CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH01105
KRH01108
KRH01109
KRH01110
KRH01111
KRH01112
KRH01151
KRH01301
KRH02218
KRH04114
KRH05330
KRH14048
KRH15706
KRH23852
KRH23856
KRH28617	nucleus
KRH40148
KRH50907
KRH52289
KRH57388
KRH61621
KRH65266
KRH65306
KRH65315
KRH74072
KRH76233
KRH76863	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73660.1	KRH14048	AT1G61520.1	24320620
AT1G73660.1	KRH74072	AT1G61520.1	24320620
AT1G73660.1	KRH28617	AT3G50740.1	24320620
AT1G73660.1	KRH76863	AT3G50740.1	24320620
AT1G73660.1	KRH28617	AT3G50740.1	24320620
AT1G73660.1	KRH76863	AT3G50740.1	24320620
AT1G73660.1	KRH01105	AT4G08850.1	24320620
AT1G73660.1	KRH01108	AT4G08850.1	24320620
AT1G73660.1	KRH01109	AT4G08850.1	24320620
AT1G73660.1	KRH01110	AT4G08850.1	24320620
AT1G73660.1	KRH01111	AT4G08850.1	24320620
AT1G73660.1	KRH01112	AT4G08850.1	24320620
AT1G73660.1	KRH01151	AT4G08850.1	24320620
AT1G73660.1	KRH01301	AT4G08850.1	24320620
AT1G73660.1	KRH23852	AT4G08850.1	24320620
AT1G73660.1	KRH23856	AT4G08850.1	24320620
AT1G73660.1	KRH40148	AT4G08850.1	24320620
AT1G73660.1	KRH65266	AT4G08850.1	24320620
AT1G73660.1	KRH65306	AT4G08850.1	24320620
AT1G73660.1	KRH65315	AT4G08850.1	24320620
AT1G73660.1	KRH76233	AT4G08850.1	24320620
AT1G73660.1	KRH04114	AT4G17250.1	24320620
AT1G73660.1	KRH57388	AT4G17250.1	24320620
AT1G73660.1	KRH05330	AT4G31670.1	24320620
AT1G73660.1	KRH15706	AT4G31670.1	24320620
AT1G73660.1	KRH52289	AT4G31670.1	24320620
AT1G73660.1	KRH61621	AT4G31670.1	24320620
AT1G73660.1	KRH02218	AT5G18580.1	24320620
AT1G73660.1	KRH50907	AT5G18580.1	24320620

