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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 3
  • cytosol 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:endoplasmic reticulum
MultiLoc:cytosol
Plant-mPloc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra004160.1-P
Bra004449.1-P
Bra005778.1-P
Bra009514.1-P
Bra009539.1-P
Bra015303.1-P
Bra023756.1-P
Bra023876.1-P
Bra025394.1-P
Bra030564.1-P
Bra036215.1-P
Bra040134.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G66340.1 Bra015303.1-P AT1G04310.1 18577522
AT1G66340.1 Bra030564.1-P AT1G04310.1 18577522
AT1G66340.1 Bra004160.1-P AT1G66340.1 18384742
AT1G66340.1 Bra004160.1-P AT1G66340.1 18577522
AT1G66340.1 Bra004449.1-P AT2G40940.1 18577522
AT1G66340.1 Bra040134.1-P AT3G04580.1 18577522
AT1G66340.1 Bra023876.1-P AT3G21510.1 10930573
AT1G66340.1 Bra023876.1-P AT3G21510.1 18384742
AT1G66340.1 Bra023756.1-P AT3G23150.1 18577522
AT1G66340.1 Bra025394.1-P AT3G29350.1 10930573
AT1G66340.1 Bra036215.1-P AT3G29350.1 10930573
AT1G66340.1 Bra009539.1-P AT5G03280.1 19769567
AT1G66340.1 Bra005778.1-P AT5G03730.1 12837948
AT1G66340.1 Bra009514.1-P AT5G03730.1 12837948
AT1G66340.1 Bra005778.1-P AT5G03730.1 8417317
AT1G66340.1 Bra009514.1-P AT5G03730.1 8417317
AT1G66340.1 Bra005778.1-P AT5G03730.1 9560288
AT1G66340.1 Bra009514.1-P AT5G03730.1 9560288
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07498 Canola cytosol 99.86 99.86
AT1G66340.1 Thale cress plasma membrane 96.2 95.94
VIT_19s0093g00580.t01 Wine grape cytosol 83.15 82.59
KRH27542 Soybean cytosol 82.88 82.54
KRH36433 Soybean cytosol 82.34 81.89
PGSC0003DMT400071109 Potato cytosol, endoplasmic reticulum, plasma membrane 79.48 79.48
Solyc12g011330.2.1 Tomato endoplasmic reticulum, plasma membrane, plastid 81.25 79.31
PGSC0003DMT400020285 Potato endoplasmic reticulum, plasma membrane, plastid 80.98 79.05
Solyc07g056580.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 77.45 77.45
Bra004449.1-P Field mustard plasma membrane 55.43 66.78
Bra023756.1-P Field mustard plasma membrane 39.54 37.31
Bra040134.1-P Field mustard plasma membrane 37.5 36.03
Bra015303.1-P Field mustard endoplasmic reticulum 28.12 33.6
Bra009011.1-P Field mustard nucleus 20.11 16.48
Bra024849.1-P Field mustard cytosol, peroxisome, plasma membrane 22.55 15.96
Bra028573.1-P Field mustard nucleus 19.7 15.92
Bra010698.1-P Field mustard cytosol 7.07 15.76
Bra030037.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 21.6 15.63
Bra006075.1-P Field mustard nucleus 19.57 15.42
Bra013186.1-P Field mustard plasma membrane 22.15 14.86
Bra035381.1-P Field mustard cytosol, golgi, plasma membrane 21.47 13.75
Bra030564.1-P Field mustard plasma membrane 30.03 13.13
Bra032761.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 17.26 12.22
Bra002095.1-P Field mustard nucleus 17.93 11.06
Bra006074.1-P Field mustard cytosol 5.3 10.13
Protein Annotations
