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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 3
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:endoplasmic reticulum, golgi, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G000200.1
TraesCS2B01G023800.1
TraesCS2D01G000500.1
TraesCS4A01G302000.1
TraesCS4B01G012100.1
TraesCS4D01G010200.1
TraesCS6A01G285800.1
TraesCS6A01G329400.1
TraesCS6A01G399400.2
TraesCS6B01G314600.1
TraesCS6B01G360200.1
TraesCS6B01G439600.1
TraesCS6D01G266200.1
TraesCS6D01G308300.1
TraesCS6D01G383600.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04310.1 TraesCS2A01G000200.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS2B01G023800.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS2D01G000500.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6A01G285800.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6A01G329400.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6A01G399400.2 AT1G04310.1 18577522
AT1G04310.1 TraesCS6B01G314600.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6B01G360200.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6B01G439600.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6D01G266200.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6D01G308300.1 AT1G04310.1 18577522
AT1G04310.1 TraesCS6D01G383600.1 AT1G04310.1 18577522
AT3G23150.1 TraesCS4A01G302000.1 AT5G03730.1 12177468
AT3G23150.1 TraesCS4B01G012100.1 AT5G03730.1 12177468
AT3G23150.1 TraesCS4D01G010200.1 AT5G03730.1 12177468
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G439600.1 Wheat mitochondrion 97.96 97.96
TraesCS6A01G399400.2 Wheat mitochondrion, plasma membrane 97.58 94.56
HORVU6Hr1G091700.6 Barley cytosol, mitochondrion, plasma membrane 97.07 92.58
OQU85974 Sorghum plasma membrane 78.83 79.64
Zm00001d051889_P002 Maize endoplasmic reticulum 74.62 77.59
Os02t0820900-03 Rice mitochondrion 79.72 74.76
GSMUA_Achr11P... Banana plasma membrane 55.1 56.99
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 53.83 55.75
Solyc06g051610.1.1 Tomato cytosol 11.1 52.41
VIT_05s0049g00090.t01 Wine grape plasma membrane 50.89 52.23
VIT_14s0081g00630.t01 Wine grape plasma membrane 50.38 51.97
TraesCS2D01G000500.1 Wheat plasma membrane 51.15 51.68
Solyc06g053710.2.1 Tomato plasma membrane 48.85 50.33
Solyc11g006180.1.1 Tomato plasma membrane 49.23 50.33
PGSC0003DMT400073847 Potato plasma membrane 49.11 50.2
PGSC0003DMT400041983 Potato plasma membrane 48.34 49.8
Solyc05g055070.2.1 Tomato plasma membrane 47.19 49.66
PGSC0003DMT400060160 Potato endoplasmic reticulum 48.09 49.41
CDY35503 Canola plasma membrane 48.85 49.17
Bra023756.1-P Field mustard plasma membrane 48.6 48.85
Solyc12g044870.1.1 Tomato cytosol 10.33 48.8
CDY70443 Canola plasma membrane 48.34 48.59
Solyc06g036450.1.1 Tomato cytosol 6.12 48.0
AT3G23150.1 Thale cress endoplasmic reticulum, plasma membrane 47.19 47.87
Bra040134.1-P Field mustard plasma membrane 46.56 47.65
Solyc09g082910.1.1 Tomato cytosol 10.08 47.59
CDY30004 Canola plasma membrane 46.43 47.52