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41805	Soybean	cytosol, plastid	95.08	94.99
KRH48620	Soybean	cytosol, plastid	80.22	79.43
KRH39096	Soybean	cytosol, plastid	78.44	77.98
VIT_17s0000g02540.t01	Wine grape	cytosol	74.51	73.28
Solyc06g068980.2.1	Tomato	nucleus	67.42	69.26
Solyc03g119140.2.1	Tomato	extracellular	67.52	66.54
PGSC0003DMT400074057	Potato	cytosol, plastid	58.66	65.71
Bra015976.1-P	Field mustard	cytosol	61.32	64.76
CDX96491	Canola	cytosol	61.32	64.29
AT1G18160.1	Thale cress	cytosol	62.2	63.71
CDX72999	Canola	cytosol	61.32	63.44
Bra025927.1-P	Field mustard	cytosol	61.91	63.34
CDY26183	Canola	cytosol	61.91	63.34
AT1G73660.1	Thale cress	cytosol	63.98	63.11
CDY19193	Canola	cytosol	61.91	63.09
GSMUA_Achr10P...	Banana	cytosol	54.04	60.07
Os06t0232100-02	Rice	plasma membrane	35.04	59.53
HORVU7Hr1G038650.1	Barley	cytosol, plastid	52.26	50.0
TraesCS7A01G190300.1	Wheat	cytosol	52.07	49.72
TraesCS7D01G191400.1	Wheat	cytosol	52.07	49.72
TraesCS7B01G095300.2	Wheat	cytosol, plastid	51.97	49.72
Os02t0743500-02	Rice	plasma membrane	53.35	48.78
Zm00001d044814_P002	Maize	cytosol, plastid	52.66	48.77
KXG19659	Sorghum	cytosol, plastid	51.77	48.57
TraesCS6A01G308500.1	Wheat	cytosol	52.76	48.2
HORVU6Hr1G076070.3	Barley	cytosol	52.46	48.15
TraesCS6D01G287700.1	Wheat	cytosol	52.46	48.06
EES07274	Sorghum	cytosol	52.95	47.86
TraesCS6B01G337200.1	Wheat	cytosol	52.26	47.75
KRH34027	Soybean	cytosol	38.88	42.47
KRH33179	Soybean	cytosol	15.45	41.21
KRH52965	Soybean	cytosol	17.91	40.62
KRH15528	Soybean	mitochondrion, plastid	36.52	40.15
KRG92780	Soybean	cytosol	38.39	40.12
KRH05467	Soybean	mitochondrion, plastid	36.81	40.09
KRH71740	Soybean	cytosol	25.79	39.7
Zm00001d018025_P001	Maize	cytosol	37.01	38.21
KRH67846	Soybean	cytosol	29.23	36.67
KRG96132	Soybean	cytosol	28.84	36.26
KRH32650	Soybean	cytosol	29.82	36.24
KRH20027	Soybean	cytosol	29.72	36.12
KRH37879	Soybean	cytosol	6.4	36.11
KRH62249	Soybean	nucleus	29.13	31.93
KRH16862	Soybean	nucleus	29.33	31.3
KRH36968	Soybean	nucleus	21.56	30.21
KRH02358	Soybean	nucleus	22.64	29.83
KRH50723	Soybean	nucleus	22.44	29.61
KRH27052	Soybean	cytosol	22.34	28.02
KRH22278	Soybean	cytosol	22.15	27.78
KRH55739	Soybean	cytosol	21.85	27.34
KRH25780	Soybean	cytosol	21.85	27.24
KRH77494	Soybean	cytosol	20.57	26.76
KRH44883	Soybean	cytosol	12.01	24.02
KRH13058	Soybean	cytosol	16.93	14.08
KRH02901	Soybean	cytosol	15.06	13.96
KRH13743	Soybean	cytosol	17.03	13.92
KRH43703	Soybean	cytosol	16.93	13.82
KRH18987	Soybean	cytosol	15.06	13.78
KRG92205	Soybean	cytosol	15.55	13.52
KRH13740	Soybean	cytosol	16.63	13.5
KRH34582	Soybean	cytosol	15.55	13.41
KRH43706	Soybean	cytosol	16.54	13.41
KRH46789	Soybean	cytosol	16.93	13.33
KRG99835	Soybean	cytosol	16.63	13.08
KRH03559	Soybean	cytosol	16.44	12.03
KRH12884	Soybean	cytosol	16.04	11.55
KRH44880	Soybean	golgi	3.64	6.5

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100778331	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:ACUP02003367	EnsemblPlantsGene:GLYMA_05G245300
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1K5D0	InterPro:IPR000719	EnsemblPlants:KRH60519
ProteinID:KRH60519	ProteinID:KRH60519.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF14381	PRINTS:PR00109
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44741	PANTHER:PTHR44741:SF2	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233A58F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:41926080..41934226

Molecular Weight (calculated)

110495.0 Da

IEP (calculated)

5.048

GRAVY (calculated)

-0.430

Length

1016 amino acids

Sequence
(BLAST)

