EDESPPSSRR RGKKLVKEIV IDHSDPPEVG KTRFKIRIPA SLLAARNTTA NKKKFRGVRQ RPWGKWAAEI RCGRVKGRPE
101: RIWLGTFETA EEAALAYDNA AIQLIGPDAP TNFGRPDVDS AVVKKQDSDA SGGASEEVV

Arabidopsis Description

ERF069CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.