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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:mitochondrion
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G039740.6 Barley mitochondrion 71.95 65.97
TraesCS6A01G186100.1 Wheat mitochondrion 71.32 65.47
TraesCS6B01G215100.2 Wheat mitochondrion 70.44 65.12
Zm00001d053575_P005 Maize mitochondrion 69.18 64.86
TraesCS6D01G173100.2 Wheat mitochondrion 70.57 64.86
OQU84648 Sorghum mitochondrion 71.32 64.58
GSMUA_Achr2P16720_001 Banana cytosol 44.53 45.62
GSMUA_Achr7P09040_001 Banana mitochondrion 48.05 42.92
CDY67589 Canola cytosol, plastid 39.62 38.99
AT5G11850.1 Thale cress mitochondrion 40.75 36.82
Solyc08g065250.2.1 Tomato cytosol 33.96 36.19
CDX70425 Canola plastid 39.87 36.1
CDX91190 Canola plastid 40.25 35.96
Bra023347.1-P Field mustard plastid 40.13 35.84
VIT_04s0008g01310.t01 Wine grape cytosol, mitochondrion 40.38 35.12
CDX78447 Canola cytosol, plastid 39.75 34.42
KRH15528 Soybean mitochondrion, plastid 38.87 33.44
KRH05467 Soybean mitochondrion, plastid 39.12 33.33
Bra006122.1-P Field mustard cytosol, mitochondrion 40.13 30.56
Os03t0160100-01 Rice nucleus 37.99 29.7
Os09t0566550-01 Rice cytosol, plastid 27.04 28.63
Os10t0430900-01 Rice cytosol 34.59 28.29
Os02t0527600-01 Rice cytosol 26.92 27.4
Os02t0743500-02 Rice plasma membrane 37.23 26.64
Os04t0610900-01 Rice mitochondrion 25.66 26.22
Os06t0232100-02 Rice plasma membrane 19.25 25.59
Os01t0674100-02 Rice cytosol 19.62 19.48
Os02t0241600-01 Rice plasma membrane 18.74 18.86
Os06t0181200-01 Rice cytosol 10.69 17.93
Os12t0562500-00 Rice cytosol, plasma membrane 10.19 17.72
CDX91799 Canola cytosol, plasma membrane, plastid 9.94 15.55
Os11t0678000-01 Rice cytosol 4.53 14.81
Os12t0594300-00 Rice cytosol 14.72 10.17
Os06t0646400-01 Rice plasma membrane 13.71 9.8
Os03t0401100-01 Rice plasma membrane 6.54 8.19
CDX91191 Canola extracellular, plasma membrane 0.88 7.14
Os06t0181100-01 Rice nucleus 4.4 6.99
Os12t0562600-01 Rice cytosol 0.63 6.67
Os02t0786200-01 Rice plasma membrane 5.53 5.61
Os07t0438550-01 Rice cytosol 0.5 5.33
Os07t0438500-01 Rice plasma membrane 5.53 5.1
CDX70426 Canola cytosol 0.88 2.25
Os12t0594200-00 Rice cytosol 0.13 0.09
Protein Annotations
Gene3D:1.10.510.10Gene3D:3.30.200.20MapMan:50.2.7EMBL:AK243248UniProt:B7FA58ProteinID:BAS77701.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004871
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
GO:GO:0035556InterPro:IPR000719InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os02g0220700EnsemblPlants:Os02t0220700-01PFAM:PF07714
