Factsheet for VIT_05s0049g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0049g00090.t01
VIT_08s0007g03910.t01
VIT_19s0093g00580.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04310.1	VIT_05s0049g00090.t01	AT1G04310.1	18577522
AT1G04310.1	VIT_19s0093g00580.t01	AT1G66340.1	18577522
AT3G23150.1	VIT_19s0093g00580.t01	AT1G66340.1	18577522
AT3G23150.1	VIT_08s0007g03910.t01	AT5G03730.1	12177468

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90373	Soybean	plasma membrane	43.98	73.52
KRH34517	Soybean	plasma membrane	70.42	73.0
KRG92290	Soybean	plasma membrane	72.51	72.7
PGSC0003DMT400041983	Potato	plasma membrane	70.55	70.83
VIT_14s0081g00630.t01	Wine grape	plasma membrane	70.42	70.79
Solyc06g053710.2.1	Tomato	plasma membrane	70.42	70.7
KRG90374	Soybean	cytosol	20.16	68.75
CDY70443	Canola	plasma membrane	64.4	63.08
Bra023756.1-P	Field mustard	plasma membrane	64.27	62.95
CDY35503	Canola	plasma membrane	64.01	62.77
AT3G23150.1	Thale cress	endoplasmic reticulum, plasma membrane	62.43	61.71
GSMUA_Achr11P...	Banana	plasma membrane	59.95	60.42
PGSC0003DMT400044244	Potato	plasma membrane	57.85	58.7
GSMUA_Achr8P14350_001	Banana	endoplasmic reticulum	57.98	58.52
Solyc09g089610.2.1	Tomato	endoplasmic reticulum	56.68	57.43
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	46.07	53.99
Bra015303.1-P	Field mustard	endoplasmic reticulum	43.46	53.9
CDY67999	Canola	plasma membrane	43.46	53.63
TraesCS2D01G000500.1	Wheat	plasma membrane	54.45	53.61
TraesCS2B01G023800.1	Wheat	plasma membrane	53.93	53.58
CDY70681	Canola	endoplasmic reticulum	43.19	53.48
CDX86641	Canola	endoplasmic reticulum	41.62	53.45
HORVU0Hr1G001750.2	Barley	endoplasmic reticulum	54.32	53.41
TraesCS2A01G000200.1	Wheat	plasma membrane	54.32	53.34
EES10426	Sorghum	plasma membrane	53.8	53.17
Os04t0169100-02	Rice	plasma membrane	52.88	52.95
HORVU2Hr1G000030.1	Barley	plasma membrane	53.66	52.9
Zm00001d004372_P003	Maize	plasma membrane	52.62	52.21
Zm00001d051889_P002	Maize	endoplasmic reticulum	51.18	51.86
AT1G04310.1	Thale cress	endoplasmic reticulum	43.72	51.78
OQU85974	Sorghum	plasma membrane	51.7	50.9
TraesCS6D01G383600.1	Wheat	mitochondrion	52.23	50.89
TraesCS6B01G439600.1	Wheat	mitochondrion	52.09	50.77
Zm00001d025050_P001	Maize	cytosol, golgi, plasma membrane	53.27	50.62
TraesCS6A01G399400.2	Wheat	mitochondrion, plasma membrane	51.96	49.07
HORVU6Hr1G091700.6	Barley	cytosol, mitochondrion, plasma membrane	51.83	48.18
HORVU6Hr1G080170.1	Barley	plasma membrane	11.65	47.34
Os02t0820900-03	Rice	mitochondrion	51.44	47.01
TraesCS6D01G266200.1	Wheat	plasma membrane	41.62	43.8
TraesCS6B01G360200.1	Wheat	cytosol, endoplasmic reticulum, golgi	41.49	43.54
TraesCS6A01G329400.1	Wheat	plasma membrane	41.49	43.42
TraesCS6A01G285800.1	Wheat	plasma membrane	41.36	43.41
TraesCS6D01G308300.1	Wheat	plasma membrane	41.1	43.13
HORVU6Hr1G080180.1	Barley	cytosol	27.88	42.35
TraesCS6B01G314600.1	Wheat	plasma membrane	40.31	42.25
HORVU6Hr1G071860.2	Barley	plasma membrane	39.79	42.11
Os07t0259100-01	Rice	mitochondrion, plasma membrane	40.84	40.15
VIT_19s0093g00580.t01	Wine grape	cytosol	38.87	40.08
VIT_06s0004g05240.t01	Wine grape	endoplasmic reticulum, plasma membrane	28.8	39.93
VIT_07s0005g00850.t01	Wine grape	cytosol	32.2	38.68
EES06508	Sorghum	mitochondrion, plasma membrane	39.92	36.88
Zm00001d053594_P001	Maize	plasma membrane	38.48	36.61
KXG36402	Sorghum	plasma membrane	40.31	36.02
Zm00001d021687_P001	Maize	plasma membrane	38.61	34.5
Bra030564.1-P	Field mustard	plasma membrane	48.3	21.93
CDY15498	Canola	plasma membrane	48.82	21.81
VIT_04s0008g03460.t01	Wine grape	plastid	6.28	14.29
VIT_01s0010g03780.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	19.24	14.15
VIT_01s0011g06190.t01	Wine grape	mitochondrion	18.59	13.54
VIT_04s0069g00750.t01	Wine grape	nucleus	14.01	12.65
VIT_12s0057g00690.t01	Wine grape	endoplasmic reticulum, golgi	19.76	11.87
VIT_04s0023g03680.t01	Wine grape	mitochondrion	15.58	9.64
VIT_07s0005g01380.t01	Wine grape	plasma membrane	13.74	9.6