Gene3D:1.10.287.130MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300EnsemblPlantsGene:Bra004160
EnsemblPlants:Bra004160.1EnsemblPlants:Bra004160.1-PInterPro:CheY-like_superfamilyInterPro:ETRInterPro:GAFInterPro:GAF-like_dom_sf
GO:GO:0000155GO:GO:0000160GO:GO:0000166GO:GO:0002237GO:GO:0003674GO:GO:0003824
GO:GO:0004673GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0006464
GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009408GO:GO:0009605GO:GO:0009607GO:GO:0009625GO:GO:0009628
GO:GO:0009651GO:GO:0009690GO:GO:0009719GO:GO:0009723GO:GO:0009727GO:GO:0009733
GO:GO:0009737GO:GO:0009739GO:GO:0009791GO:GO:0009873GO:GO:0009987GO:GO:0010087
GO:GO:0010105GO:GO:0010119GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0016772GO:GO:0018106GO:GO:0019538GO:GO:0023014
GO:GO:0038023GO:GO:0038199GO:GO:0042742GO:GO:0042802GO:GO:0046872GO:GO:0050665
GO:GO:0050896GO:GO:0051301GO:GO:0051740GO:GO:0052544GO:GO:0071281GO:GO:1900140
InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:HisK_dim/P_sfInterPro:His_kinase_domInterPro:IPR001789
InterPro:IPR005467InterPro:IPR029016InterPro:IPR036890UniProt:M4CIX6PFAM:PF00072PFAM:PF00512
PFAM:PF01590PFAM:PF02518PIRSF:PIRSF026389PRINTS:PR00344PFscan:PS50109PFscan:PS50110
PANTHER:PTHR24423PANTHER:PTHR24423:SF598SMART:SM00065SMART:SM00387SMART:SM00388SMART:SM00448
SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55781SUPFAM:SSF55874InterPro:Sig_transdc_His_kin-like_CInterPro:Sig_transdc_resp-reg_receiver
TMHMM:TMhelixUniParc:UPI00025414F4SEG:seg:::
Description
AT1G66340 (E=0.0) ETR1, EIN1, ETR | ETR1 (ETHYLENE RESPONSE 1); ethylene binding / protein histidine kinase/ two-component response regulator
Coordinates
chrA07:+:17139081..17141978
Molecular Weight (calculated)
82290.2 Da
IEP (calculated)
7.828
GRAVY (calculated)
0.141
Length
736 amino acids
Sequence
(BLAST)
001: MMEVCNCIEP QWPADELLMK YQYISDFFIA VAYFSIPLEL IYFVKKSAVF PYRWVLVQFG AFIVLCGATH LINLWTFTTH SRTVALVMTT AKVLTAVVSC
101: ATALMLVHII PDLLSVKTRE LFLKNKAAEL DREMGLIRTQ EETGRHVRML THEIRSTLDR HTILKTTLVE LGRTLALEEC ALWMPTRTGL ELQLSYTLRQ
201: QHPVEYTVPI QLPVINQVFG TSRAVKISPN SPVARLRPVS GKYLLGEVVA VRVPLLHLSN FQINDWPELS TKRYALMVLM LPSDSARQWH VHELELVEVV
301: ADQVAVALSH AAILEESMRA RDLLMEQNVA LDIARREAET AIRARNDFLA VMNHEMRTPM HAIIALSSLL QETELTPEQR LMVETVLKSS SLLATLMNDV
401: LDLSRLEDGS LQLELGTFNL HTLFREVLNL IKPIAVVKKL PITLNLAPDL PEFVVGDEKR LMQIILNIVG NAVKFSKQGS ISVTALVTKS DNRAPPDFFV
501: VPTGSHFYLR VKVKDLGAGI NPQDIPKLFT KFAQTQSLAT RSSGGSGLGL AISKRFVNLM EGNIWIESEG VGKGCTAIFD VKLGISNESK QSGIPKVPAN
601: PQHVNFAGLK VLVMDENGVS RMVTKGLLVH LGCEVATVSS SEECLRVVSH EHRVVFMDVC TPGVENYQIA LRIHEKFTKR HQRPLLVALT GNTDKSTKER
701: CMSFGLDGVL LKPVSLDNMR NVLSDLLEHR VLYEAM
Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)
001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM
Arabidopsis Description
ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.