Factsheet for Solyc04g008110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075775	Potato	endoplasmic reticulum, golgi, plasma membrane	96.17	96.27
VIT_01s0011g06190.t01	Wine grape	mitochondrion	74.52	70.54
KRH49704	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	68.48	68.9
KRH60456	Soybean	golgi	68.98	67.75
KRH41756	Soybean	golgi	68.98	67.42
KRH70376	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	68.98	67.22
GSMUA_Achr8P22930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	57.3	67.1
GSMUA_Achr10P...	Banana	cytosol	57.91	65.12
Bra024849.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.17	64.13
CDY17631	Canola	cytosol, peroxisome, plasma membrane	67.27	63.5
CDY03101	Canola	cytosol, peroxisome, plasma membrane	67.27	63.5
GSMUA_Achr7P11260_001	Banana	mitochondrion	57.5	62.68
CDY03102	Canola	cytosol	4.53	62.5
AT2G01830.2	Thale cress	cytosol	66.97	61.57
CDY03106	Canola	cytosol	4.33	59.72
EER93561	Sorghum	cytosol	59.11	58.94
Zm00001d033786_P004	Maize	plasma membrane	59.01	58.78
TraesCS4D01G050400.1	Wheat	cytosol	58.61	58.43
TraesCS4A01G264800.1	Wheat	cytosol, peroxisome, plasma membrane	58.61	58.26
TraesCS4B01G050200.1	Wheat	cytosol	58.71	57.84
Os03t0717700-01	Rice	cytosol, mitochondrion, plasma membrane	58.41	57.71
HORVU4Hr1G008210.4	Barley	cytosol	58.21	57.57
TraesCS6D01G291900.1	Wheat	mitochondrion	55.99	57.32
TraesCS6B01G342700.1	Wheat	mitochondrion	55.89	57.22
Zm00001d013412_P004	Maize	cytosol, endoplasmic reticulum, plasma membrane	59.21	57.14
KRH49494	Soybean	mitochondrion	35.75	56.98
TraesCS6A01G312500.2	Wheat	cytosol	55.79	56.13
Zm00001d051812_P003	Maize	mitochondrion	54.88	55.9
Zm00001d017977_P002	Maize	mitochondrion	54.68	55.75
EES07292	Sorghum	mitochondrion	54.18	55.29
Os02t0738400-01	Rice	mitochondrion	56.09	55.04
HORVU6Hr1G077070.5	Barley	mitochondrion	55.59	52.62
Solyc05g015610.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	52.57	50.58
Zm00001d023818_P001	Maize	cytosol	13.39	46.18
Solyc07g047770.2.1	Tomato	golgi	53.07	42.67
Solyc02g083670.2.1	Tomato	cytosol	2.92	38.67
Solyc09g065310.1.1	Tomato	cytosol	1.91	29.69
Solyc12g038690.1.1	Tomato	cytosol	1.91	29.69
Solyc04g049320.1.1	Tomato	cytosol, plastid, vacuole	2.92	26.36
Solyc12g062760.1.1	Tomato	cytosol	2.11	23.86
Solyc09g082910.1.1	Tomato	cytosol	3.93	23.49
Solyc04g025660.1.1	Tomato	cytosol	2.42	23.08
Solyc06g051610.1.1	Tomato	cytosol	3.83	22.89
Solyc12g011330.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	16.92	22.28
Solyc07g056580.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	16.41	22.15
Solyc04g064840.1.1	Tomato	endoplasmic reticulum	3.93	21.55
Solyc09g075440.2.1	Tomato	plasma membrane	13.7	21.42
Solyc12g027610.1.1	Tomato	cytosol	4.03	20.51
Solyc12g044870.1.1	Tomato	cytosol	3.42	20.48
Solyc09g011680.1.1	Tomato	cytosol	2.11	20.19
Solyc11g065590.1.1	Tomato	cytosol	1.81	20.0
Solyc06g053710.2.1	Tomato	plasma membrane	15.21	19.84
Solyc08g068960.2.1	Tomato	cytosol	20.14	19.65
Solyc12g099720.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	14.4	19.32
Solyc08g068360.1.1	Tomato	cytosol	2.32	19.17
Solyc04g049990.1.1	Tomato	cytosol	2.52	19.08
Solyc11g006180.1.1	Tomato	plasma membrane	14.6	18.9
Solyc09g089610.2.1	Tomato	endoplasmic reticulum	13.8	18.17
Solyc05g055070.2.1	Tomato	plasma membrane	13.29	17.72
Solyc02g083680.1.1	Tomato	plastid	15.51	17.52
Solyc06g036450.1.1	Tomato	cytosol	1.71	17.0
Solyc01g014770.1.1	Tomato	cytosol	2.01	14.93

