Factsheet for Zm00001d037604_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005348_P001
Zm00001d016675_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	Zm00001d005348_P001	AT5G03730.1	9560288
AT2G40940.1	Zm00001d016675_P001	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19059	Sorghum	plasma membrane	95.23	94.78
Os05t0155200-01	Rice	plasma membrane	70.43	85.52
TraesCS1D01G105600.1	Wheat	cytosol, golgi, plasma membrane	83.94	82.63
TraesCS1A01G096600.1	Wheat	cytosol, golgi, plasma membrane	83.78	82.6
TraesCS1B01G127000.1	Wheat	cytosol, golgi, plasma membrane	83.62	82.45
HORVU1Hr1G022550.1	Barley	cytosol, golgi, plasma membrane	82.99	81.82
Zm00001d033642_P001	Maize	plasma membrane	72.34	71.77
Zm00001d013486_P001	Maize	plasma membrane	72.02	71.45
GSMUA_Achr5P00120_001	Banana	cytosol	39.27	68.99
VIT_07s0005g00850.t01	Wine grape	cytosol	68.52	67.77
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	66.14	65.51
Solyc09g075440.2.1	Tomato	plasma membrane	66.14	65.51
CDX80113	Canola	plasma membrane	63.59	65.25
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	63.59	65.25
KRH68220	Soybean	cytosol	65.82	65.09
KRG96477	Soybean	cytosol	65.66	64.94
Bra004449.1-P	Field mustard	plasma membrane	62.8	64.65
CDY63851	Canola	plasma membrane	63.91	64.53
Zm00001d028026_P001	Maize	endoplasmic reticulum, extracellular	24.32	61.94
Zm00001d043247_P001	Maize	nucleus	18.92	35.74
Zm00001d013338_P002	Maize	cytosol	18.28	30.75
Zm00001d051889_P002	Maize	endoplasmic reticulum	35.93	29.97
Zm00001d004372_P003	Maize	plasma membrane	34.66	28.31
Zm00001d025050_P001	Maize	cytosol, golgi, plasma membrane	35.61	27.86
Zm00001d053594_P001	Maize	plasma membrane	28.93	22.66
Zm00001d021687_P001	Maize	plasma membrane	27.82	20.47
Zm00001d014297_P006	Maize	cytosol	19.87	13.28
Zm00001d033786_P004	Maize	plasma membrane	20.99	13.24
Zm00001d017977_P002	Maize	mitochondrion	20.19	13.04
Zm00001d051812_P003	Maize	mitochondrion	19.87	12.82
Zm00001d042312_P003	Maize	golgi, mitochondrion, plasma membrane	20.35	12.71
Zm00001d013412_P004	Maize	cytosol, endoplasmic reticulum, plasma membrane	20.51	12.54
Zm00001d012005_P002	Maize	plasma membrane	20.19	12.16
Zm00001d023818_P001	Maize	cytosol	5.09	11.11
Zm00001d012994_P001	Maize	extracellular, golgi, vacuole	12.72	10.88
Zm00001d036704_P002	Maize	nucleus	16.38	10.67
Zm00001d046928_P002	Maize	nucleus	16.38	10.55
Zm00001d035846_P001	Maize	extracellular	16.38	9.94

Protein Annotations

Gene3D:1.10.287.130	EntrezGene:103630068	MapMan:11.5.2.1	Gene3D:3.30.450.40	Gene3D:3.30.565.10	UniProt:A0A1D6LZB5
ProteinID:AQK84430.1	InterPro:GAF	InterPro:GAF-like_dom_sf	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674
GO:GO:0003824	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016772	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR005467	InterPro:IPR029016	InterPro:IPR036890
PFAM:PF00512	PFAM:PF01590	PFAM:PF02518	PRINTS:PR00344	PFscan:PS50109	PANTHER:PTHR24423
PANTHER:PTHR24423:SF545	SMART:SM00065	SMART:SM00387	SMART:SM00388	SUPFAM:SSF47384	SUPFAM:SSF55781
SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	TMHMM:TMhelix	UniParc:UPI0004DEA323	EnsemblPlantsGene:Zm00001d037604	EnsemblPlants:Zm00001d037604_P001
EnsemblPlants:Zm00001d037604_T001	SEG:seg	:	:	:	:

Description

Ethylene response sensor 1

Coordinates

chr6:-:131348955..131353566

Molecular Weight (calculated)

69754.6 Da

IEP (calculated)

7.315

GRAVY (calculated)

0.183

Length

629 amino acids

Sequence
(BLAST)

001: MDGCDCIEPL WQADDLLMKY QYISDFFIAL AYFSIPLELI YFVQKSAFFP YRWVLIQFGA FIVLCGATHL INMWTFTTHT KTIAVVLTVA KVATAVVSCI
101: TALMLVHIIP DLLSVKLRER FLKAKAEELD REMGIIRTQE ETGRHVHMLT HEIRSTLDRH TILRTTLVEM RRTLGLAECA VWMPSRSGTT LQLSHALHTN
201: APLGSVVPIN LPIVATIFNS NRAERIPHTS PLASVKAQKS KYVPPEVVAV RVPLLQLTNF QINGWPELSA KAFAVLVLML PPDSARKWRP HELELVEVVA
301: DQVAVALSHA AILEESMQAR DLLLEQNIAL DAARREAEMA ICARNDFLAV MNHEMRTPMR AIISLSSLLL ETKLTAEQRV MIETILKSSD LLETLSNDVL
401: DISKLGDGSL ELEIAPFNLH ATFTDVVDLI KPVAALKRLS VMVHLAPELP TCAIGDRKRL MQIILNVAGN SVKFTKEGHI SVSASIARPD SLRDPYALDL
501: HPVLSDGSFY LAVQVKDTGC GISPQDMPHT FTRFAHQQNA TNKLRSGNGL GLALSRRFVA LMQGNIWLES EGVGKGCTAT FFVKLGLSDA NLRRMVPPVQ
601: PKHGNADPDV SSIINGDMAI LPRCYQSMI

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.