Factsheet for Solyc05g015610.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g080540.2.1
Solyc03g005430.2.1
Solyc06g053750.2.1
Solyc06g084410.2.1
Solyc07g047770.2.1
Solyc09g089560.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27320.1	Solyc01g080540.2.1	AT3G21510.1	16965536
AT1G27320.1	Solyc06g084410.2.1	AT3G29350.1	16965536
AT1G27320.1	Solyc07g047770.2.1	AT5G35750.1	16965536
AT1G27320.1	Solyc03g005430.2.1	AT5G43560.1	18642946
AT1G27320.1	Solyc06g053750.2.1	AT5G43560.1	18642946
AT1G27320.1	Solyc09g089560.2.1	AT5G43560.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400084727	Potato	cytosol, golgi, plasma membrane	51.16	98.14
VIT_01s0010g03780.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	73.64	73.15
KRH42680	Soybean	plasma membrane	71.41	71.55
KRH58780	Soybean	endoplasmic reticulum, golgi, plasma membrane	70.83	70.97
Bra030037.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	66.09	67.06
CDY15717	Canola	endoplasmic reticulum, golgi, plasma membrane	66.09	66.8
CDY03909	Canola	endoplasmic reticulum, golgi, plasma membrane	64.63	66.63
AT1G27320.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	66.57	66.31
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	60.37	63.9
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	61.05	63.13
GSMUA_Achr4P15980_001	Banana	cytosol	60.47	62.53
VIT_04s0008g03460.t01	Wine grape	plastid	20.16	61.9
TraesCS3A01G433200.1	Wheat	peroxisome	58.53	60.22
TraesCS3D01G426600.1	Wheat	plasma membrane	57.95	60.1
TraesCS3B01G469000.1	Wheat	cytosol, golgi, mitochondrion, peroxisome	58.62	59.96
Zm00001d042312_P003	Maize	golgi, mitochondrion, plasma membrane	58.24	59.68
Os01t0923700-04	Rice	endoplasmic reticulum, golgi, peroxisome	58.91	59.43
KXG34012	Sorghum	cytosol, peroxisome, plasma membrane	57.66	59.2
Zm00001d012005_P002	Maize	plasma membrane	58.53	57.85
HORVU3Hr1G094870.10	Barley	plasma membrane	58.33	57.5
Solyc04g008110.2.1	Tomato	plasma membrane	50.58	52.57
Solyc07g047770.2.1	Tomato	golgi	54.65	45.67
Solyc02g083670.2.1	Tomato	cytosol	2.52	34.67
Solyc12g038690.1.1	Tomato	cytosol	1.65	26.56
Solyc09g065310.1.1	Tomato	cytosol	1.65	26.56
Solyc12g062760.1.1	Tomato	cytosol	1.94	22.73
Solyc07g056580.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	15.79	22.15
Solyc04g025660.1.1	Tomato	cytosol	2.23	22.12
Solyc12g011330.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	15.89	21.75
Solyc09g011680.1.1	Tomato	cytosol	2.13	21.15
Solyc09g082910.1.1	Tomato	cytosol	3.39	21.08
Solyc09g075440.2.1	Tomato	plasma membrane	12.89	20.94
Solyc04g049320.1.1	Tomato	cytosol, plastid, vacuole	2.23	20.91
Solyc06g051610.1.1	Tomato	cytosol	3.29	20.48
Solyc08g068960.2.1	Tomato	cytosol	19.67	19.94
Solyc06g053710.2.1	Tomato	plasma membrane	14.24	19.32
Solyc12g044870.1.1	Tomato	cytosol	3.1	19.28
Solyc12g099720.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	13.66	19.05
Solyc11g065590.1.1	Tomato	cytosol	1.65	18.89
Solyc11g006180.1.1	Tomato	plasma membrane	13.95	18.77
Solyc12g027610.1.1	Tomato	cytosol	3.49	18.46
Solyc04g064840.1.1	Tomato	endoplasmic reticulum	3.2	18.23
Solyc06g036450.1.1	Tomato	cytosol	1.74	18.0
Solyc05g055070.2.1	Tomato	plasma membrane	12.89	17.85
Solyc09g089610.2.1	Tomato	endoplasmic reticulum	12.89	17.64
Solyc02g083680.1.1	Tomato	plastid	14.92	17.52
Solyc08g068360.1.1	Tomato	cytosol	2.03	17.5
Solyc01g014770.1.1	Tomato	cytosol	2.13	16.42
Solyc04g049990.1.1	Tomato	cytosol	2.03	16.03

