Factsheet for Bra036215.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000224.1-P
Bra002095.1-P
Bra002334.1-P
Bra003265.1-P
Bra004160.1-P
Bra006580.1-P
Bra007295.1-P
Bra013730.1-P
Bra014649.1-P
Bra016526.1-P
Bra016943.1-P
Bra018084.1-P
Bra018439.1-P
Bra019270.1-P
Bra019524.1-P
Bra019932.1-P
Bra023796.1-P
Bra024159.1-P
Bra025708.1-P
Bra030037.1-P
Bra031714.1-P
Bra032761.1-P
Bra033773.1-P
Bra035381.1-P
Bra036963.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G29350.1	Bra018439.1-P	AT1G10470.1	16965536
AT3G29350.1	Bra019932.1-P	AT1G10470.1	16965536
AT3G29350.1	Bra031714.1-P	AT1G10470.1	16965536
AT3G29350.1	Bra036963.1-P	AT1G10470.1	16965536
AT3G29350.1	Bra016526.1-P	AT1G19050.1	16965536
AT3G29350.1	Bra025708.1-P	AT1G19050.1	16965536
AT3G29350.1	Bra016526.1-P	AT1G19050.1	18642946
AT3G29350.1	Bra025708.1-P	AT1G19050.1	18642946
AT3G29350.1	Bra016526.1-P	AT1G19050.1	21798944
AT3G29350.1	Bra025708.1-P	AT1G19050.1	21798944
AT3G29350.1	Bra030037.1-P	AT1G27320.1	16965536
AT3G29350.1	Bra004160.1-P	AT1G66340.1	10930573
AT3G29350.1	Bra002095.1-P	AT2G17820.1	10930573
AT3G29350.1	Bra000224.1-P	AT2G41310.1	16965536
AT3G29350.1	Bra016943.1-P	AT2G41310.1	16965536
AT3G29350.1	Bra032761.1-P	AT2G47430.1	10930573
AT3G29350.1	Bra023796.1-P	AT3G22880.1	17937504
AT3G29350.1	Bra018084.1-P	AT3G48100.1	16965536
AT3G29350.1	Bra019524.1-P	AT3G48100.1	16965536
AT3G29350.1	Bra033773.1-P	AT3G48100.1	16965536
AT3G29350.1	Bra018084.1-P	AT3G48100.1	18642946
AT3G29350.1	Bra019524.1-P	AT3G48100.1	18642946
AT3G29350.1	Bra033773.1-P	AT3G48100.1	18642946
AT3G29350.1	Bra003265.1-P	AT3G57040.1	10930573
AT3G29350.1	Bra007295.1-P	AT3G57040.1	10930573
AT3G29350.1	Bra014649.1-P	AT3G57040.1	10930573
AT3G29350.1	Bra003265.1-P	AT3G57040.1	16965536
AT3G29350.1	Bra007295.1-P	AT3G57040.1	16965536
AT3G29350.1	Bra014649.1-P	AT3G57040.1	16965536
AT3G29350.1	Bra003265.1-P	AT3G57040.1	18642946
AT3G29350.1	Bra007295.1-P	AT3G57040.1	18642946
AT3G29350.1	Bra014649.1-P	AT3G57040.1	18642946
AT3G29350.1	Bra013730.1-P	AT4G23750.1	21705390
AT3G29350.1	Bra019270.1-P	AT4G23750.1	21705390
AT3G29350.1	Bra024159.1-P	AT4G29170.1	17937504
AT3G29350.1	Bra002334.1-P	AT5G20850.1	17937504
AT3G29350.1	Bra006580.1-P	AT5G20850.1	17937504
AT3G29350.1	Bra035381.1-P	AT5G35750.1	16965536
AT3G29350.1	Bra035381.1-P	AT5G35750.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00096	Canola	cytosol	99.36	99.36
CDY19992	Canola	cytosol	99.36	99.36
Bra025394.1-P	Field mustard	cytosol	89.1	89.1
AT3G29350.1	Thale cress	cytosol	86.54	86.54
Bra033398.1-P	Field mustard	cytosol	69.23	69.23
Bra028236.1-P	Field mustard	cytosol	72.44	63.48
VIT_07s0104g00880.t01	Wine grape	cytosol, nucleus, plastid	58.97	60.93
PGSC0003DMT400051833	Potato	cytosol	55.13	56.58
KRG95451	Soybean	cytosol	46.15	54.96
KRH31957	Soybean	cytosol	53.21	54.61
Solyc06g084410.2.1	Tomato	cytosol	41.67	54.17
KRH71497	Soybean	cytosol, mitochondrion, nucleus	52.56	53.95
GSMUA_Achr11P...	Banana	cytosol	50.0	51.66
KRH67127	Soybean	cytosol	28.85	51.14
Bra023876.1-P	Field mustard	cytosol, nucleus, plastid	46.79	47.4
Bra027169.1-P	Field mustard	cytosol, nucleus, plastid	37.18	46.77
GSMUA_Achr7P14570_001	Banana	cytosol	42.95	44.08
GSMUA_AchrUn_...	Banana	cytosol	41.03	42.11
GSMUA_Achr7P14620_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.03	42.11
Bra003551.1-P	Field mustard	cytosol	38.46	38.96
Bra001629.1-P	Field mustard	cytosol	32.69	37.5

Protein Annotations

Gene3D:1.20.120.160	MapMan:11.4.2.2	EnsemblPlantsGene:Bra036215	EnsemblPlants:Bra036215.1	EnsemblPlants:Bra036215.1-P	GO:GO:0000160
GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641
UniProt:M4F559	PFAM:PF01627	PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF13	SUPFAM:SSF47226
InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI0002541DE4	:	:	:	:

Description

AT3G29350 (E=1e-075) AHP2 | AHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2); histidine phosphotransfer kinase/ protein binding / signal transducer

Coordinates

chrA09:-:2150694..2151753

Molecular Weight (calculated)

17420.9 Da

IEP (calculated)

4.736

GRAVY (calculated)

-0.172

Length

156 amino acids

Sequence
(BLAST)

001: MDAHVAQLQM QYRNYILSLY QQGFLDDQFT ELKSLQDDGS PDFVAEVLSL FFDDCVKLVG NMARALDQTG TVDFSQVGAN VHQLKGSSSS VGAKRVKGLC
101: INFKELCEAK NYEGCVRCLQ QVDIEYKTLK AKLQDMFNLE KQIVQAGGIV PQVDIN

Best Arabidopsis Sequence Match ( AT3G29350.1 )
(BLAST)

001: MDALIAQLQR QFRDYTISLY QQGFLDDQFT ELKKLQDDGS PDFVSEVLSL FFEDCVKLIS NMARALDTTG TVDFSQVGAS VHQLKGSSSS VGAKRVKTLC
101: VSFKECCEAK NYEGCVRCLQ QVDIEYKALK TKLQDMFNLE KQIIQAGGIV PQVDIN

Arabidopsis Description

AHP2AHP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VEN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.