Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_07s0104g00880.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17820.1 | VIT_07s0104g00880.t01 | AT3G29350.1 | 10930573 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g083670.2.1 | Tomato | cytosol | 5.43 | 89.33 |
| Solyc02g083680.1.1 | Tomato | plastid | 52.79 | 74.18 |
| KRH08036 | Soybean | plastid | 69.88 | 70.68 |
| PGSC0003DMT400009219 | Potato | plastid | 69.15 | 70.52 |
| KRH28811 | Soybean | cytosol, endoplasmic reticulum, nucleus | 70.93 | 70.42 |
| KRH69761 | Soybean | plastid | 69.55 | 70.07 |
| KRH76639 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 70.69 | 70.01 |
| CDY20843 | Canola | nucleus | 65.18 | 67.48 |
| AT2G17820.1 | Thale cress | cytosol, nucleus, plasma membrane | 65.91 | 67.44 |
| CDY24380 | Canola | nucleus | 64.94 | 67.17 |
| Bra002095.1-P | Field mustard | nucleus | 64.78 | 67.0 |
| VIT_07s0005g01380.t01 | Wine grape | plasma membrane | 19.92 | 22.49 |
| VIT_01s0010g03780.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 17.81 | 21.17 |
| VIT_01s0011g06190.t01 | Wine grape | mitochondrion | 17.49 | 20.59 |
| VIT_04s0008g03460.t01 | Wine grape | plastid | 5.18 | 19.05 |
| VIT_19s0093g00580.t01 | Wine grape | cytosol | 10.93 | 18.22 |
| VIT_04s0069g00750.t01 | Wine grape | nucleus | 12.39 | 18.09 |
| VIT_12s0057g00690.t01 | Wine grape | endoplasmic reticulum, golgi | 17.41 | 16.9 |
| VIT_14s0081g00630.t01 | Wine grape | plasma membrane | 10.28 | 16.71 |
| VIT_07s0005g00850.t01 | Wine grape | cytosol | 8.58 | 16.67 |
| VIT_05s0049g00090.t01 | Wine grape | plasma membrane | 9.64 | 15.58 |
| VIT_06s0004g05240.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 4.62 | 10.34 |
Protein Annotations
| Gene3D:1.10.287.130 | EntrezGene:100247100 | wikigene:100247100 | Gene3D:3.30.565.10 | Gene3D:3.40.50.2300 | MapMan:35.1 |
| ProteinID:CCB44347 | ProteinID:CCB44347.1 | InterPro:CheY-like_superfamily | UniProt:F6GWL2 | EMBL:FN594959 | GO:GO:0000003 |
| GO:GO:0000155 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0005034 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0006950 |
| GO:GO:0006970 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009927 | GO:GO:0009987 | GO:GO:0010375 |
