Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc07g056580.2.1 | |
| Solyc12g011330.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04580.1 | Solyc07g056580.2.1 | AT1G66340.1 | 18577522 |
| AT3G04580.1 | Solyc12g011330.2.1 | AT1G66340.1 | 18577522 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g049990.1.1 | Tomato | cytosol | 60.45 | 61.83 |
| Solyc06g051610.1.1 | Tomato | cytosol | 68.66 | 55.42 |
| Solyc12g044870.1.1 | Tomato | cytosol | 67.91 | 54.82 |
| Solyc09g082910.1.1 | Tomato | cytosol | 63.43 | 51.2 |
| Solyc12g062760.1.1 | Tomato | cytosol | 32.84 | 50.0 |
| Solyc06g036450.1.1 | Tomato | cytosol | 37.31 | 50.0 |
| Solyc04g049320.1.1 | Tomato | cytosol, plastid, vacuole | 39.55 | 48.18 |
| Solyc09g011680.1.1 | Tomato | cytosol | 32.84 | 42.31 |
| Solyc11g065590.1.1 | Tomato | cytosol | 27.61 | 41.11 |
| Solyc04g025660.1.1 | Tomato | cytosol | 31.34 | 40.38 |
| Solyc04g064840.1.1 | Tomato | endoplasmic reticulum | 51.49 | 38.12 |
| Solyc12g027610.1.1 | Tomato | cytosol | 50.75 | 34.87 |
| Solyc09g065310.1.1 | Tomato | cytosol | 16.42 | 34.38 |
| Solyc12g038690.1.1 | Tomato | cytosol | 15.67 | 32.81 |
| Solyc08g068360.1.1 | Tomato | cytosol | 26.87 | 30.0 |
| Solyc05g055070.2.1 | Tomato | plasma membrane | 75.37 | 13.56 |
| Solyc11g006180.1.1 | Tomato | plasma membrane | 65.67 | 11.47 |
| VIT_14s0081g00630.t01 | Wine grape | plasma membrane | 58.96 | 10.39 |
| Bra040134.1-P | Field mustard | plasma membrane | 54.48 | 9.53 |
| CDY30004 | Canola | plasma membrane | 54.48 | 9.53 |
| AT3G04580.1 | Thale cress | plasma membrane | 53.73 | 9.4 |
| KRH34165 | Soybean | plasma membrane | 53.73 | 9.39 |
| HORVU6Hr1G080180.1 | Barley | cytosol | 35.07 | 9.34 |
| KRG92613 | Soybean | plasma membrane | 52.99 | 9.27 |
| KRG97057 | Soybean | plasma membrane | 49.25 | 9.03 |
| KRH68803 | Soybean | plasma membrane | 50.0 | 8.72 |
| Solyc06g053710.2.1 | Tomato | plasma membrane | 48.51 | 8.54 |
| GSMUA_Achr11P... | Banana | plasma membrane | 45.52 | 8.05 |
| GSMUA_Achr8P14350_001 | Banana | endoplasmic reticulum | 44.78 | 7.93 |
| TraesCS2B01G023800.1 | Wheat | plasma membrane | 41.79 | 7.28 |
| TraesCS2D01G000500.1 | Wheat | plasma membrane | 41.79 | 7.22 |
| TraesCS2A01G000200.1 | Wheat | plasma membrane | 41.79 | 7.2 |
| HORVU2Hr1G000030.1 | Barley | plasma membrane | 41.04 | 7.1 |
| OQU85974 | Sorghum | plasma membrane | 41.04 | 7.09 |
| HORVU0Hr1G001750.2 | Barley | endoplasmic reticulum | 41.04 | 7.08 |
| TraesCS6D01G383600.1 | Wheat | mitochondrion | 41.04 | 7.02 |
| TraesCS6B01G439600.1 | Wheat | mitochondrion | 41.04 | 7.02 |
| Os04t0169100-02 | Rice | plasma membrane | 39.55 | 6.95 |
| Zm00001d051889_P002 | Maize | endoplasmic reticulum | 38.81 | 6.9 |
| TraesCS6B01G360200.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 37.31 | 6.87 |
| HORVU6Hr1G091700.6 | Barley | cytosol, mitochondrion, plasma membrane | 41.79 | 6.81 |
| TraesCS6A01G399400.2 | Wheat | mitochondrion, plasma membrane | 41.04 | 6.8 |
| Zm00001d004372_P003 | Maize | plasma membrane | 38.81 | 6.75 |
| EES10426 | Sorghum | plasma membrane | 38.06 | 6.6 |
| TraesCS6D01G308300.1 | Wheat | plasma membrane | 35.82 | 6.59 |
| Os02t0820900-03 | Rice | mitochondrion | 41.04 | 6.58 |
| TraesCS6D01G266200.1 | Wheat | plasma membrane | 35.07 | 6.47 |
| TraesCS6B01G314600.1 | Wheat | plasma membrane | 35.07 | 6.45 |
| TraesCS6A01G329400.1 | Wheat | plasma membrane | 35.07 | 6.44 |
| Solyc09g089610.2.1 | Tomato | endoplasmic reticulum | 35.82 | 6.37 |
| Zm00001d025050_P001 | Maize | cytosol, golgi, plasma membrane | 38.06 | 6.34 |
| TraesCS6A01G285800.1 | Wheat | plasma membrane | 34.33 | 6.32 |
| HORVU6Hr1G071860.2 | Barley | plasma membrane | 33.58 | 6.23 |
| Solyc09g075440.2.1 | Tomato | plasma membrane | 29.1 | 6.14 |