Solyc04g049990.1.1 Tomato cytosol 7.91 47.33
Solyc04g049320.1.1 Tomato cytosol, plastid, vacuole 6.63 47.27
AT3G04580.1 Thale cress plasma membrane 46.17 47.26
CDY67999 Canola plasma membrane 35.97 45.56
Solyc11g065590.1.1 Tomato cytosol 5.23 45.56
Bra015303.1-P Field mustard endoplasmic reticulum 35.71 45.45
CDY70681 Canola endoplasmic reticulum 35.59 45.22
PGSC0003DMT400044244 Potato plasma membrane 42.98 44.75
CDX86641 Canola endoplasmic reticulum 33.93 44.71
Solyc09g089610.2.1 Tomato endoplasmic reticulum 42.35 44.03
AT1G04310.1 Thale cress endoplasmic reticulum 35.84 43.57
TraesCS6D01G266200.1 Wheat plasma membrane 38.52 41.6
TraesCS6D01G308300.1 Wheat plasma membrane 38.27 41.21
Solyc01g014770.1.1 Tomato cytosol 7.02 41.04
Solyc09g065310.1.1 Tomato cytosol 3.32 40.62
Solyc12g038690.1.1 Tomato cytosol 3.32 40.62
Solyc09g011680.1.1 Tomato cytosol 5.23 39.42
Solyc04g025660.1.1 Tomato cytosol 5.1 38.46
Solyc04g064840.1.1 Tomato endoplasmic reticulum 8.67 37.57
TraesCS5D01G002600.1 Wheat cytosol, plasma membrane, vacuole 30.23 37.44
TraesCS4D01G036400.2 Wheat cytosol, golgi, plasma membrane 29.97 37.01
Solyc12g062760.1.1 Tomato cytosol 4.08 36.36
KRH31729 Soybean endoplasmic reticulum 10.97 35.98
CDY64702 Canola mitochondrion 5.99 35.88
TraesCS1D01G105600.1 Wheat cytosol, golgi, plasma membrane 28.95 35.52
CDY21123 Canola cytosol 13.14 34.33
Solyc08g068360.1.1 Tomato cytosol 5.23 34.17
Solyc12g027610.1.1 Tomato cytosol 8.42 33.85
Bra030564.1-P Field mustard plasma membrane 40.05 18.66
CDY15498 Canola plasma membrane 39.92 18.3
TraesCS4D01G050400.1 Wheat cytosol 16.58 13.05
TraesCS6D01G291900.1 Wheat mitochondrion 16.07 12.99
TraesCS3D01G426600.1 Wheat plasma membrane 15.82 12.46
TraesCS2D01G472500.1 Wheat cytosol 8.04 10.96
TraesCS7D01G485500.1 Wheat nucleus 13.52 10.94
TraesCS7D01G148400.1 Wheat endoplasmic reticulum, plasma membrane 10.71 9.16
TraesCS7D01G148700.1 Wheat peroxisome, plasma membrane, plastid 10.46 8.52
TraesCS7D01G148100.1 Wheat plasma membrane 10.97 7.95
Protein Annotations
Gene3D:1.10.287.130MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300InterPro:CheY-like_superfamily
ncoils:CoilInterPro:ETRInterPro:GAFInterPro:GAF-like_dom_sfGO:GO:0000155GO:GO:0000160
GO:GO:0003674GO:GO:0003824GO:GO:0004673GO:GO:0004871GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0006464GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009987GO:GO:0010105GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0038023GO:GO:0038199GO:GO:0050896GO:GO:0051740InterPro:HATPase_CInterPro:HATPase_C_sf
InterPro:HisK_dim/PInterPro:HisK_dim/P_sfInterPro:IPR001789InterPro:IPR029016InterPro:IPR036890PFAM:PF00072
PFAM:PF00512PFAM:PF01590PFAM:PF02518PIRSF:PIRSF026389PFscan:PS50110PANTHER:PTHR43719
PANTHER:PTHR43719:SF21SMART:SM00065SMART:SM00388SMART:SM00448SUPFAM:SSF47384SUPFAM:SSF52172
SUPFAM:SSF55781SUPFAM:SSF55874InterPro:Sig_transdc_resp-reg_receiverSignalP:SignalP-noTMTMHMM:TMhelixEnsemblPlantsGene:TraesCS6D01G383600
EnsemblPlants:TraesCS6D01G383600.1TIGR:cd00082TIGR:cd00156SEG:seg::
Description
No Description!