Protein Annotations

Gene3D:1.10.287.130	EntrezGene:100254638	wikigene:100254638	MapMan:11.5.2.1	Gene3D:3.30.450.40	Gene3D:3.30.565.10
Gene3D:3.40.50.2300	EMBL:AM485287	ProteinID:CAN84042	ProteinID:CAN84042.1	ProteinID:CCB48516	ProteinID:CCB48516.1
InterPro:CheY-like_superfamily	ncoils:Coil	InterPro:ETR	UniProt:F6H8H3	EMBL:FN595496	InterPro:GAF
InterPro:GAF-like_dom_sf	GO:GO:0000155	GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004673	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009873
GO:GO:0009987	GO:GO:0010105	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0018106	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	GO:GO:0038199
GO:GO:0046872	GO:GO:0050896	GO:GO:0051740	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P
InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR029016	InterPro:IPR036890
EntrezGene:LOC100254638	wikigene:LOC100254638	PFAM:PF00072	PFAM:PF00512	PFAM:PF01590	PFAM:PF02518
PIRSF:PIRSF026389	PFscan:PS50109	PFscan:PS50110	PANTHER:PTHR43719	PANTHER:PTHR43719:SF6	SMART:SM00065
SMART:SM00388	SMART:SM00448	SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55781	SUPFAM:SSF55874
InterPro:Sig_transdc_resp-reg_receiver	SignalP:SignalP-TM	TIGR:TC52433	TMHMM:TMhelix	UniParc:UPI0001983430	ArrayExpress:VIT_05s0049g00090
EnsemblPlantsGene:VIT_05s0049g00090	EnsemblPlants:VIT_05s0049g00090.t01	RefSeq:XP_002284507	RefSeq:XP_002284507.1	SEG:seg	:

Description

Ethylene receptor [Source:UniProtKB/TrEMBL;Acc:F6H8H3]

Coordinates

chr5:+:7140149..7144177

Molecular Weight (calculated)

84834.5 Da

IEP (calculated)

7.816

GRAVY (calculated)

0.057

Length

764 amino acids

Sequence
(BLAST)

001: MLKRLAPGLL ISSLLISASA VDNSFPRCNC EDEGFWSVEN ILECQKVSDF LIAVAYFSIP IELLYFVSCS NVPFKWVLFQ FIAFIVLCGL THLLNGWTYG
101: PHPFQLMLAL TIFKFLTALV SCATAITLIT LIPLLLKVKV REFMLKKKTW DLGREVGIIK KKKEAGLHVR MLTHEIRKSL DRHTILHTTL VELSNTLDLQ
201: NCAVWMPNEN KTEMNLTHEL KGRNFYNFSI PINDPVVAMI KRSDEVHTLR TDSALATASS GTSGEPGPVA AIRMPMLRVS NFKGGTPELV QACYSILVLV
301: LKSGQARSWT SQELDIVKVV ADQVAVAVSH AAVLEESQLM RDQLAEQNRA LQQAKRNAMM ASQARNSFQK VMSDGMRRPM HSISGLLSMM QDEKLNSEQR
401: LIIDAMAKTS NVLSTLINDV MEISTKDTGR FQLDVRSFRL HSMIKEAACL AKCLCVYRGF GFAIEVEKSL PDHVIGEERR VFQVILHMVG NLLNGTNGGG
501: SVTFRVLSET GSQGRHDQRW ATWKSNSSDG YVYIKFEIGI NNADQSEGSI STGSISTVQL GGGRQTSDQI DEGLSFTMCR RLAQLMQGNI WLVPNPQGFA
601: KSMALVLRFQ LQPSIGINIS EPGESSEHPH SNSLFRGLQV LLADDDDTNR AVTRKLLEKL GCIVSVVSSG FECLGALGPA ASSFQIVLLD LHMPELDGFE
701: VAMRIRKFRS RSWPLIVALT ASADEDVWER CLEIGMNGII RKPVLLDGIA EELRRVLLQA NNVV

Best Arabidopsis Sequence Match ( AT3G23150.1 )
(BLAST)

001: MVKEIASWLL ILSMVVFVSP VLAINGGGYP RCNCEDEGNS FWSTENILET QRVSDFLIAV AYFSIPIELL YFVSCSNVPF KWVLFEFIAF IVLCGMTHLL
101: HGWTYSAHPF RLMMAFTVFK MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ EIRKSLDRHT ILYTTLVELS
201: KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL
301: VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD
401: EQKMIVDTMV KTGNVMSNLV GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR VFQVILHIVG SLVKPRKRQE
501: GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQL IHGNISVVPG
601: SDGSPETMSL LLRFRRRPSI SVHGSSESPA PDHHAHPHSN SLLRGLQVLL VDTNDSNRAV TRKLLEKLGC DVTAVSSGFD CLTAIAPGSS SPSTSFQVVV
701: LDLQMAEMDG YEVAMRIRSR SWPLIVATTV SLDEEMWDKC AQIGINGVVR KPVVLRAMES ELRRVLLQAD QLL

Arabidopsis Description

ETR2Ethylene receptor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPQ2]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.