Factsheet for Zm00001d016675_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004372_P003
Zm00001d012994_P001
Zm00001d013338_P002
Zm00001d013486_P001
Zm00001d021687_P001
Zm00001d025050_P001
Zm00001d028026_P001
Zm00001d033642_P001
Zm00001d035846_P001
Zm00001d037604_P001
Zm00001d043247_P001
Zm00001d051889_P002
Zm00001d053594_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03730.1	Zm00001d013338_P002	AT2G40940.1	9560288
AT5G03730.1	Zm00001d013486_P001	AT2G40940.1	9560288
AT5G03730.1	Zm00001d028026_P001	AT2G40940.1	9560288
AT5G03730.1	Zm00001d033642_P001	AT2G40940.1	9560288
AT5G03730.1	Zm00001d037604_P001	AT2G40940.1	9560288
AT5G03730.1	Zm00001d043247_P001	AT2G40940.1	9560288
AT5G03730.1	Zm00001d012994_P001	AT2G47430.1	9560288
AT5G03730.1	Zm00001d035846_P001	AT2G47430.1	9560288
AT5G03730.1	Zm00001d004372_P003	AT3G23150.1	12177468
AT5G03730.1	Zm00001d021687_P001	AT3G23150.1	12177468
AT5G03730.1	Zm00001d025050_P001	AT3G23150.1	12177468
AT5G03730.1	Zm00001d051889_P002	AT3G23150.1	12177468
AT5G03730.1	Zm00001d053594_P001	AT3G23150.1	12177468

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30326	Sorghum	cytosol, plastid	92.88	92.41
Os02t0527600-01	Rice	cytosol	76.38	78.23
CDY10360	Canola	cytosol	52.0	56.75
CDX70289	Canola	cytosol	52.25	55.96
KRH71740	Soybean	cytosol	45.75	55.45
Zm00001d005348_P001	Maize	cytosol	53.12	55.27
CDX80884	Canola	cytosol	54.38	54.79
Bra005778.1-P	Field mustard	cytosol	54.25	54.59
CDY11267	Canola	cytosol	54.12	54.4
VIT_13s0074g00430.t01	Wine grape	cytosol	51.38	54.22
AT5G03730.1	Thale cress	cytosol	55.38	53.96
KRH32650	Soybean	cytosol	55.5	53.11
Bra009514.1-P	Field mustard	plastid	50.5	53.02
KRH20027	Soybean	cytosol	55.38	52.99
KRG96132	Soybean	cytosol	53.5	52.97
Solyc09g009090.2.1	Tomato	cytosol	55.38	52.93
PGSC0003DMT400021612	Potato	cytosol	52.38	52.9
KRH67846	Soybean	cytosol	53.25	52.59
Solyc10g085570.1.1	Tomato	cytosol	52.0	52.46
VIT_08s0007g03910.t01	Wine grape	cytosol	55.12	51.52
KRH33179	Soybean	cytosol	24.38	51.18
Solyc10g083610.1.1	Tomato	cytosol	52.5	50.66
Zm00001d002357_P007	Maize	cytosol	38.38	40.29
Zm00001d053575_P005	Maize	mitochondrion	33.75	31.84
Zm00001d011572_P001	Maize	cytosol, plastid	15.38	31.38
Zm00001d048430_P002	Maize	cytosol, plastid	34.12	27.44
Zm00001d027743_P002	Maize	cytosol, plastid	33.75	26.95
Zm00001d030626_P003	Maize	cytosol	25.5	25.22
Zm00001d041599_P004	Maize	cytosol, nucleus, plastid	25.38	24.76
Zm00001d044814_P002	Maize	cytosol, plastid	33.62	24.52
Zm00001d051341_P001	Maize	plastid	5.0	22.35
Zm00001d053515_P002	Maize	cytosol	23.38	22.05
Zm00001d042835_P001	Maize	plastid	5.12	21.93
Zm00001d043900_P022	Maize	cytosol	23.0	21.78
Zm00001d011573_P001	Maize	cytosol, nucleus, plasma membrane	7.12	17.7
Zm00001d018025_P001	Maize	cytosol	20.38	16.57
Zm00001d030937_P006	Maize	cytosol	18.75	13.46
Zm00001d046569_P002	Maize	cytosol	18.0	12.75
Zm00001d000346_P003	Maize	cytosol	16.88	12.13
Zm00001d018318_P006	Maize	cytosol	17.25	11.75
Zm00001d035817_P001	Maize	extracellular	18.88	11.72
Zm00001d035818_P002	Maize	cytosol	18.0	11.46
Zm00001d045124_P012	Maize	cytosol	17.25	10.92