| Solyc07g056580.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 32.84 | 5.98 |
| Solyc12g011330.2.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 32.84 | 5.84 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 28.36 | 5.83 |
| EES06508 | Sorghum | mitochondrion, plasma membrane | 35.82 | 5.8 |
| Os07t0259100-01 | Rice | mitochondrion, plasma membrane | 33.58 | 5.79 |
| Zm00001d053594_P001 | Maize | plasma membrane | 33.58 | 5.6 |
| KXG36402 | Sorghum | plasma membrane | 31.34 | 4.91 |
| CDY64702 | Canola | mitochondrion | 4.48 | 4.58 |
| Zm00001d021687_P001 | Maize | plasma membrane | 26.87 | 4.21 |
| KRG98373 | Soybean | extracellular | 5.22 | 4.0 |
| CDY21123 | Canola | cytosol | 7.46 | 3.33 |
| Solyc02g083670.2.1 | Tomato | cytosol | 1.49 | 2.67 |
| Solyc12g099720.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 11.94 | 2.16 |
| Solyc05g015610.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 16.42 | 2.13 |
| Solyc07g047770.2.1 | Tomato | golgi | 19.4 | 2.11 |
| Solyc04g008110.2.1 | Tomato | plasma membrane | 14.93 | 2.01 |
| Solyc02g083680.1.1 | Tomato | plastid | 11.19 | 1.71 |
| Solyc08g068960.2.1 | Tomato | cytosol | 11.94 | 1.57 |
| HORVU6Hr1G080170.1 | Barley | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc01g014770.1.1 | EnsemblPlantsGene:Solyc01g014770.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | ncoils:Coil |
| PANTHER:PTHR44764 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00027624ED | UniProt:K4AUB2 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1:+:15042803..15043324
Molecular Weight (calculated)
15773.9 Da
IEP (calculated)
8.497
GRAVY (calculated)
0.310
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIVEVVDDQ VVVDLSHATV LEELMMKKLE ARNGLLQQAK ENAVKNIIID TMVRTSIVLL NLINDAMDIP DKDNGRFLVK MMLFQLHSLI REASCLVKCM
101: CVYKGFGFPW LFPFHYLILL WVMRRERRRL FFKI
101: CVYKGFGFPW LFPFHYLILL WVMRRERRRL FFKI
001: MLRSLGLGLL LFALLALVSG DNDYVSCNCD DEGFLSVHTI LECQRVSDLL IAIAYFSIPL ELLYFISFSN VPFKWVLVQF IAFIVLCGMT HLLNAWTYYG
101: PHSFQLMLWL TIFKFLTALV SCATAITLLT LIPLLLKWKV RELYLKQNVL ELNEEVGLMK RQKEMSVQVR MLTREIRKSL DKHMILRTTL VELSKILDLQ
201: NSAVWMPNEN RTEMHLTHEL RANPMRSFRV IPINDPDVVQ VRETKVVTIL RKNSVLAVES SGCGGSEEFG PVAAIRMPML HGLNFKGGTP EFVDTPYAIM
301: VLVLPSANSR VWTDKEIEIA EVVADQVAVA ISHASVLEES QLMREKLGIQ NRALLRAKQN AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL
401: DQKIIVDALM KTSTVLSALI NDVIDISPKD NGKSALEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPNLVVGD EKRTFQLVMY MLGYILDMTD
501: GGKTVTFRVI CEGTGTSQDK SKRETGMWKS HMSDDSLGVK FEVEINEIQN PPLDGSAMAM RHIPNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH
601: GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL LEKLGCEVTA VSSGFECLNA LSNVEMSYRV VILDLQMPEM
701: DGFEVAMKIR KFCGHHWPLI IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQTASE
101: PHSFQLMLWL TIFKFLTALV SCATAITLLT LIPLLLKWKV RELYLKQNVL ELNEEVGLMK RQKEMSVQVR MLTREIRKSL DKHMILRTTL VELSKILDLQ
201: NSAVWMPNEN RTEMHLTHEL RANPMRSFRV IPINDPDVVQ VRETKVVTIL RKNSVLAVES SGCGGSEEFG PVAAIRMPML HGLNFKGGTP EFVDTPYAIM
301: VLVLPSANSR VWTDKEIEIA EVVADQVAVA ISHASVLEES QLMREKLGIQ NRALLRAKQN AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL
401: DQKIIVDALM KTSTVLSALI NDVIDISPKD NGKSALEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPNLVVGD EKRTFQLVMY MLGYILDMTD
501: GGKTVTFRVI CEGTGTSQDK SKRETGMWKS HMSDDSLGVK FEVEINEIQN PPLDGSAMAM RHIPNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH
601: GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL LEKLGCEVTA VSSGFECLNA LSNVEMSYRV VILDLQMPEM
701: DGFEVAMKIR KFCGHHWPLI IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQTASE
Arabidopsis Description
EIN4EIN4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.