| GO:GO:0010431 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 |
| GO:GO:0016772 | GO:GO:0019538 | GO:GO:0023014 | GO:GO:0038023 | InterPro:HATPase_C | InterPro:HATPase_C_sf |
| InterPro:HisK_dim/P | InterPro:HisK_dim/P_sf | InterPro:His_kinase_dom | InterPro:IPR001789 | InterPro:IPR005467 | InterPro:IPR036890 |
| EntrezGene:LOC100247100 | wikigene:LOC100247100 | PFAM:PF00072 | PFAM:PF00512 | PFAM:PF02518 | PRINTS:PR00344 |
| PFscan:PS50109 | PFscan:PS50110 | PANTHER:PTHR43711 | PANTHER:PTHR43711:SF1 | SMART:SM00387 | SMART:SM00388 |
| SMART:SM00448 | SUPFAM:SSF47384 | SUPFAM:SSF52172 | SUPFAM:SSF55874 | InterPro:Sig_transdc_His_kin-like_C | InterPro:Sig_transdc_resp-reg_receiver |
| TMHMM:TMhelix | UniParc:UPI000198306B | ArrayExpress:VIT_04s0023g03680 | EnsemblPlantsGene:VIT_04s0023g03680 | EnsemblPlants:VIT_04s0023g03680.t01 | unigene:Vvi.25471 |
| RefSeq:XP_002265248 | RefSeq:XP_002265248.1 | RefSeq:XP_019075174.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4:+:20226445..20235895
Molecular Weight (calculated)
138609.0 Da
IEP (calculated)
8.172
GRAVY (calculated)
-0.201
Length
1235 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSHLRRVFN RISGFVSPWR RNQAPHGRRI FHREVQQEEF QYPSNSCLSS YYSVFVARLA IMVMLAILIG LLTILTWHFT RIYTTKSINS LAYGLRYELL
0101: QRPILRMWNI LNSTVEITTA QVKLSEYVIK RYSKPTTQAQ QVELYEVMRD VTWALFASRK ALNAITINYR NGFVQAFHRD HRSNNTFYIF SDLVNYSISG
0201: SYNSNTLSSH QGWNDQSIHS NISAIWYHVP LDPVSGERIG KPKAIPPDDQ INIAGLSQVP DGVASWHVAV SKYTDSPLLS AALPVWDPSN QSIVAVVGVT
0301: TALYSVGQLM KELVEVHSGH IYLTSQEGYL LATSTNAPLL TNSSTGPKLM LAIDSEDRVI RLGAEWLQRT YGYKFPPSHV VHVENAKLGH EHYYIDSFFL
0401: NLKRLPMVGV IIIPRKYIMG KVEERALKTL IILISASLCI LVIGCVCILI LTNGVSKEMK LRAELISHLD ARRRAEASSN YKSQFLANMS HELRTPMAAV
0501: IGLLDILICD DCLTNEQYAT VTQIRKCSTA LLRLLNNILD ISKVESGKLV LEDAEFDLGR ELEGLVDMFS VQCINHNVET VLDLSDDMPK LVRGDSARVV
0601: QIFANLISNS IKFTTSGHII LRGWCENSNA YGNSGKFPLN QKASRSALKA KFKQHRNHAK RACKKNNKMT LWFEVDDTGC GIDPSKWESV FESFEQADPS
0701: TTRTHGGTGL GLCIVRTLVN KMGGEIKVVK KNSPGTIMQL YLLLNTPIEG AGQHCQLEFG EHSLVVLLAL SGSMGRLIMS QWLRKNGVFT WEASEWNELT
0801: QILGQLFRAR SSVPNGGLVM QCLPSEPLKT EAPNIQDTRA SVFVIIVDIG LLDWSTDIWR EQLNFLDKYH GKARFAWILN HDTSNFIKME LRRKGHLLMV
0901: NKPLYKSKVV HILEAVIKGR DLEMQGRILN GLKSTRIEGN LHESLEIDST HFEEVPSSDD SDRSEMGSHK SINAYHIAEK QKDRIRKPCP SQYQTANSCL
