Factsheet for VIT_04s0008g01310.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91191	Canola	extracellular, plasma membrane	7.22	67.35
GSMUA_Achr2P16720_001	Banana	cytosol	45.84	53.99
Solyc08g065250.2.1	Tomato	cytosol	42.89	52.55
AT5G11850.1	Thale cress	mitochondrion	49.12	51.02
CDX91190	Canola	plastid	49.56	50.9
CDX70425	Canola	plastid	48.8	50.8
Bra023347.1-P	Field mustard	plastid	49.34	50.67
CDY67589	Canola	cytosol, plastid	44.31	50.12
GSMUA_Achr7P09040_001	Banana	mitochondrion	47.59	48.88
CDX78447	Canola	cytosol, plastid	49.02	48.8
KRH05467	Soybean	mitochondrion, plastid	49.02	48.02
KRH15528	Soybean	mitochondrion, plastid	48.25	47.73
TraesCS6B01G215100.2	Wheat	mitochondrion	43.11	45.81
TraesCS6D01G173100.2	Wheat	mitochondrion	43.22	45.66
TraesCS6A01G186100.1	Wheat	mitochondrion	43.22	45.61
Zm00001d053575_P005	Maize	mitochondrion	42.12	45.4
HORVU6Hr1G039740.6	Barley	mitochondrion	43.0	45.33
OQU84648	Sorghum	mitochondrion	42.01	43.74
Bra006122.1-P	Field mustard	cytosol, mitochondrion	49.02	42.91
VIT_14s0030g01440.t01	Wine grape	cytosol, plastid	46.28	42.9
Os02t0220700-01	Rice	plasma membrane	35.12	40.38
VIT_17s0000g02540.t01	Wine grape	cytosol	39.72	35.14
VIT_13s0074g00430.t01	Wine grape	cytosol	28.45	34.3
VIT_08s0007g03910.t01	Wine grape	cytosol	29.76	31.78
VIT_18s0001g07700.t01	Wine grape	cytosol	28.56	28.84
CDX91799	Canola	cytosol, plasma membrane, plastid	15.43	27.76
VIT_05s0077g00920.t01	Wine grape	cytosol	22.65	26.85
VIT_02s0025g04110.t01	Wine grape	cytosol	17.51	25.64
VIT_12s0028g02130.t01	Wine grape	cytosol	22.43	25.09
VIT_19s0085g00550.t01	Wine grape	cytosol	16.85	13.17
VIT_05s0051g00660.t01	Wine grape	cytosol	17.4	13.06
VIT_11s0052g01480.t01	Wine grape	cytosol	16.19	13.03
VIT_01s0011g01490.t01	Wine grape	cytosol	15.97	11.79
VIT_11s0118g00790.t01	Wine grape	cytosol	16.85	10.81
VIT_11s0016g04880.t01	Wine grape	mitochondrion	12.04	10.77
CDX70426	Canola	cytosol	0.77	2.25

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100264622	wikigene:100264622	MapMan:18.4.1.30	Gene3D:3.30.200.20	ProteinID:CCB46576
ProteinID:CCB46576.1	UniProt:F6H3P3	EMBL:FN595231	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100264622	wikigene:LOC100264622
PFAM:PF07714	PFAM:PF14381	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44741	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TIGR:TC56040	TIGR:TC61061	UniParc:UPI0002109552	ArrayExpress:VIT_04s0008g01310	EnsemblPlantsGene:VIT_04s0008g01310
EnsemblPlants:VIT_04s0008g01310.t01	unigene:Vvi.23197	RefSeq:XP_002279319	RefSeq:XP_002279319.2	RefSeq:XP_010648359.1	SEG:seg

Description

No Description!

