Factsheet for Solyc03g119140.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g067500.2.1
Solyc04g074000.2.1
Solyc04g074020.2.1
Solyc04g074030.2.1
Solyc04g074050.2.1
Solyc08g069050.2.1
Solyc08g078770.1.1
Solyc08g078780.2.1
Solyc10g007690.2.1
Solyc12g011280.1.1
Solyc12g096430.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73660.1	Solyc10g007690.2.1	AT1G61520.1	24320620
AT1G73660.1	Solyc12g011280.1.1	AT1G61520.1	24320620
AT1G73660.1	Solyc04g074000.2.1	AT4G08850.1	24320620
AT1G73660.1	Solyc04g074020.2.1	AT4G08850.1	24320620
AT1G73660.1	Solyc04g074030.2.1	AT4G08850.1	24320620
AT1G73660.1	Solyc04g074050.2.1	AT4G08850.1	24320620
AT1G73660.1	Solyc08g078770.1.1	AT4G17250.1	24320620
AT1G73660.1	Solyc08g078780.2.1	AT4G17250.1	24320620
AT1G73660.1	Solyc08g069050.2.1	AT4G31670.1	24320620
AT1G73660.1	Solyc12g096430.1.1	AT4G31670.1	24320620
AT1G73660.1	Solyc01g067500.2.1	AT5G18580.1	24320620

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g068980.2.1	Tomato	nucleus	73.42	76.54
VIT_17s0000g02540.t01	Wine grape	cytosol	70.61	70.47
KRH60519	Soybean	cytosol, plastid	66.54	67.52
KRH41805	Soybean	cytosol, plastid	65.37	66.27
KRH39096	Soybean	cytosol, plastid	64.89	65.46
KRH48620	Soybean	cytosol, plastid	64.69	65.01
Bra015976.1-P	Field mustard	cytosol	59.75	64.03
CDX96491	Canola	cytosol	59.75	63.57
CDX72999	Canola	cytosol	59.07	62.02
Bra025927.1-P	Field mustard	cytosol	59.55	61.83
CDY26183	Canola	cytosol	59.55	61.83
CDY19193	Canola	cytosol	59.55	61.58
AT1G73660.1	Thale cress	cytosol	61.3	61.36
AT1G18160.1	Thale cress	cytosol	58.68	60.99
GSMUA_Achr10P...	Banana	cytosol	51.89	58.53
Os06t0232100-02	Rice	plasma membrane	33.17	57.19
HORVU7Hr1G038650.1	Barley	cytosol, plastid	50.63	49.15
TraesCS7D01G191400.1	Wheat	cytosol	50.53	48.97
TraesCS7B01G095300.2	Wheat	cytosol, plastid	50.34	48.87
TraesCS7A01G190300.1	Wheat	cytosol	50.34	48.78
Zm00001d044814_P002	Maize	cytosol, plastid	51.21	48.13
KXG19659	Sorghum	cytosol, plastid	49.95	47.55
Os02t0743500-02	Rice	plasma membrane	51.21	47.52
TraesCS6A01G308500.1	Wheat	cytosol	50.34	46.67
TraesCS6D01G287700.1	Wheat	cytosol	50.05	46.53
TraesCS6B01G337200.1	Wheat	cytosol	49.85	46.22
HORVU6Hr1G076070.3	Barley	cytosol	49.47	46.07
EES07274	Sorghum	cytosol	49.95	45.82
Solyc08g065250.2.1	Tomato	cytosol	31.72	43.83
Solyc12g013980.1.1	Tomato	cytosol	14.36	37.85
Zm00001d018025_P001	Maize	cytosol	35.31	36.99
Solyc01g097980.2.1	Tomato	cytosol, plastid	34.63	36.35
Solyc09g009090.2.1	Tomato	cytosol	29.2	35.96
Solyc10g083610.1.1	Tomato	cytosol	28.71	35.71
Solyc10g085570.1.1	Tomato	cytosol	27.45	35.69
Solyc12g099250.1.1	Tomato	cytosol	22.89	30.81
Solyc01g059860.2.1	Tomato	cytosol	22.7	30.79
Solyc02g076780.2.1	Tomato	cytosol	21.92	30.5
Solyc04g076480.2.1	Tomato	cytosol	27.84	29.96
Solyc07g055130.2.1	Tomato	cytosol	23.38	29.64
Solyc08g007910.2.1	Tomato	nucleus	19.69	28.08
Solyc08g080460.1.1	Tomato	plastid	19.11	26.06
Solyc12g013970.1.1	Tomato	nucleus	8.05	22.86
Solyc07g006760.2.1	Tomato	cytosol	15.62	14.87
Solyc09g091460.2.1	Tomato	nucleus	16.78	14.01
Solyc07g007140.2.1	Tomato	cytosol	16.0	11.66
Solyc02g031860.2.1	Tomato	cytosol	13.58	11.47
Solyc02g031910.2.1	Tomato	cytosol	13.48	11.19

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	UniProt:K4BM63	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF14381	PRINTS:PR00109
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44741	PANTHER:PTHR44741:SF2	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc03g119140.2
EnsemblPlants:Solyc03g119140.2.1	UniParc:UPI00027663D4	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:+:67834700..67846839

Molecular Weight (calculated)

112442.0 Da

IEP (calculated)

5.191

GRAVY (calculated)

-0.435

Length

1031 amino acids

Sequence
(BLAST)