1001: VEFTQVYSTE NNLRTEDPHQ IRPNSHDAGN EGHKLMCNKS TSPLTEAECE NCRGQEQHLI STCPKEHGNS YSGKTVNGQK SLEGLRILLA EDTPVLQRVA
1101: TIMLEKMGAT VIAVGDGLQA VDALKCMPGA EESRGKCLLQ DGRTRCQTQI HDSLPYDLIL MDCQMPKMDG YEATKTIRKS EEGTSLHIPI VALTAHAMSS
1201: DEAKCLEVGM DAYLTKPIDY RLMVSTILSL TKRMA
0101: QRPILRMWNI LNSTVEITTA QVKLSEYVIK RYSKPTTQAQ QVELYEVMRD VTWALFASRK ALNAITINYR NGFVQAFHRD HRSNNTFYIF SDLVNYSISG
0201: SYNSNTLSSH QGWNDQSIHS NISAIWYHVP LDPVSGERIG KPKAIPPDDQ INIAGLSQVP DGVASWHVAV SKYTDSPLLS AALPVWDPSN QSIVAVVGVT
0301: TALYSVGQLM KELVEVHSGH IYLTSQEGYL LATSTNAPLL TNSSTGPKLM LAIDSEDRVI RLGAEWLQRT YGYKFPPSHV VHVENAKLGH EHYYIDSFFL
0401: NLKRLPMVGV IIIPRKYIMG KVEERALKTL IILISASLCI LVIGCVCILI LTNGVSKEMK LRAELISHLD ARRRAEASSN YKSQFLANMS HELRTPMAAV
0501: IGLLDILICD DCLTNEQYAT VTQIRKCSTA LLRLLNNILD ISKVESGKLV LEDAEFDLGR ELEGLVDMFS VQCINHNVET VLDLSDDMPK LVRGDSARVV
0601: QIFANLISNS IKFTTSGHII LRGWCENSNA YGNSGKFPLN QKASRSALKA KFKQHRNHAK RACKKNNKMT LWFEVDDTGC GIDPSKWESV FESFEQADPS
0701: TTRTHGGTGL GLCIVRTLVN KMGGEIKVVK KNSPGTIMQL YLLLNTPIEG AGQHCQLEFG EHSLVVLLAL SGSMGRLIMS QWLRKNGVFT WEASEWNELT
0801: QILGQLFRAR SSVPNGGLVM QCLPSEPLKT EAPNIQDTRA SVFVIIVDIG LLDWSTDIWR EQLNFLDKYH GKARFAWILN HDTSNFIKME LRRKGHLLMV
0901: NKPLYKSKVV HILEAVIKGR DLEMQGRILN GLKSTRIEGN LHESLEIDST HFEEVPSSDD SDRSEMGSHK SINAYHIAEK QKDRIRKPCP SQYQTANSCL
1001: VEFTQVYSTE NNLRTEDPHQ IRPNSHDAGN EGHKLMCNKS TSPLTEAECE NCRGQEQHLI STCPKEHGNS YSGKTVNGQK SLEGLRILLA EDTPVLQRVA
1101: TIMLEKMGAT VIAVGDGLQA VDALKCMPGA EESRGKCLLQ DGRTRCQTQI HDSLPYDLIL MDCQMPKMDG YEATKTIRKS EEGTSLHIPI VALTAHAMSS
1201: DEAKCLEVGM DAYLTKPIDY RLMVSTILSL TKRMA
0001: MRGDSFSMSI ENLPDSPMGS RKKKMQIRKV FDKMTEWVTP WRSNLESPRE MMILRGDVEQ DEFQYASSHC LSSYYSVFVV RLAIMVMLAI LIGLLTVLTW
0101: HFTRIYTKQS LQTLAYGLRY ELLQRPVLRM WSVLNTTSEL TTAQVKLSEY VIKKYDKPTT QEELVEMYQA MKDVTWALFA SAKALNAITI NYRNGFVQAF
0201: HRDPASSSTF YIFSDLKNYS ISGTGPEDVS GWNNKSIHGN MSAIWYQQQL DPVTGENLGK PLKIPPDDLI NIAGISQVPD GEASWHVTVS KYMDSPLLSA
0301: ALPVFDASNK SIVAVVGVTT ALYSVGQLMR DLVEVHGGHI YLTSQEGYLL ATSTDGPLLK NTSNGPQLMK ATDSEEWVIK SGAQWLEKTY GSKRPHVVHA
0401: ENVKLGDQRY YIDSFYLNLK RLPIVGVVII PRKFIMGKVD ERAFKTLIIL ISASVCIFFI GCVCILILTN GVSKEMKLRA ELIRQLDARR RAEASSNYKS
