Factsheet for Zm00001d042312_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi

Predictor Summary:

golgi 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane
Any Predictor:	golgi, mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d014297_P006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27320.1	Zm00001d014297_P006	AT5G35750.1	16965536

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34012	Sorghum	cytosol, peroxisome, plasma membrane	93.84	94.03
Zm00001d012005_P002	Maize	plasma membrane	95.03	91.67
Os01t0923700-04	Rice	endoplasmic reticulum, golgi, peroxisome	81.63	80.35
TraesCS3D01G426600.1	Wheat	plasma membrane	77.36	78.29
TraesCS3A01G433200.1	Wheat	peroxisome	77.46	77.77
TraesCS3B01G469000.1	Wheat	cytosol, golgi, mitochondrion, peroxisome	76.86	76.71
HORVU3Hr1G094870.10	Barley	plasma membrane	77.06	74.12
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	66.83	69.03
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	66.83	67.43
GSMUA_Achr4P15980_001	Banana	cytosol	65.04	65.63
PGSC0003DMT400084727	Potato	cytosol, golgi, plasma membrane	33.86	63.38
VIT_01s0010g03780.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	62.66	60.73
KRH58780	Soybean	endoplasmic reticulum, golgi, plasma membrane	60.38	59.03
KRH42680	Soybean	plasma membrane	60.18	58.84
CDY03909	Canola	endoplasmic reticulum, golgi, plasma membrane	57.99	58.34
Solyc05g015610.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	59.68	58.24
Bra030037.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	58.69	58.11
CDY15717	Canola	endoplasmic reticulum, golgi, plasma membrane	58.59	57.79
AT1G27320.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	58.69	57.05
VIT_04s0008g03460.t01	Wine grape	plastid	17.97	53.87
Zm00001d014297_P006	Maize	cytosol	49.75	53.24
Zm00001d033786_P004	Maize	plasma membrane	47.86	48.34
Zm00001d017977_P002	Maize	mitochondrion	46.18	47.74
Zm00001d051812_P003	Maize	mitochondrion	45.98	47.49
Zm00001d013412_P004	Maize	cytosol, endoplasmic reticulum, plasma membrane	47.57	46.55
Zm00001d023818_P001	Maize	cytosol	11.42	39.93
Zm00001d028026_P001	Maize	endoplasmic reticulum, extracellular	7.45	30.36
Zm00001d033642_P001	Maize	plasma membrane	13.8	21.92
Zm00001d013486_P001	Maize	plasma membrane	13.6	21.61
Zm00001d043247_P001	Maize	nucleus	6.85	20.72
Zm00001d037604_P001	Maize	plastid	12.71	20.35
Zm00001d036704_P002	Maize	nucleus	19.46	20.31
Zm00001d046928_P002	Maize	nucleus	19.66	20.29
Zm00001d012994_P001	Maize	extracellular, golgi, vacuole	14.7	20.14
Zm00001d035846_P001	Maize	extracellular	18.87	18.34
Zm00001d013338_P002	Maize	cytosol	6.75	18.18
Zm00001d051889_P002	Maize	endoplasmic reticulum	12.51	16.71
Zm00001d004372_P003	Maize	plasma membrane	12.71	16.62
Zm00001d025050_P001	Maize	cytosol, golgi, plasma membrane	13.11	16.42
Zm00001d021687_P001	Maize	plasma membrane	11.82	13.92
Zm00001d053594_P001	Maize	plasma membrane	10.82	13.57

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300	EntrezGene:541641	UniProt:A0A1D6N2S4
InterPro:CHASE_dom	InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674
GO:GO:0003824	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538
GO:GO:0023014	GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf
InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR006189	InterPro:IPR036890	ProteinID:ONM35002.1
ProteinID:ONM35004.1	ProteinID:ONM35005.1	ProteinID:ONM35008.1	ProteinID:ONM35010.1	ProteinID:ONM35011.1	ProteinID:ONM35014.1
PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PFAM:PF03924	PRINTS:PR00344	PFscan:PS50109
PFscan:PS50110	PFscan:PS50839	PANTHER:PTHR43719	PANTHER:PTHR43719:SF14	SMART:SM00387	SMART:SM00388
SMART:SM00448	SMART:SM01079	SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C
InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI0002208F6B	EnsemblPlantsGene:Zm00001d042312	EnsemblPlants:Zm00001d042312_P003	EnsemblPlants:Zm00001d042312_T003
SEG:seg	:	:	:	:	:

