CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90373
KRG90374
KRG92290
KRG96477
KRH27542
KRH34517
KRH36433
KRH68220
KRH68254

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03730.1	KRH27542	AT1G66340.1	12837948
AT5G03730.1	KRH36433	AT1G66340.1	12837948
AT5G03730.1	KRH27542	AT1G66340.1	8417317
AT5G03730.1	KRH36433	AT1G66340.1	8417317
AT5G03730.1	KRH27542	AT1G66340.1	9560288
AT5G03730.1	KRH36433	AT1G66340.1	9560288
AT5G03730.1	KRG96477	AT2G40940.1	9560288
AT5G03730.1	KRH68220	AT2G40940.1	9560288
AT5G03730.1	KRH68254	AT2G47430.1	9560288
AT5G03730.1	KRG90373	AT3G23150.1	12177468
AT5G03730.1	KRG90374	AT3G23150.1	12177468
AT5G03730.1	KRG92290	AT3G23150.1	12177468
AT5G03730.1	KRH34517	AT3G23150.1	12177468

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32650	Soybean	cytosol	95.1	95.1
KRH67846	Soybean	cytosol	73.44	75.8
KRG96132	Soybean	cytosol	73.21	75.74
CDY10360	Canola	cytosol	60.65	69.17
VIT_08s0007g03910.t01	Wine grape	cytosol	70.57	68.93
CDX70289	Canola	cytosol	60.65	67.87
CDX80884	Canola	cytosol	63.76	67.13
Solyc09g009090.2.1	Tomato	cytosol	67.11	67.03
CDY11267	Canola	cytosol	63.52	66.71
Bra005778.1-P	Field mustard	cytosol	63.16	66.42
Bra009514.1-P	Field mustard	plastid	60.29	66.14
AT5G03730.1	Thale cress	cytosol	64.95	66.14
PGSC0003DMT400021612	Potato	cytosol	61.96	65.4
Solyc10g085570.1.1	Tomato	cytosol	61.24	64.56
Solyc10g083610.1.1	Tomato	cytosol	62.08	62.61
Os09t0566550-01	Rice	cytosol, plastid	55.74	62.05
GSMUA_Achr8P07600_001	Banana	cytosol	60.17	60.1
OQU89015	Sorghum	cytosol	54.43	59.55
TraesCS4D01G010200.1	Wheat	plastid	54.43	59.09
TraesCS4B01G012100.1	Wheat	plastid	54.43	58.94
GSMUA_Achr11P...	Banana	cytosol, plastid	54.67	58.89
TraesCS4A01G302000.1	Wheat	plastid	54.43	58.86
HORVU4Hr1G001850.1	Barley	plastid	54.43	58.86
Zm00001d005348_P001	Maize	cytosol	53.83	58.52
GSMUA_Achr11P...	Banana	cytosol	55.5	57.93
KRH71740	Soybean	cytosol	45.1	57.12
Os02t0527600-01	Rice	cytosol	53.23	56.98
KXG30326	Sorghum	cytosol, plastid	53.35	55.47
Zm00001d016675_P001	Maize	cytosol, plastid	52.99	55.38
KRH33179	Soybean	cytosol	23.56	51.71
KRH52965	Soybean	cytosol	23.33	43.53
KRH62249	Soybean	nucleus	43.78	39.48
KRH37879	Soybean	cytosol	8.25	38.33
KRH16862	Soybean	nucleus	43.42	38.13
KRH34027	Soybean	cytosol	35.41	31.83
KRG92780	Soybean	cytosol	35.17	30.25
KRH60519	Soybean	cytosol, plastid	36.12	29.72
KRH39096	Soybean	cytosol, plastid	36.12	29.55
KRH48620	Soybean	cytosol, plastid	36.24	29.53
KRH41805	Soybean	cytosol, plastid	35.89	29.5
KRH15528	Soybean	mitochondrion, plastid	32.06	29.0
KRH05467	Soybean	mitochondrion, plastid	32.3	28.94
KRH50723	Soybean	nucleus	25.84	28.05
KRH36968	Soybean	nucleus	24.28	28.0
KRH02358	Soybean	nucleus	25.72	27.89
KRH27052	Soybean	cytosol	25.48	26.3
KRH22278	Soybean	cytosol	25.24	26.05
KRH77494	Soybean	cytosol	23.92	25.61
KRH44883	Soybean	cytosol	15.31	25.2
KRH55739	Soybean	cytosol	24.4	25.12
KRH25780	Soybean	cytosol	24.28	24.91
KRH13743	Soybean	cytosol	21.29	14.32
KRH43703	Soybean	cytosol	21.17	14.22
KRH13058	Soybean	cytosol	20.57	14.08
KRH34582	Soybean	cytosol	19.62	13.92
KRH43706	Soybean	cytosol	20.81	13.89
KRG92205	Soybean	cytosol	19.26	13.77
KRH13740	Soybean	cytosol	20.45	13.66
KRH18987	Soybean	cytosol	17.7	13.33
KRH02901	Soybean	cytosol	17.34	13.23
KRH46789	Soybean	cytosol	19.14	12.4
KRG99835	Soybean	cytosol	19.14	12.38
KRH12884	Soybean	cytosol	19.02	11.27
KRH03559	Soybean	cytosol	18.54	11.17
KRH44880	Soybean	golgi	4.43	6.5

