Factsheet for Os06t0232100-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0515300-01
Os01t0620800-01	nucleus
Os02t0197600-01
Os02t0242100-01	nucleus
Os02t0242550-00	nucleus
Os02t0242900-00	nucleus
Os02t0243300-01	nucleus
Os02t0277700-01
Os02t0553000-01
Os05t0215300-01	nucleus
Os06t0654000-01
Os11t0599200-01	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73660.1	Os02t0197600-01	AT1G61520.1	24320620
AT1G73660.1	Os01t0620800-01	AT3G50740.1	24320620
AT1G73660.1	Os02t0242100-01	AT3G50740.1	24320620
AT1G73660.1	Os02t0242550-00	AT3G50740.1	24320620
AT1G73660.1	Os02t0242900-00	AT3G50740.1	24320620
AT1G73660.1	Os02t0243300-01	AT3G50740.1	24320620
AT1G73660.1	Os05t0215300-01	AT3G50740.1	24320620
AT1G73660.1	Os11t0599200-01	AT3G50740.1	24320620
AT1G73660.1	Os01t0620800-01	AT3G50740.1	24320620
AT1G73660.1	Os02t0242100-01	AT3G50740.1	24320620
AT1G73660.1	Os02t0242550-00	AT3G50740.1	24320620
AT1G73660.1	Os02t0242900-00	AT3G50740.1	24320620
AT1G73660.1	Os02t0243300-01	AT3G50740.1	24320620
AT1G73660.1	Os05t0215300-01	AT3G50740.1	24320620
AT1G73660.1	Os11t0599200-01	AT3G50740.1	24320620
AT1G73660.1	Os01t0515300-01	AT4G08850.1	24320620
AT1G73660.1	Os02t0277700-01	AT4G08850.1	24320620
AT1G73660.1	Os02t0553000-01	AT4G08850.1	24320620
AT1G73660.1	Os06t0654000-01	AT4G31670.1	24320620

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G095300.2	Wheat	cytosol, plastid	80.6	45.39
TraesCS7D01G191400.1	Wheat	cytosol	80.27	45.11
TraesCS7A01G190300.1	Wheat	cytosol	80.27	45.11
KXG19659	Sorghum	cytosol, plastid	81.61	45.06
Zm00001d044814_P002	Maize	cytosol, plastid	82.27	44.85
HORVU7Hr1G038650.1	Barley	cytosol, plastid	79.1	44.54
Os02t0743500-02	Rice	plasma membrane	77.93	41.94
GSMUA_Achr10P...	Banana	cytosol	59.36	38.84
VIT_17s0000g02540.t01	Wine grape	cytosol	60.7	35.14
KRH60519	Soybean	cytosol, plastid	59.53	35.04
Os12t0562600-01	Rice	cytosol	4.35	34.67
KRH41805	Soybean	cytosol, plastid	58.7	34.51
Solyc06g068980.2.1	Tomato	nucleus	55.35	33.47
Bra015976.1-P	Field mustard	cytosol	53.51	33.26
Solyc03g119140.2.1	Tomato	extracellular	57.19	33.17
KRH39096	Soybean	cytosol, plastid	56.52	33.07
KRH48620	Soybean	cytosol, plastid	56.69	33.04
CDX96491	Canola	cytosol	53.51	33.02
CDX72999	Canola	cytosol	53.68	32.69
AT1G18160.1	Thale cress	cytosol	54.01	32.56
CDY26183	Canola	cytosol	53.34	32.12
Bra025927.1-P	Field mustard	cytosol	53.34	32.12
CDY19193	Canola	cytosol	53.34	32.0
AT1G73660.1	Thale cress	cytosol	53.01	30.78
PGSC0003DMT400074057	Potato	cytosol, plastid	42.47	28.0
Os07t0438550-01	Rice	cytosol	3.51	28.0
Os09t0566550-01	Rice	cytosol, plastid	31.44	25.03
Os10t0430900-01	Rice	cytosol	38.46	23.66
Os06t0181200-01	Rice	cytosol	18.56	23.42
Os04t0610900-01	Rice	mitochondrion	30.43	23.39
Os03t0160100-01	Rice	nucleus	39.46	23.21
Os02t0527600-01	Rice	cytosol	30.27	23.18
Os02t0241600-01	Rice	plasma membrane	26.25	19.87
Os01t0674100-02	Rice	cytosol	26.59	19.85
Os02t0220700-01	Rice	plasma membrane	25.59	19.25
Os12t0562500-00	Rice	cytosol, plasma membrane	10.2	13.35
Os12t0594300-00	Rice	cytosol	20.74	10.78
Os06t0646400-01	Rice	plasma membrane	19.23	10.34
Os02t0786200-01	Rice	plasma membrane	8.53	6.51
Os03t0401100-01	Rice	plasma membrane	4.68	4.41
Os07t0438500-01	Rice	plasma membrane	1.84	1.28
Os12t0594200-00	Rice	cytosol	0.0	0.0
Os11t0678000-01	Rice	cytosol	0.0	0.0
Os06t0181100-01	Rice	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	ProteinID:BAF19139.1	ProteinID:BAS96918.1	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009856	GO:GO:0009875	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	GO:GO:0048544	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EnsemblPlantsGene:Os06g0232100	EnsemblPlants:Os06t0232100-02	PFAM:PF07714	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR44741	PANTHER:PTHR44741:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q0DDD4
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0000E12723	SEG:seg