0501: QFLANMSHEL RTPMAAVIGL LDILISDDCL SNEQYATVTQ IRKCSTALLR LLNNILDLSK VESGKLVLEE AEFDLGRELE GLVDMFSVQC INHNVETVLD
0601: LSDDMPALVR GDSARLVQIF ANLISNSIKF TTTGHIILRG WCENINSLHD EMSVSVDRRK PWAPMKTKQV QHRNHLQKSC KNANKMVLWF EVDDTGCGID
0701: PSKWDSVFES FEQADPSTTR THGGTGLGLC IVRNLVNKMG GEIKVVQKNG LGTLMRLYLI LSTPDTVDQN IQPDFSKYGL VVMLSMYGST ARMITSKWLR
0801: KHGIATVEAS DWNELTQIIR DLLETGSRDN SFDSQHNISD PLRAELSNIV EIKNPVFVIV VDIGVLDLTT NIWKEQLNYL DRFSNKAKFA WLLKHDTSNT
0901: VKTELRRKGH VMMVNKPLYK AKMIQILEAV IKNRKRGLCN DLRNRGNGSD ESHDCLEIDP TQFDTCSSDD SSETSGEKQV DKSVKPSTLH SPVLKNYLID
1001: ATTSNDDSTS ASMTQKNPEE EDWKDRLYSG IALDGKNQKS LEGIRILLAE DTPVLQRVAT IMLEKMGATV TAVWDGQQAV DSLNYKSINA QAPTEEHKSF
1101: EEETANKVTT RETSLRNSSP YDLILMDCQM PKMDGYEATK AIRRAEIGTE LHIPIVALTA HAMSSDEAKC LEVGMDAYLT KPIDRKLMVS TILSLTKPSA
1201: FQTSLSA
0101: HFTRIYTKQS LQTLAYGLRY ELLQRPVLRM WSVLNTTSEL TTAQVKLSEY VIKKYDKPTT QEELVEMYQA MKDVTWALFA SAKALNAITI NYRNGFVQAF
0201: HRDPASSSTF YIFSDLKNYS ISGTGPEDVS GWNNKSIHGN MSAIWYQQQL DPVTGENLGK PLKIPPDDLI NIAGISQVPD GEASWHVTVS KYMDSPLLSA
0301: ALPVFDASNK SIVAVVGVTT ALYSVGQLMR DLVEVHGGHI YLTSQEGYLL ATSTDGPLLK NTSNGPQLMK ATDSEEWVIK SGAQWLEKTY GSKRPHVVHA
0401: ENVKLGDQRY YIDSFYLNLK RLPIVGVVII PRKFIMGKVD ERAFKTLIIL ISASVCIFFI GCVCILILTN GVSKEMKLRA ELIRQLDARR RAEASSNYKS
0501: QFLANMSHEL RTPMAAVIGL LDILISDDCL SNEQYATVTQ IRKCSTALLR LLNNILDLSK VESGKLVLEE AEFDLGRELE GLVDMFSVQC INHNVETVLD
0601: LSDDMPALVR GDSARLVQIF ANLISNSIKF TTTGHIILRG WCENINSLHD EMSVSVDRRK PWAPMKTKQV QHRNHLQKSC KNANKMVLWF EVDDTGCGID
0701: PSKWDSVFES FEQADPSTTR THGGTGLGLC IVRNLVNKMG GEIKVVQKNG LGTLMRLYLI LSTPDTVDQN IQPDFSKYGL VVMLSMYGST ARMITSKWLR
0801: KHGIATVEAS DWNELTQIIR DLLETGSRDN SFDSQHNISD PLRAELSNIV EIKNPVFVIV VDIGVLDLTT NIWKEQLNYL DRFSNKAKFA WLLKHDTSNT
0901: VKTELRRKGH VMMVNKPLYK AKMIQILEAV IKNRKRGLCN DLRNRGNGSD ESHDCLEIDP TQFDTCSSDD SSETSGEKQV DKSVKPSTLH SPVLKNYLID
1001: ATTSNDDSTS ASMTQKNPEE EDWKDRLYSG IALDGKNQKS LEGIRILLAE DTPVLQRVAT IMLEKMGATV TAVWDGQQAV DSLNYKSINA QAPTEEHKSF
1101: EEETANKVTT RETSLRNSSP YDLILMDCQM PKMDGYEATK AIRRAEIGTE LHIPIVALTA HAMSSDEAKC LEVGMDAYLT KPIDRKLMVS TILSLTKPSA
1201: FQTSLSA
Arabidopsis Description
AHK1Histidine kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXL4]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.