PFAM:PF14381ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR44741InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI000188B036
SEG:seg:::::
Description
Hypothetical conserved gene. (Os02t0220700-01)
Coordinates
chr2:-:6726465..6733496
Molecular Weight (calculated)
86075.3 Da
IEP (calculated)
6.228
GRAVY (calculated)
-0.235
Length
795 amino acids
Sequence
(BLAST)
001: MSRMKHLLRK LHLSGGGGSG GGAAAAGAPS GEHHHRPRQH RRSSAQPPPL PPPPVVAAAA AAEAAPVMAP VAAPVAAAAA EPRGMGADAT MTRLEEEYQV
101: RLALAISASD HAGLVDADSV QIRAAERISL GGAAGDRGPM EALSARYWNH CVVNYDERLS DGFYDVCGAP MHPHFQAKFP SLTTLRAVPV GGDAAYVAVL
201: VNRERDPALK RLEGRALAIA AQDRAEHGGV ASPELVQKIA NLVVDAMGGP VDDADEMNRE WGVKSRALCL QRNSIVLPLG LLRIGLSRHR SLLFKVLADR
301: VNLPCKLVKG IYYTGTDEGA INLVKIDFDS VEYIVDLMGA PGTLIPSDIS GSQFQDSNNS QLSNDAIEES VAELCIALEQ ISAGCKNTSD MGGSSSEQKS
401: ALALASSQLE DIFHTENPLK QSTISDGGEI PHLMKVNDAP MYLVPTEVDP QFAQNLQDLL LEGTALLPTY EKPEICKHTA SEDDKTAGWL VIAKTGQNLP
501: NGHVAEDSPL QHGNTKTLAV VNCFHEDAQH DVGNTEAIGR NLDLHDHTAH AIANEDQRFS EDSLVKMPGS SNGNLDKSSC SSTKTISSVI DDVADYEIPW
601: EDLHIGERIG LGSYGEVYHA DWNGTEVAVK KFLDQDLSGV ALDQFKCEVG IMSRLRHPNV VLFLGYVTQP PNLSILTEYL PRGSLYRLLH RPNSQIDETR
701: RLKMALDVAK GMNYLHASHP TIVHRDLKSP NLLVDKNWVV KVSDFGMSRL KHHTFLSSKS TAGTVISLML CRSGWHQRFY VMSHQMRSVT YTVLE
Best Arabidopsis Sequence Match ( AT5G11850.1 )
(BLAST)
001: MSKMKHLLRK LHIGGSSGVG GGFADHHRLD DSTRPMIDPS PILSTSPSPA STSSVSSSGF GNASTTMPRL DTFEPVGRDL TAVDGVDFNL MEEEYQVQLA
101: MAISVSDPDP RENADTAQLD AAKRISLGVS APVTDADSAV DFLSLRYWGH KVINYDQKVR DGFYDVYGIT SNSLSQGKMP LLVDLQAISI SDNVDYEVIL
201: VNRLIDPELQ ELERRVFALA SECPDFAPGQ VSSDLTQKIA NIVVEQMGGP VENADEALRR WMLRSYELRN SLNTTILPLG RVNVGLARHR ALLFKVLADR
301: INLPCMLVKG SYYTGTDDGA VNLIKLDDKS EYIIDLMGAP GALIPSEVPS SFLPVSCTDT RVFPENLDSL QHSSPVLEKE IETPAFSVSK EADSRSGMVA
401: NFFTGNQEEN SDRCAVEKHQ TERFEHDFGK LMHSQQISGE NMPPFSGKPT CAQKVKVKNV SKYVISAAKN PEFAQKLHAV LLESGASPPP DLFMDINPHN
501: LRGKNLLQEL RQESSNSMVS GIPCYPEKVA EQLRESERNP TAESYQQSVE VDLSMKRNFD LDNTGKASSS ENMEVGTADG ESAVCDSHDQ GINPLLGEAA
601: KWEIMWEDLQ IGERIGIGSY GEVYRAEWNG TEVAVKKFLD QDFSGDALTQ FKSEIEIMLR LRHPNVVLFM GAVTRPPNFS ILTEFLPRGS LYRLLHRPNH
701: QLDEKRRMRM ALDVAKGMNY LHTSHPTVVH RDLKSPNLLV DKNWVVKVCD FGLSRMKHHT YLSSKSTAGT PEWMAPEVLR NEPANEKCDV YSFGVILWEL
801: ATSRVPWKGL NPMQVVGAVG FQNRRLEIPD DIDLTVAQII RECWQTEPHL RPSFTQLMQS LKRLQGLNIS NRANTSESLM
Arabidopsis Description
AT5g11850/F14F18_20 [Source:UniProtKB/TrEMBL;Acc:Q8S9K4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.