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100800648	MapMan:11.5.2.2	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:ACUP02008226	InterPro:CTR1
EnsemblPlantsGene:GLYMA_13G151100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1LZF4
InterPro:IPR000719	EnsemblPlants:KRH20027	ProteinID:KRH20027	ProteinID:KRH20027.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PFAM:PF14381	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44329
PANTHER:PTHR44329:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233ADCA	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:26525954..26535657

Molecular Weight (calculated)

92357.5 Da

IEP (calculated)

6.954

GRAVY (calculated)

-0.337

Length

836 amino acids

Sequence
(BLAST)

001: MMEMPARRSN YSLLSQIPDD QFSASAAPSS SGDGKSARAG KSDRAAFDWD LVADHRAANR IGNLYSSIGL QRQSSGSSYG ESSLSGGGDF YAPTLSTAAV
101: SDVDAFGYLH DERSKFSEVA PARIAGSSSG KSWAQQTEES YQLQLALALR LSLHATCADD PNFLDPVPDD AAPRLSSSAE AVSHRFWVNG CLSYSDKIPD
201: GFYLIHGMNS FVWTLCTDLH ENGRIPSVDM LKSVNPCVVS SLEVVMVDRR SDPSLRDLQN NVHNISCTSI TTTDVVDKLS KLVCNRMGGS ASVGEDHFFS
301: IWRDCSNDLK DCLGSVVIPI GSLSVGLCRH RAILFKVLAD AIDLPCRIAK GCKYCKRDDA TSCLVRFGLE REYLVDLIGK PGNLSEPDSL LNGPSSISFS
401: SPLRFPRLKP AEPTIDFRSL AKQYFSDCVS LELVFDNNSA EQFDGKCKDS SNPRPISSDS NRSSHLPLHP QDSHPSSREQ GSETYQSCNA PQNIVDSTLG
501: KYPPPIKHKR PAGIPTPLAL TNTNDDMIEG KRFVEGSQLI PSKHARELNF DMEDLDIPWS DLVLREKIGS GSFGTVHRAE WNGSDVAVKI LMEQDFHAER
601: FKEFLREVAI MKRLRHPNIV LFMGAVTQPP NLSIVTEYLS RGSLYRLLHR SGAKEVLDER RRLGMAYDVA KGMNYLHKRN PPIVHRDLKS PNLLVDKKYT
701: VKVCDFGLSR LKANTFLSSK SAAGTPEWMA PEVLCDEPSN EKSDVYSFGV ILWELATLQQ PWVNLNPAQV VAAVGFKRKR LEIPHDVNPQ VAALIEACWA
801: YEPWKRPSFA SIMDSLRPLL KPPTPQPGRP SMPLLT

Best Arabidopsis Sequence Match ( AT5G03730.2 )
(BLAST)

001: MEMPGRRSNY TLLSQFSDDQ VSVSVTGAPP PHYDSLSSEN RSNHNSGNTG KAKAERGGFD WDPSGGGGGD HRLNNQPNRV GNNMYASSLG LQRQSSGSSF
101: GESSLSGDYY MPTLSAAANE IESVGFPQDD GFRLGFGGGG GDLRIQMAAD SAGGSSSGKS WAQQTEESYQ LQLALALRLS SEATCADDPN FLDPVPDESA
201: LRTSPSSAET VSHRFWVNGC LSYYDKVPDG FYMMNGLDPY IWTLCIDLHE SGRIPSIESL RAVDSGVDSS LEAIIVDRRS DPAFKELHNR VHDISCSCIT
301: TKEVVDQLAK LICNRMGGPV IMGEDELVPM WKECIDGLKE IFKVVVPIGS LSVGLCRHRA LLFKVLADII DLPCRIAKGC KYCNRDDAAS CLVRFGLDRE
401: YLVDLVGKPG HLWEPDSLLN GPSSISISSP LRFPRPKPVE PAVDFRLLAK QYFSDSQSLN LVFDPASDDM GFSMFHRQYD NPGGENDALA ENGGGSLPPS
501: ANMPPQNMMR ASNQIEAAPM NAPPISQPVP NRANRELGLD GDDMDIPWCD LNIKEKIGAG SFGTVHRAEW HGSDVAVKIL MEQDFHAERV NEFLREVAIM
601: KRLRHPNIVL FMGAVTQPPN LSIVTEYLSR GSLYRLLHKS GAREQLDERR RLSMAYDVAK GMNYLHNRNP PIVHRDLKSP NLLVDKKYTV KVCDFGLSRL
701: KASTFLSSKS AAGTPEWMAP EVLRDEPSNE KSDVYSFGVI LWELATLQQP WGNLNPAQVV AAVGFKCKRL EIPRNLNPQV AAIIEGCWTN EPWKRPSFAT
801: IMDLLRPLIK SAVPPPNRSD L

Arabidopsis Description

CTR1Serine/threonine-protein kinase CTR1 [Source:UniProtKB/Swiss-Prot;Acc:Q05609]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.