0001: MKNILKKLHI MSNQSEDAQG ATSSKSNKSS DGSSSSTAPK KLSNWLHSVS NRQSPSPPSP ILARGERMEP SDSVSSGGLD VVSDSARRDS ESSTSRDPEV
0101: EEEYQIQLAL ELSAKEDPEA VQIEAVKQIS LGSCDPDNTP AEVVAYRYWN YNALGYDDKI SDGFYDLYGI LTESTSARMP SLVDLQGTPT SDDVTWEAVL
0201: VNRAADSSLL KLEQEAMEMA VNSRKDFEVL VDSDLVHKLA IIVADYMGGS VEDPESMSRA WRSLSYSLKA TLGSMVLPLG SLTIGLARHR ALLFKVLADS
0301: LGIPCRLVKG LQYMGSNDVA MNFVKIDGRE YIVDLMAAPG TLIPSDATGS HIEFDDSSFV ASPSSRELDS SHVASFSSGV GSSSEEASDS GTLDKDNKSK
0401: YFGYAGKESD VSGPTTGKEE LKKPSNESKN TPYEEKIIVR DSPSRPNYPY MHGRSPSWTE GISSPAVRRM KVKDVSQYMI DAAKENPNLA QKLHDVLLES
0501: GVVAPPNLFS EIYHGQLSTL TEANFPTEQK DENKQGSVQR ETKTDDNLVP ARFLPPLPHY RVQRKATPST SSHLEHSKPV DGLGTGLPLD SGEAAGQHIS
0601: SQVEATQVKY GKNMPVAAAA AAAAAVVASS MVVAVTKSNA DSNLEIPVAA AATATAAAVV ATTAAVSKQY EQGSRSDGDA EGAGCESKGS GDGEHNALGE
0701: NSEGERKSDR SVSNDSTKSD SALDDVAEYD IPWEEIAVGE RIGLGSYGEV YRGEWHGTEV AVKKFLYQDI SGELLEEFKS EVQIMKRLRH PNVVLFMGAV
0801: TRPPNLSIVS EFLPRGSLYR LIHRPNNQLD ERRRLRMALD AARGMNYLHN CTPVIVHRDL KSPNLLVDKN WVVKVCDFGL SRMKHSTFLS SRSTAGTAEW
0901: MAPEVLRNEL SDEKCDVFSY GVILWELSTL QQPWGGMNPM QVVGAVGFQH RRLDIPDNVD PAIADIIRQC WQTDPKLRPT FAEIMAALKP LQKPITVSQV
1001: HRPIAQSSRI AEDPAG

Best Arabidopsis Sequence Match ( AT1G73660.1 )
(BLAST)

0001: MKVKEETLKN LGDGVVLRPV DHCSSIWSMK MNMKNFLKKL HISPNQSDEA EGSISTTKSN HHKSIDVSSS SSPRSHHSNS PEIKPFSGLS NWLSSVGHRK
0101: IPSPPNSFNA KNRAATVDDT VVVNGSEHVD LGSKDPAVEE ENQIQLALEL SAREDPEATQ IEAIKQFSLG SCAPENSPAE LIAYRYWNYN CLGYDDKILD
0201: GFYDLYGVLN ASSAERIPPL LDLQGTPVSD GVTWEAVLVN RSGDSNLLRL EQMALDIAAK SRSVSSSGFV NSELVRKLAI LVGDYMGGPV VHPESMLRAW
0301: RSLSYSLKAT LGSMVLPLGS LTIGLARHRA LLFKVLCDSV GVPCRIVKGQ QYTGSEDVAM NFIKADDGRE YIVDLMGDPG TLIPADAAGL QIDYDESAYS
0401: ASPGDNDSIH VASSSNGIES SYEENTEFRT GEHRSSTKSS GERNQSGGGG DLIVHPNISR EDVKNQKKVE KAPFQNLSSR PIHSFTHMRS PSWTEGVSSP
0501: AAQRMKVKDV SQYMIDAAKE NPRLAQKLHD VLLESGVVAP PNLFSEVYPQ QLEATVESKN STEAKKERGK DLETTQEGRH QNGFGPVRFL PPLPRVQSKT
0601: NAHDQRDNGK VVSQSDSSHS EASSTEYART VPAAVAAAAV VASSMVAAAA AKSANSDSSP IELPAAAAAT ATAAAVVATA AAVSRQLELG SNSDGDDGSG
0701: GHEPQGSGDS NHGPNSGGER ISDKSIGNES SKSDCDDVSD CEILWEEITV GERIGLGSYG EVYRGDWHGT EVAVKKFLDQ DLTGEALEEF RSEVRIMKKL
0801: RHPNIVLFMG AVTRPPNLSI VTEFLPRGSL YRLIHRPNNQ LDERRRLRMA LDAARGMNYL HSCNPMIVHR DLKSPNLLVD KNWVVKVCDF GLSRMKHSTY
0901: LSSKSTAGTA EWMAPEVLRN EPADEKCDVY SYGVILWELF TLQQPWGKMN PMQVVGAVGF QHRRLDIPDF VDPAIADLIS KCWQTDSKLR PSFAEIMASL
1001: KRLQKPVTGS NIPRPVPSSS SLPTEHEQKD

Arabidopsis Description

SIS8Probable serine/threonine-protein kinase SIS8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.