Factsheet for Bra002095.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra025394.1-P
Bra036215.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17820.1	Bra025394.1-P	AT3G29350.1	10930573
AT2G17820.1	Bra036215.1-P	AT3G29350.1	10930573

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24380	Canola	nucleus	99.67	99.67
AT2G17820.1	Thale cress	cytosol, nucleus, plasma membrane	88.19	87.24
Solyc02g083670.2.1	Tomato	cytosol	5.36	85.33
Solyc02g083680.1.1	Tomato	plastid	48.74	66.21
VIT_04s0023g03680.t01	Wine grape	mitochondrion	67.0	64.78
KRH76639	Soybean	cytosol, endoplasmic reticulum, plasma membrane	66.25	63.43
KRH08036	Soybean	plastid	64.32	62.9
KRH28811	Soybean	cytosol, endoplasmic reticulum, nucleus	65.41	62.78
KRH69761	Soybean	plastid	63.9	62.23
PGSC0003DMT400009219	Potato	plastid	63.07	62.18
Bra032761.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	19.93	22.91
Bra030037.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	17.42	20.45
Bra024849.1-P	Field mustard	cytosol, peroxisome, plasma membrane	17.09	19.62
Bra013186.1-P	Field mustard	plasma membrane	17.92	19.51
Bra035381.1-P	Field mustard	cytosol, golgi, plasma membrane	17.67	18.36
Bra004160.1-P	Field mustard	cytosol	11.06	17.93
Bra028573.1-P	Field mustard	nucleus	13.65	17.89
Bra004449.1-P	Field mustard	plasma membrane	9.13	17.84
Bra009011.1-P	Field mustard	nucleus	13.23	17.59
Bra006075.1-P	Field mustard	nucleus	13.48	17.24
Bra040134.1-P	Field mustard	plasma membrane	10.8	16.84
Bra023756.1-P	Field mustard	plasma membrane	10.39	15.9
Bra010698.1-P	Field mustard	cytosol	4.19	15.15
Bra015303.1-P	Field mustard	endoplasmic reticulum	6.28	12.18
Bra006074.1-P	Field mustard	cytosol	3.52	10.91
Bra030564.1-P	Field mustard	plasma membrane	7.29	5.17

Protein Annotations

Gene3D:1.10.287.130	Gene3D:3.30.565.10	Gene3D:3.40.50.2300	MapMan:35.1	EnsemblPlantsGene:Bra002095	EnsemblPlants:Bra002095.1
EnsemblPlants:Bra002095.1-P	InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000003	GO:GO:0000155	GO:GO:0000160
GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005034	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006970	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009414	GO:GO:0009628
GO:GO:0009791	GO:GO:0009927	GO:GO:0009987	GO:GO:0010375	GO:GO:0010431	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538
GO:GO:0023014	GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf
InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR036890	UniProt:M4CD14	PFAM:PF00072
PFAM:PF00512	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PANTHER:PTHR43711
PANTHER:PTHR43711:SF1	SMART:SM00387	SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384	SUPFAM:SSF52172
SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI0002543D10	SEG:seg

Description

AT2G17820 (E=0.0) ATHK1, AHK1 | ATHK1 (histidine kinase 1); histidine phosphotransfer kinase/ osmosensor/ protein histidine kinase

Coordinates

chrA10:+:11525400..11531035

Molecular Weight (calculated)

133993.0 Da

IEP (calculated)

6.600

GRAVY (calculated)

-0.226

Length

1194 amino acids

Sequence
(BLAST)