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300	InterPro:CHASE_dom	InterPro:CheY-like_superfamily
GO:GO:0000003	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004673
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0006139	GO:GO:0006464	GO:GO:0006810	GO:GO:0006950	GO:GO:0006970
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009116	GO:GO:0009409	GO:GO:0009414	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628
GO:GO:0009651	GO:GO:0009719	GO:GO:0009791	GO:GO:0009908	GO:GO:0009909	GO:GO:0009987
GO:GO:0009991	GO:GO:0010029	GO:GO:0010087	GO:GO:0010150	GO:GO:0010271	GO:GO:0016020
GO:GO:0016021	GO:GO:0016036	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772
GO:GO:0018106	GO:GO:0019538	GO:GO:0023014	GO:GO:0034757	GO:GO:0038023	GO:GO:0040007
GO:GO:0042742	GO:GO:0043424	GO:GO:0048509	GO:GO:0048831	GO:GO:0070417	GO:GO:0071215
GO:GO:0071329	GO:GO:0080117	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf
InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR006189	InterPro:IPR036890	UniProt:K4BYS7
PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PFAM:PF03924	PRINTS:PR00344	InterPro:PRibTrfase_dom
PFscan:PS50109	PFscan:PS50110	PFscan:PS50839	PANTHER:PTHR43719	PANTHER:PTHR43719:SF14	SMART:SM00387
SMART:SM00388	SMART:SM00448	SMART:SM01079	SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874
InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	EnsemblPlantsGene:Solyc05g015610.2	EnsemblPlants:Solyc05g015610.2.1	TMHMM:TMhelix	UniParc:UPI0002766A98
SEG:seg	:	:	:	:	:

Description

Histidine kinase 3 [Source:Projected from Arabidopsis thaliana (AT1G27320) UniProtKB/Swiss-Prot;Acc:Q9C5U1]

Coordinates

chr5:+:11522127..11527984

Molecular Weight (calculated)

114965.0 Da

IEP (calculated)

8.544

GRAVY (calculated)

-0.139

Length

1032 amino acids

Sequence
(BLAST)

0001: MSLFYVIGFG LKLGSLILTL CCWFLSLIFS MNGEVMTSSK TLLGDGEHIV KKLWDLSAKI YHCYPQYVGN RKVGNKWWRK LLIVWLLFWI VVSFSVLWYM
0101: NSKAVEKRKE TLTSMCDERA RMLQDQFNVS MNHVQAMSIL ISTFHHARNP SAIDQCTFAS YTERTAFERP LTSGVAYAVR VLHSERKEFE KRHGWSIKRM
0201: DTREPTPVHK DNEYDRDGLE PSPIQAEYAP VIFAQDTIAH VISVDMLSGK EDRENVLRAR ESGKGVLTAP FRLLKTNRLG VIKTFAVYKT DLPSNATPNE
0301: RIQATDGYLG GVLDIESLVE KLLQQLASKQ TILVNVYDTT NISHPISMYG SNVSGDGLEH VSALNFGDPF RRHEMRCRFK QKPPWPWLAI TTATGILIIA
0401: LLIGQIFHAT INRIAKVEDD YHQMMMLKKR AEAADVAKSQ FLATVSHEIR TPMNGVLGML HMLTDTNLDV TQQDYVSTAQ ASGKALVSLI NEVLDQAKIE
0501: SGKLELDAVC FDVRDTLDEV LSLFSGKSQE KGVELAGYIS DKVPDVLIGD PGRFRQIITN LVGNSIKFTE KGHIFVTVHL VEEVTESAEE FKVNSLFKST
0601: LSGSPVADKR QSWRSFMGFN QEGSSFTSSS SDQINLMVSV EDTGVGIPLD AQSRIFTPFM QVGPSIARTH GGTGIGLSIS KCLVQLMKGE IGFVSLPKIG
0701: STFTFTAVFT NSRNNWNEKK SQQINNQSNS ISSDFHGLRA LIVDPRTVRA RVSQYHMKRL GVHTEVVSDL NRGLSHVRTE NGVTNMILIE QEVWDADLGK
0801: SSLFVKNLRK INASSSPKLF ILANSINSSR AGVSVNGFPT PFIIMKPLRA SMLAASLQRA MGVGNKGNCT NGELSGISLS KLLQGRKILI VDDNNVNLRV
0901: AAAALKKYGA DVICTDSGKK ALTFLQPPHQ FDACFMDIQM PEMDGFQATK IIREMESDIN SRIKLGQLPP EAYGNVSSWK VPILAMTADV IQATNELCQK
1001: CGMDGYVSKP FEAEQLYEEV SRFFQIKPTQ NT

Best Arabidopsis Sequence Match ( AT1G27320.1 )
(BLAST)

0001: MSLFHVLGFG VKIGHLFWML CCWFVSWFVD NGIEDKSGLL VGSVGDLEKT KMTTLKKKNK MWFWNKISSS GLKIPSFSYQ FLGSVKFNKA WWRKLVVVWV
0101: VFWVLVSIWT FWYFSSQAME KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS FERPLTSGVA YAMRVLHSER
0201: EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV
0301: YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV
0401: LSMVTSFGIL VIALLVAHII HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE LDVTQQDYVR TAQASGKALV
0501: SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES
0601: IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK
0701: GEIGFSSTPK VGSTFTFTAV FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA LHYLKIGTTT VNMILIEQEI
0801: WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV
0901: NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE
1001: ECLKCGMDGY VSKPFEAEQL YREVSRFFNS PSDTES

Arabidopsis Description

AHK3HK3 [Source:UniProtKB/TrEMBL;Acc:A0A178WL02]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.