Description

histidine kinase2 histidine kinase2

Coordinates

chr3:+:160473965..160480113

Molecular Weight (calculated)

112422.0 Da

IEP (calculated)

8.579

GRAVY (calculated)

-0.222

Length

1007 amino acids

Sequence
(BLAST)

0001: MTVTARGRSG GAGMGEKGGA PGLGFLSLDR MRVLLPPLRL PEKLSARTLR THLFTNYRMR KVRDSSSWLI PLWVSSWVLV ASLIYLCMSY QAVGKRRESL
0101: ASMCDERARM LQDQFNVSMN HLQALAILVS TFHHSKTPSA IDQKTFARYA ERTAFERPLT SGVAYGVRVT HAEREQFERQ QGWSIKKMYS SKTKNQSQGP
0201: GNAEDAEVRE PAEEYAPVIF AQDAYKHVIS FDLLSGADDR DNVLRARESG KGVLTAPFKL LNNRLGVIFT YAVYKYELPA NARPQERIQA AIGYLGGIFD
0301: IEALVDKLLH QLAGKQSIMV NVYDTTNERP ISMYGSNDTG SGMCQVSTLN FGDPSRKHVM HCRFIQSPPW PWMAITTSIG TLVIALLIGY IVHATAKRIA
0401: RVEDDFQEMS LLKKRAEDAD IAKSQFLATV SHEIRTPMNG VLGMLQMLMD TDLDTTQQDY VRTAQASGKT LVSLINEVLD QAKIESGKLE LEVVPFDLRT
0501: VCDDILSLFC GKAQEKGLEL AVFVSDQVPQ TLIGDPGRIR QIITNLVGNS IKFTEKGHIY LTVHVVEEIM HCLEVETGTQ YTNTLSGYPV ANRKRSWENF
0601: RLFSRELNSS EMPFAPIASD SISLMISVED TGAGIPFDAQ SRVFTPFMQV GPSIARIHGG TGIGLSISKC LVGLMKGEIG FSSKPQVGST FTFTAVLTRV
0701: HSSRNENKSS EFKEINALVV DHRPVRAKVT KYHLQRLGVQ TELTTDLDQY ISKNNCGSQI AKLVLIDKET WLKESHSMPL LVTKLRNKDQ PDSTKLFLLE
0801: NPKSSVKSNS HIFREYNLNV IMKPLRASML QVSLQRALGG IDKLHCRNGV VGNSTLGSLL HKKRIIVVDD NIVNLKVAAG ALKKYGAEVT CADSGKEAIT
0901: LLKPPHNFDA CFMDIQMPEM DGFEATKRIR VMERDLNEQI ERGEAPPECV GVRQWRTPIL AMTADVIQAT HEQCLKSEMD GYVSKPFEGE QLYREVARFF
1001: LNQDQVQ

Best Arabidopsis Sequence Match ( AT1G27320.1 )
(BLAST)

0001: MSLFHVLGFG VKIGHLFWML CCWFVSWFVD NGIEDKSGLL VGSVGDLEKT KMTTLKKKNK MWFWNKISSS GLKIPSFSYQ FLGSVKFNKA WWRKLVVVWV
0101: VFWVLVSIWT FWYFSSQAME KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS FERPLTSGVA YAMRVLHSER
0201: EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV
0301: YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV
0401: LSMVTSFGIL VIALLVAHII HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE LDVTQQDYVR TAQASGKALV
0501: SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES
0601: IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK
0701: GEIGFSSTPK VGSTFTFTAV FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA LHYLKIGTTT VNMILIEQEI
0801: WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV
0901: NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE
1001: ECLKCGMDGY VSKPFEAEQL YREVSRFFNS PSDTES

Arabidopsis Description

AHK3HK3 [Source:UniProtKB/TrEMBL;Acc:A0A178WL02]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.