0001: MQRDSFSVSI ESLPDSPMGP RKKKITKLFD NMTEWVTPWR SNPESPRETR IIRGDVEQEQ FQYASSHCLS SYYSVFVVRL AIMVMLAILI GLLTILTWHF
0101: TRIYTKQSLQ NLATGLRYEL LQRPILRMWS VLNTTSELTT AQVKLSEYVI KKYDKPTTQE ELVEMYQAMK DVTWALFASA KALNAITINY RNGFVQAFHR
0201: DPASSSTFYI YSDLKNYSIS ETTGLEDVKM SMGHGWNNQT IHGNMTAIWY QQQLDPITGA KLGKPLQIPP DDLINIAGIS QVPDGEASWH VTVSKYMDSP
0301: LLSAALPVFD ASNKSIVAVV GVTTSLYSVG QLMRELVEVH GGHIYLTSQE GYLLATSTDG PLLTNTSRGP KLMKAVDSKE WAIKTGAHWL EKTYGSHLPD
0401: VVHADNARLG DQQYYLDSFY LNLKRLPIIG VVIIPRKFIM GKVDERAFKT LVILISASVC IFFIGCVCIL ILTNGVSKEM KLRAELIRQL DARRRAEASS
0501: NYKSQFLANM SHELRTPMAA VIGLLDILIS DDCLSNEQYA TVTQIRKCST ALLRLLNNIL DLSKVESGKL VLEEAEFDLG RELEGLVDMF SVQCINHNVE
0601: TVLDLSDDMP TLVRGDSARL VQIFANLISN SIKFTTTGHI ILRGWCDSVS SLHDEMSLTV DRKKPWAPVK TKLVHHRNHL HKSCKNENKI VLWFEVDDTG
0701: CGIDPSKWDS VFESFEQADP STTRTHGGTG LGLCIVRNLV NKMGGDIKVV QKNGRGTIMR LHLILSIPDN AEQIYQPEFS QYGLVVLLSM SGSTARSIQS
0801: KWLRKHGIAT VEASDWNVLT QIIRDLFETG SRENSFDSQH TIAESLRAEL SNTQEIRNPV FVIVVDIGVL DLTTDIWKEQ LNYLDRFSSK AKFAWLLKHD
0901: TSNTVKTELR RKGHVMMVNK PLYKAKMIQI LEAVIKNRKR GLRGNGSDES HDCLEIDPTQ FDTCSSDDSS ENTSLKPTAL PSPVIKNYLL DITKSNDEST
1001: SMTQKKKEEE EEDWKDRSNR LYSGVALDGK NQKSLEGVRI LLAEDTPVLQ RVATIMLEKM GATVTAVWDG QQAVDALNYK SINAQEHNNL SEEEETNPQS
1101: DTPNSSPYDL ILMDCQMPKM DGYEATKAIR RAEIGTSLHV PIVALTAHAM SSDEAKCLEV GMDAYLTKPI DRKLMVSTIL SLTKPSTVLT SFSD

Best Arabidopsis Sequence Match ( AT2G17820.1 )
(BLAST)

0001: MRGDSFSMSI ENLPDSPMGS RKKKMQIRKV FDKMTEWVTP WRSNLESPRE MMILRGDVEQ DEFQYASSHC LSSYYSVFVV RLAIMVMLAI LIGLLTVLTW
0101: HFTRIYTKQS LQTLAYGLRY ELLQRPVLRM WSVLNTTSEL TTAQVKLSEY VIKKYDKPTT QEELVEMYQA MKDVTWALFA SAKALNAITI NYRNGFVQAF
0201: HRDPASSSTF YIFSDLKNYS ISGTGPEDVS GWNNKSIHGN MSAIWYQQQL DPVTGENLGK PLKIPPDDLI NIAGISQVPD GEASWHVTVS KYMDSPLLSA
0301: ALPVFDASNK SIVAVVGVTT ALYSVGQLMR DLVEVHGGHI YLTSQEGYLL ATSTDGPLLK NTSNGPQLMK ATDSEEWVIK SGAQWLEKTY GSKRPHVVHA
0401: ENVKLGDQRY YIDSFYLNLK RLPIVGVVII PRKFIMGKVD ERAFKTLIIL ISASVCIFFI GCVCILILTN GVSKEMKLRA ELIRQLDARR RAEASSNYKS
0501: QFLANMSHEL RTPMAAVIGL LDILISDDCL SNEQYATVTQ IRKCSTALLR LLNNILDLSK VESGKLVLEE AEFDLGRELE GLVDMFSVQC INHNVETVLD
0601: LSDDMPALVR GDSARLVQIF ANLISNSIKF TTTGHIILRG WCENINSLHD EMSVSVDRRK PWAPMKTKQV QHRNHLQKSC KNANKMVLWF EVDDTGCGID
0701: PSKWDSVFES FEQADPSTTR THGGTGLGLC IVRNLVNKMG GEIKVVQKNG LGTLMRLYLI LSTPDTVDQN IQPDFSKYGL VVMLSMYGST ARMITSKWLR
0801: KHGIATVEAS DWNELTQIIR DLLETGSRDN SFDSQHNISD PLRAELSNIV EIKNPVFVIV VDIGVLDLTT NIWKEQLNYL DRFSNKAKFA WLLKHDTSNT
0901: VKTELRRKGH VMMVNKPLYK AKMIQILEAV IKNRKRGLCN DLRNRGNGSD ESHDCLEIDP TQFDTCSSDD SSETSGEKQV DKSVKPSTLH SPVLKNYLID
1001: ATTSNDDSTS ASMTQKNPEE EDWKDRLYSG IALDGKNQKS LEGIRILLAE DTPVLQRVAT IMLEKMGATV TAVWDGQQAV DSLNYKSINA QAPTEEHKSF
1101: EEETANKVTT RETSLRNSSP YDLILMDCQM PKMDGYEATK AIRRAEIGTE LHIPIVALTA HAMSSDEAKC LEVGMDAYLT KPIDRKLMVS TILSLTKPSA
1201: FQTSLSA

Arabidopsis Description

AHK1Histidine kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXL4]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.