0001: MKNFLRKLHI SSQSEDSEGS KSSAKIKRLS DVLSSERNSN SRSDDNKPFS AISGWLNSVT NRQSPSPPSS SNVSRGNIRM EPSDSASSSG LEAALDAVRR
0101: DSESSNSRGP DIEEEYQIQL ALELSAREDP EAVQIEAVKQ ISLGSCAPEN TAAEIVAYRY WNYNALSFDD KILDGFYDLY GILTESDPSK MPSLIDLQRT
0201: PVADQITWEA IFVDRAADSK LLNLEQKAID LTVKVRSESI GFADKKLVQK LAMLVSEHMG GPVGDPDGML IAWRSLSHSL KATFGSMVLP LGSLTVGLAR
0301: QRALLFKVLA DSVGLPCRLV KGQEYTGSYE VAMNYVKLED GREYIVDLMA DPGTLIPSDT SGTQGDYEES ILSISPSSKD VDSHTGSSSS GVACSSEDHS
0401: EYGTEERKSR FGEISAGNES PSTGNSEKQK GNNNSDDFTK LRTVKEQGPE TSSRTVYARS PYSHTRSPSW TEGISSPAVR RMKAKDVSLY MIDAAKENPQ
0501: LAQKLHDVLL ESGVVAPPNL FTEVYSEQLD SSPVEGKSRP EDMESQGRDE VEKIKSQVDL DCNNFLPPLA YHAQSKVNPR GPFDPHLDGG EVSGQHVSPH
0601: SELAAAKFTK NMPVAAAAAA AAAVVASSMV AAAAKTTYGS KADLPVAAAV TATAAAVVAT TAAVAKQYEN LETSALLPNS PAFLLNLMDS KRVDKDADGA
0701: VPEKRGSGDQ VHEALGVNSE GERVSDRSTG NDSVKSDVTL DDVADCEIPM EEITLGERIG LGSYGEVYRG EWHGTEVAVK KFLDQELTGE SLEEFKSEVM
0801: IMKRLRHPNV VLFMGAVTRP PNLSIVTEFL HRGSLYRLIH RSNNQLDERR RLRMALDAAR GMNYLHNCTP VIVHRDLKSP NLLVDKNWVV KVCDFGLSKI
0901: KHSTFLSSRS TAGTAEWMAP EVLRNEPSDE KCDVYSFGVV LWELCTLQQP WGGMNPMQVV GAVGFQHRRL DIPDDMDPAI ADIIRKCWQT DPKLRPSFAE
1001: IMAALKPLQK PITSSQVPKP LGNRGQEKGR S

Best Arabidopsis Sequence Match ( AT1G73660.1 )
(BLAST)

0001: MKVKEETLKN LGDGVVLRPV DHCSSIWSMK MNMKNFLKKL HISPNQSDEA EGSISTTKSN HHKSIDVSSS SSPRSHHSNS PEIKPFSGLS NWLSSVGHRK
0101: IPSPPNSFNA KNRAATVDDT VVVNGSEHVD LGSKDPAVEE ENQIQLALEL SAREDPEATQ IEAIKQFSLG SCAPENSPAE LIAYRYWNYN CLGYDDKILD
0201: GFYDLYGVLN ASSAERIPPL LDLQGTPVSD GVTWEAVLVN RSGDSNLLRL EQMALDIAAK SRSVSSSGFV NSELVRKLAI LVGDYMGGPV VHPESMLRAW
0301: RSLSYSLKAT LGSMVLPLGS LTIGLARHRA LLFKVLCDSV GVPCRIVKGQ QYTGSEDVAM NFIKADDGRE YIVDLMGDPG TLIPADAAGL QIDYDESAYS
0401: ASPGDNDSIH VASSSNGIES SYEENTEFRT GEHRSSTKSS GERNQSGGGG DLIVHPNISR EDVKNQKKVE KAPFQNLSSR PIHSFTHMRS PSWTEGVSSP
0501: AAQRMKVKDV SQYMIDAAKE NPRLAQKLHD VLLESGVVAP PNLFSEVYPQ QLEATVESKN STEAKKERGK DLETTQEGRH QNGFGPVRFL PPLPRVQSKT
0601: NAHDQRDNGK VVSQSDSSHS EASSTEYART VPAAVAAAAV VASSMVAAAA AKSANSDSSP IELPAAAAAT ATAAAVVATA AAVSRQLELG SNSDGDDGSG
0701: GHEPQGSGDS NHGPNSGGER ISDKSIGNES SKSDCDDVSD CEILWEEITV GERIGLGSYG EVYRGDWHGT EVAVKKFLDQ DLTGEALEEF RSEVRIMKKL
0801: RHPNIVLFMG AVTRPPNLSI VTEFLPRGSL YRLIHRPNNQ LDERRRLRMA LDAARGMNYL HSCNPMIVHR DLKSPNLLVD KNWVVKVCDF GLSRMKHSTY
0901: LSSKSTAGTA EWMAPEVLRN EPADEKCDVY SYGVILWELF TLQQPWGKMN PMQVVGAVGF QHRRLDIPDF VDPAIADLIS KCWQTDSKLR PSFAEIMASL
1001: KRLQKPVTGS NIPRPVPSSS SLPTEHEQKD

Arabidopsis Description

SIS8Probable serine/threonine-protein kinase SIS8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.