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100191496	MapMan:11.5.2.2	MapMan:18.4.1.30	Gene3D:3.30.200.20	ProteinID:AQK71415.1
ProteinID:AQK71417.1	EMBL:BT066283	UniProt:C0PDB4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF14381	PRINTS:PR00109	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44329	PANTHER:PTHR44329:SF3	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000194B286	EnsemblPlantsGene:Zm00001d016675
EnsemblPlants:Zm00001d016675_P001	EnsemblPlants:Zm00001d016675_T001	SEG:seg	:	:	:

Description

Serine/threonine-protein kinase CTR1

Coordinates

chr5:-:172209653..172221944

Molecular Weight (calculated)

87361.7 Da

IEP (calculated)

6.552

GRAVY (calculated)

-0.222

Length

800 amino acids

Sequence
(BLAST)

001: MMKDAKWPHA VSSAGGRRGP PASSSNAGAS YTLLASSPPS SVRNDGCSPH YPPAPASDDD GLSSFDASVA AAKLPFQQLH RNRPQLGVAD WLPLQRQSSG
101: SSVGGDDGEV SSTVSFTIAN AAEYRYKGDA DRAPSSSSKS WAQQAEEAYN LQLALALRLC SEASAAADPN FLDSSIAAAD HLQPIASPQS LSHRFWVNGC
201: LSYSDKVSDG FYFIQGMDPF IWTLCNDLHD GGRVPTIESL KAVNPTDSAI EVVIVDKVAD YDLRQLISMA IDVSLNRTDS KEIATRLAAV VSTKMGGSVA
301: ATEEHELGPR WRDSVGFLKI SSGSVVLPIG KLSVGFCCHR ALLFKTLADS INLPCRIVKG CKYCKAGAAT SCLVRFGHDR ECLIDLIGNP GFLSEPDSLL
401: NGLSSISVSS PLRPPKHDSA DNSDNFKLFA KKYFLDCQSL NLMFSDPAAG TVIDLDEVMG SNLGLNSSHA TNSDCQATFT HLKAGTRRSS QDGSFIMQRS
501: SQEDTQSGLS DPFSDMSLEI EDLIIPWSEL VLKEKIGAGS FGTVHRADWN GSDVAVKILM EQDFHPERLK EFLREVAIMR SLRHPNIVLL MGAVTQPPNL
601: SIVTEYLSRG SLYRLLHRHA ARENLEERRR LSMAFDVAKG MNYLHKRNPP IVHRDLKSPN LLVDKKYTVK VCDFGLSRLK ANTFLSSKTA AGTPEWMAPE
701: VLRDEPSNEK SDVYSFGVIL WELMTLQQPW SNLNPAQVVA AVGFKGQRLE IPSSVDPKVA AVIESCWVRE PWRRPSFASI MESLKLLIKT LPPNQLLEEN

Best Arabidopsis Sequence Match ( AT5G03730.2 )
(BLAST)

001: MEMPGRRSNY TLLSQFSDDQ VSVSVTGAPP PHYDSLSSEN RSNHNSGNTG KAKAERGGFD WDPSGGGGGD HRLNNQPNRV GNNMYASSLG LQRQSSGSSF
101: GESSLSGDYY MPTLSAAANE IESVGFPQDD GFRLGFGGGG GDLRIQMAAD SAGGSSSGKS WAQQTEESYQ LQLALALRLS SEATCADDPN FLDPVPDESA
201: LRTSPSSAET VSHRFWVNGC LSYYDKVPDG FYMMNGLDPY IWTLCIDLHE SGRIPSIESL RAVDSGVDSS LEAIIVDRRS DPAFKELHNR VHDISCSCIT
301: TKEVVDQLAK LICNRMGGPV IMGEDELVPM WKECIDGLKE IFKVVVPIGS LSVGLCRHRA LLFKVLADII DLPCRIAKGC KYCNRDDAAS CLVRFGLDRE
401: YLVDLVGKPG HLWEPDSLLN GPSSISISSP LRFPRPKPVE PAVDFRLLAK QYFSDSQSLN LVFDPASDDM GFSMFHRQYD NPGGENDALA ENGGGSLPPS
501: ANMPPQNMMR ASNQIEAAPM NAPPISQPVP NRANRELGLD GDDMDIPWCD LNIKEKIGAG SFGTVHRAEW HGSDVAVKIL MEQDFHAERV NEFLREVAIM
601: KRLRHPNIVL FMGAVTQPPN LSIVTEYLSR GSLYRLLHKS GAREQLDERR RLSMAYDVAK GMNYLHNRNP PIVHRDLKSP NLLVDKKYTV KVCDFGLSRL
701: KASTFLSSKS AAGTPEWMAP EVLRDEPSNE KSDVYSFGVI LWELATLQQP WGNLNPAQVV AAVGFKCKRL EIPRNLNPQV AAIIEGCWTN EPWKRPSFAT
801: IMDLLRPLIK SAVPPPNRSD L

Arabidopsis Description

CTR1Serine/threonine-protein kinase CTR1 [Source:UniProtKB/Swiss-Prot;Acc:Q05609]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.