Description

Hypothetical conserved gene. (Os06t0232100-01);Protein kinase, core domain containing protein. (Os06t0232100-02);Hypothetical conserved gene. (Os06t0232100-03);Similar to predicted protein. (Os06t0232100-04)

Coordinates

chr6:-:6823036..6830018

Molecular Weight (calculated)

66203.7 Da

IEP (calculated)

5.925

GRAVY (calculated)

-0.384

Length

598 amino acids

Sequence
(BLAST)

001: MSTQSKDKSS AANNSSSSSP SSSEVGGAPA VRRMKVKDVS EYMISAAKEN PQIAERIHAV LLENGVVPPP DLFSEESREQ PKDLIVYDTS LFQTKDEMIK
101: RMNELESTTN ADFCHGPSVP HPPGHELQTK AVPYRIPLDL KPIQGLGTYH PSDSRNSTGS SHMYEPSAPP QEDPLQLIKQ MPVAAAAVAT AAVVASSMVV
201: AAAKSNSDIK LDVPVAAAAT AAAVVATTAA VNKQYEYLEP GCQLLSLPSS SGANELIPKG RHDFWDNQLE IDHGQTSVPE KEKDLVEVPQ EAERVSDKSV
301: GTESSRSDIA LDGVAEFEIQ WEEITLGERV GLGSFGEVYK GEWHGTEVAV KKFLQQDISS DALDEFRTEF QIMKRLRHPN VVLFMGAVTR VPNLSIVTEF
401: LPRGSLFRLI HRPNNQLDER RRLRMALDVA RGMNYLHNCS PVVVHRDLKS PNLLVDKNWV VKVCDFGLSR MKNSTFLSSR STAGTAEWMA PEVLRNEPSD
501: EKCDVFSYGV ILWELFTLLQ PWEGMNPMQV VGAVGFQQRR LDIPAHVDPT IAEIIRRCWQ TDPKMRPSFS EIMSSLKPLL KNTLANQPQR QRVQRADG

Best Arabidopsis Sequence Match ( AT1G18160.1 )
(BLAST)

001: MKMNMKKFLK KLRITPNQRD DGEGSVSNRS NKSSDAEPSP SDSLRSQDNS EFKPFLGLSN WLSSVTHRKS PSSSNATNSK EDDTTMEHGG PVGSESGMQG
101: LGSSSNSKDP EVEEEYQIQL ALELSAREDP EAAQIEAMKQ FSLGSRPSAP ENTPAELMAY RYWNYNCLGY DDKIVDGFYD LCGVMNESSL KRIPPLVDLQ
201: GTLVSDGVTW DAVLVNSSKD SNLLRLEQMA LDIAAKSKSA SSSGFVNSEL VRQLAVLVAD YMGGPVLDPD STLRAWWSLS YSLKATLRSM VLPLGSLTIG
301: LARHRALLFK VLCDSVGVPC RIVKGQQYTG SDDVAMNSIK TDDGREYIVD LMGDPGTLIP ADAAGLQMDF DDSVYSASPR DVDSSHVASS SSGVESSIEE
401: HTESWSAEHR SRTKGSREEN QSAGGGDLMI PNIREAVGSQ KAPVQHLSSK PTHSFTHARS PSWTEGVSSP AGRRMKVKDV SQYMIDAAKE NPQLAQKLHD
501: VLLESGVVAP RNLFSEVYSE SMEATGEIKS VAESNDEKGK DFGTIQQGRN QSNLGPVRFL PPLPRPQSKA ITHDLREHSG SGLGHLSEHC NIDGHSDSSH
601: SETSTDYPRN VPVAVAAAAV VASSMVVAAA KSANSDSSTL ELSAAAAAAV MATAAAVSRQ FELDSLSNGD AGSGGLHGVD SGGERISDRS IGNESSKSDA
701: AIDDVAECEI LWEEITVAER IGLGSYGEVY RGDWHGTAVA VKKFIDQDIT GEALEEFRSE VRMMRRLRHP NIVLFMGAVT RPPNLSIVTE FLPRGSLYRL
801: IHRPNNQLDE RKRLRMALDA ARGMNYLHSC NPVIVHRDLK SPNLLVDKNW VVKVCDFGLS RMKVSTYLSS KSTAGTAEWM APEVLRNEPA DEKCDVYSYG
901: VILWELFTLQ QPWGKMNPMQ VVGAVGFQHR RLDIPEFVDP GIADIIRKCW QTDPRLRPSF GEIMDSLKQL QKPIQRAAVP SSSALTTDEQ EQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.