Coordinates
chr6D:+:462483712..462487539
Molecular Weight (calculated)
86325.1 Da
IEP (calculated)
7.375
GRAVY (calculated)
0.083
Length
784 amino acids
Sequence
(BLAST)
001: MLDWMAPPRF RCGAGARRRL APPLLLLALA PFAAVAAAGG DVEYPHCSCD GGGGGGFWST DNIFRWQKVS DLLIAAAYFS IPLEILYFVA GLRHLLPFRW
101: VLVQFGAFIV LCGLTHLLAA FTYEPHPFVL VLLLTVAKFL TALVSFLTAI TLLTLIPQLL RVKVRESLLW IKARELDREV DLMKQQEEAS WHVRMLTQEI
201: RKSLDRHTVL DTTLIELSRV LGLTNCAVWM PSAAASDGKV TMHLTHELRR GGSDEGLVVI GVDDADVVEV RRSDGVKLLG PGSALAAASG GGKEDTGTVA
301: AIRMPMLKVS DFKGGTPEVI QTSYAVLVLV PPADKTWGAH ETEIVEVVAD QVAVALSHAS LLEESQAMRD RLAEQNRELL QARRDTLMAN EARDAFQRVM
401: SQGMRRPIHS ILGLVSVVQE DDLTPEQKLV VDTMGRTATV VSTLINDVME MSATNRERFP LETRPFQLHS MIRDAACVSR CLCDFRGFGF AVHVENTLPN
501: LVIGDERRIF HVILHMVGNL ISRIDSGHVT FRVRADDEVA EDTLGQRWDP WRPSYSSGYS SVKFVIGVKS QQSSGSTIPR PGQFKRKPSG EGFDLRLSFS
601: MCRKLVQMMR GNIWAVLDGQ GLPESMTLVL RFQLQPPAPL MSSSTSGGSF ERQYASPSCQ LTGLKILLID DDDINMVVAR KLLEKLGCVV SSLPSGSGFL
701: NSIGPSSGAY QVVLVNLEMT RVSALDVAAR VQQYRSGRWP FVMAMTSEQN SWEKCAQSGI NGILRKPVVM LEAKEELTRI LQSA
Best Arabidopsis Sequence Match ( AT3G23150.1 )
(BLAST)
001: MVKEIASWLL ILSMVVFVSP VLAINGGGYP RCNCEDEGNS FWSTENILET QRVSDFLIAV AYFSIPIELL YFVSCSNVPF KWVLFEFIAF IVLCGMTHLL
101: HGWTYSAHPF RLMMAFTVFK MLTALVSCAT AITLITLIPL LLKVKVREFM LKKKAHELGR EVGLILIKKE TGFHVRMLTQ EIRKSLDRHT ILYTTLVELS
201: KTLGLQNCAV WMPNDGGTEM DLTHELRGRG GYGGCSVSME DLDVVRIRES DEVNVLSVDS SIARASGGGG DVSEIGAVAA IRMPMLRVSD FNGELSYAIL
301: VCVLPGGTPR DWTYQEIEIV KVVADQVTVA LDHAAVLEES QLMREKLAEQ NRALQMAKRD ALRASQARNA FQKTMSEGMR RPMHSILGLL SMIQDEKLSD
401: EQKMIVDTMV KTGNVMSNLV GDSMDVPDGR FGTEMKPFSL HRTIHEAACM ARCLCLCNGI RFLVDAEKSL PDNVVGDERR VFQVILHIVG SLVKPRKRQE
501: GSSLMFKVLK ERGSLDRSDH RWAAWRSPAS SADGDVYIRF EMNVENDDSS SQSFASVSSR DQEVGDVRFS GGYGLGQDLS FGVCKKVVQL IHGNISVVPG
601: SDGSPETMSL LLRFRRRPSI SVHGSSESPA PDHHAHPHSN SLLRGLQVLL VDTNDSNRAV TRKLLEKLGC DVTAVSSGFD CLTAIAPGSS SPSTSFQVVV
701: LDLQMAEMDG YEVAMRIRSR SWPLIVATTV SLDEEMWDKC AQIGINGVVR KPVVLRAMES ELRRVLLQAD QLL
Arabidopsis Description
ETR2Ethylene receptor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPQ2]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.