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300	InterPro:CHASE_dom	InterPro:CheY-like_superfamily
ncoils:Coil	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004673
GO:GO:0004721	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006464	GO:GO:0006468	GO:GO:0006470
GO:GO:0006810	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007231	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008272	GO:GO:0009414	GO:GO:0009605	GO:GO:0009607
GO:GO:0009628	GO:GO:0009653	GO:GO:0009719	GO:GO:0009736	GO:GO:0009790	GO:GO:0009791
GO:GO:0009884	GO:GO:0009885	GO:GO:0009987	GO:GO:0009991	GO:GO:0010029	GO:GO:0010086
GO:GO:0016020	GO:GO:0016021	GO:GO:0016036	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016772	GO:GO:0016787	GO:GO:0018106	GO:GO:0019538	GO:GO:0019899	GO:GO:0019901
GO:GO:0019955	GO:GO:0023014	GO:GO:0033500	GO:GO:0038023	GO:GO:0042742	GO:GO:0043424
GO:GO:0048509	GO:GO:0048831	GO:GO:0071329	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P
InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR006189	InterPro:IPR036890
UniProt:K4BNW7	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PFAM:PF03924	PRINTS:PR00344
PFscan:PS50109	PFscan:PS50110	PFscan:PS50839	PANTHER:PTHR43719	PANTHER:PTHR43719:SF16	SMART:SM00387
SMART:SM00388	SMART:SM00448	SMART:SM01079	SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874
InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	EnsemblPlantsGene:Solyc04g008110.2	EnsemblPlants:Solyc04g008110.2.1	TMHMM:TMhelix	UniParc:UPI0002766D89
SEG:seg	:	:	:	:	:

Description

Histidine kinase 4 [Source:Projected from Arabidopsis thaliana (AT2G01830) UniProtKB/Swiss-Prot;Acc:Q9C5U0]

Coordinates

chr4:-:1762165..1770080

Molecular Weight (calculated)

110837.0 Da

IEP (calculated)

6.892

GRAVY (calculated)

-0.218

Length

993 amino acids

Sequence
(BLAST)

001: MGEKMQSHHM LSVKGSEQFN SKRKHRFVPS QGYLPKLFAL WIIWCTFFSI ALYFYMDANH KEKRKEGLVS MCDQRARMLQ DQFSVSVNHV HALAILVSTF
101: HYEKNPSAID QSTFAEYTAR TAFERPLLSG VAYAERVLNS EREEFEREHG WTIKTMEKEP SPIRDEYSPV IFSQETVSYI ESLDMMSGEE DRENILRARA
201: SGKAVLTSPF RLLGSHHLGV VLTFPVYRSK LPENPTEHER VEATAGYLGG AFDVESLVEC LLGQLAANHP IIVNVYDVTN SSDPLIMYGH QNPNGDASLK
301: HVSKLDFGDP FRKHEMICRY LYEAPISWGA VTTAVFIFTI FLLIGYTGYK SASHINKVED DFHKMQELKV QAEAADVAKS QFLATVSHEI RTPMNGILGM
401: LALLLDTDLS STQRDYAQTA QDCGKSLIRL INEVLDRAKI EAGKLELEAV PFDLRSILDD VLSLFSDDSR RKSLELAVFV SDKVPEIVMG DPGRFRQVIT
501: NLVNNSVKFT LQGHIFVQVH LVELNKDGDK KDTCLNGGTE SVISSSAFHF KTLSGYETAD SQNTWNTFKH IIADNGLDYE SATKVVNDDL SRDVTVMVSV
601: EDTGIGIPLK TQERVFTPFM QADSSTSRKY GGTGIGLSIS KCLVELMGGH ISFISRPKIG STFSFSVSFL RCEKHALGDL KKSHSDDLPT SFKGLNAIIV
701: DKKPVRAAVT GYHLKRLGIR AEVVSSIKRA AATLGRNVSV VSNERKLDII LVEKDLWISE DVDLNLHFPN INQNGHVYKL PKMILLATNI TNAEHEKAKA
801: VGFSVIMKPL RASMLAACLQ QLIGTGNKSR GKDMSNRSPS LRGLLCGMKI LVVDDNRVNR RVAAGALKKF GAEVECAESG KAALALLQLP HNFDACFMDI
901: QMPEMDGFEA TRRIRELESI ANEQQNGVSN CDGGTKRRRW HMPILAMTAD VIHATLEKCL KCGMDGYVSK PFEEENLYEA VSKFFESKPN SDE