Coordinates

chr4:+:1079716..1090458

Molecular Weight (calculated)

101115.0 Da

IEP (calculated)

5.124

GRAVY (calculated)

-0.266

Length

914 amino acids

Sequence
(BLAST)

001: MSRMKHLLRK LHIGGSLNEH QRIPETRPVI NPSPSPNQSS PVAAAAPSSA LGSVGGGDAV DRAAVDSQDA AVDFSFLEEE FQVQLALAIS ASDPDARDDR
101: ETAQIKVAKR ISLGCSPSTT DTETLVELLS LRYWNYNAVN YDEKVMDGFY DVYGITANSV VQGKMPLLVD LQAISVLDNV DYEVILVDRM IDPDLRELED
201: KAYSLSMEYQ VSDQLTILDG LVQKIADMVV ERMGGPVGDA DEMLKRWTIR SYELRSSLNT IILPLGRLDI GLSRHRALLF KVLADRINLP CLLVKGSYYT
301: GTDDGAINLI KIDNGSEYII DLMGAPGALI PAEVPSSHHQ NFGLDVRSCT DVIEAARESL LVPEKGTGFS PNLDVVSKPG SSKSEEAPFI GIRSKGDDRS
401: PVEKFETERF ENEFGNLLPS LRKLCEGSSG TCGKASPAQK MKVKDVSKYV ISAAKNPEFA QKLHAVLLES GASPPPDLFS DINSRGQVEQ KVLEQIHMAK
501: GKQVDHGVWY SPGEFLLNSE QPLMPSHQVE TNVTNSDFSL PSDTTSEGFI LIGAGANGMI RTNATGETCQ RQPENALVSD GGPCFQDNIG RILSNIGTEK
601: ESALGLMETA NGALHIPSNA HSEQINPMLA EVAEWEIPWE DLQIGERIGI GSYGEVYRAD WNGTEVAVKK FLAQDFSGDA LVQFRYEVEI MLRLRHPNVV
701: LFMGAVTRPP NLSILTEFLP RGSLYRLLHR SNIQLDEKRR LRMALDVAKG MNYLHTSHPT IVHRDLKSPN LLVDKNWVVK VCDFGLSRLK HHTFLSSKST
801: AGTPEWMAPE VLRNEPSNEK CDVYSFGVIL WELATLRIPW SGMNPMQVVG AVGFQDRRLE IPEEVDPMVA QIINDCWEVE PRKRPSFSQL MSRLKHLQHL
901: VFERASSSRQ AQVQ

Best Arabidopsis Sequence Match ( AT5G11850.1 )
(BLAST)

001: MSKMKHLLRK LHIGGSSGVG GGFADHHRLD DSTRPMIDPS PILSTSPSPA STSSVSSSGF GNASTTMPRL DTFEPVGRDL TAVDGVDFNL MEEEYQVQLA
101: MAISVSDPDP RENADTAQLD AAKRISLGVS APVTDADSAV DFLSLRYWGH KVINYDQKVR DGFYDVYGIT SNSLSQGKMP LLVDLQAISI SDNVDYEVIL
201: VNRLIDPELQ ELERRVFALA SECPDFAPGQ VSSDLTQKIA NIVVEQMGGP VENADEALRR WMLRSYELRN SLNTTILPLG RVNVGLARHR ALLFKVLADR
301: INLPCMLVKG SYYTGTDDGA VNLIKLDDKS EYIIDLMGAP GALIPSEVPS SFLPVSCTDT RVFPENLDSL QHSSPVLEKE IETPAFSVSK EADSRSGMVA
401: NFFTGNQEEN SDRCAVEKHQ TERFEHDFGK LMHSQQISGE NMPPFSGKPT CAQKVKVKNV SKYVISAAKN PEFAQKLHAV LLESGASPPP DLFMDINPHN
501: LRGKNLLQEL RQESSNSMVS GIPCYPEKVA EQLRESERNP TAESYQQSVE VDLSMKRNFD LDNTGKASSS ENMEVGTADG ESAVCDSHDQ GINPLLGEAA
601: KWEIMWEDLQ IGERIGIGSY GEVYRAEWNG TEVAVKKFLD QDFSGDALTQ FKSEIEIMLR LRHPNVVLFM GAVTRPPNFS ILTEFLPRGS LYRLLHRPNH
701: QLDEKRRMRM ALDVAKGMNY LHTSHPTVVH RDLKSPNLLV DKNWVVKVCD FGLSRMKHHT YLSSKSTAGT PEWMAPEVLR NEPANEKCDV YSFGVILWEL
801: ATSRVPWKGL NPMQVVGAVG FQNRRLEIPD DIDLTVAQII RECWQTEPHL RPSFTQLMQS LKRLQGLNIS NRANTSESLM

Arabidopsis Description

AT5g11850/F14F18_20 [Source:UniProtKB/TrEMBL;Acc:Q8S9K4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.