Best Arabidopsis Sequence Match ( AT2G01830.2 )
(BLAST)

0001: MRRDFVYNNN AMFNPLTTHY SSDMNWALNN HQEEEEEPRR IEISDSESLE NLKSSDFYQL GGGGALNSSE KPRKIDFWRS GLMGFAKMQQ QQQLQHSVAV
0101: KMNNNNNNDL MGNKKGSTFI QEHRALLPKA LILWIIIVGF ISSGIYQWMD DANKIRREEV LVSMCDQRAR MLQDQFSVSV NHVHALAILV STFHYHKNPS
0201: AIDQETFAEY TARTAFERPL LSGVAYAEKV VNFEREMFER QHNWVIKTMD RGEPSPVRDE YAPVIFSQDS VSYLESLDMM SGEEDRENIL RARETGKAVL
0301: TSPFRLLETH HLGVVLTFPV YKSSLPENPT VEERIAATAG YLGGAFDVES LVENLLGQLA GNQAIVVHVY DITNASDPLV MYGNQDEEAD RSLSHESKLD
0401: FGDPFRKHKM ICRYHQKAPI PLNVLTTVPL FFAIGFLVGY ILYGAAMHIV KVEDDFHEMQ ELKVRAEAAD VAKSQFLATV SHEIRTPMNG ILGMLAMLLD
0501: TELSSTQRDY AQTAQVCGKA LIALINEVLD RAKIEAGKLE LESVPFDIRS ILDDVLSLFS EESRNKSIEL AVFVSDKVPE IVKGDSGRFR QIIINLVGNS
0601: VKFTEKGHIF VKVHLAEQSK DESEPKNALN GGVSEEMIVV SKQSSYNTLS GYEAADGRNS WDSFKHLVSE EQSLSEFDIS SNVRLMVSIE DTGIGIPLVA
0701: QGRVFMPFMQ ADSSTSRNYG GTGIGLSISK CLVELMRGQI NFISRPHIGS TFWFTAVLEK CDKCSAINHM KKPNVEHLPS TFKGMKAIVV DAKPVRAAVT
0801: RYHMKRLGIN VDVVTSLKTA VVAAAAFERN GSPLPTKPQL DMILVEKDSW ISTEDNDSEI RLLNSRTNGN VHHKSPKLAL FATNITNSEF DRAKSAGFAD
0901: TVIMKPLRAS MIGACLQQVL ELRKTRQQHP EGSSPATLKS LLTGKKILVV DDNIVNRRVA AGALKKFGAE VVCAESGQVA LGLLQIPHTF DACFMDIQMP
1001: QMDGFEATRQ IRMMEKETKE KTNLEWHLPI LAMTADVIHA TYEECLKSGM DGYVSKPFEE ENLYKSVAKS FKPNPISPSS

Arabidopsis Description

AHK4Histidine kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.