Factsheet for VIT_02s0025g04110.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77494	Soybean	cytosol	52.24	41.74
Solyc08g007910.2.1	Tomato	nucleus	47.92	41.36
PGSC0003DMT400014794	Potato	cytosol	47.44	41.11
PGSC0003DMT400007850	Potato	nucleus	42.47	39.79
CDX94149	Canola	cytosol	39.74	38.45
Solyc08g080460.1.1	Tomato	plastid	45.51	37.57
Bra019338.1-P	Field mustard	cytosol	41.67	35.67
CDX98785	Canola	cytosol	41.67	35.67
AT4G23050.2	Thale cress	cytosol	41.35	35.05
VIT_05s0077g00920.t01	Wine grape	cytosol	30.13	24.38
VIT_13s0074g00430.t01	Wine grape	cytosol	23.72	19.53
VIT_08s0007g03910.t01	Wine grape	cytosol	25.8	18.81
VIT_18s0001g07700.t01	Wine grape	cytosol	25.48	17.57
VIT_04s0008g01310.t01	Wine grape	cytosol, mitochondrion	25.64	17.51
VIT_17s0000g02540.t01	Wine grape	cytosol	27.88	16.84
VIT_14s0030g01440.t01	Wine grape	cytosol, plastid	25.64	16.23
VIT_12s0028g02130.t01	Wine grape	cytosol	18.59	14.2
VIT_19s0085g00550.t01	Wine grape	cytosol	19.71	10.52
VIT_11s0016g04880.t01	Wine grape	mitochondrion	15.87	9.7
VIT_11s0052g01480.t01	Wine grape	cytosol	17.47	9.6
VIT_05s0051g00660.t01	Wine grape	cytosol	18.43	9.45
VIT_01s0011g01490.t01	Wine grape	cytosol	18.27	9.21
VIT_11s0118g00790.t01	Wine grape	cytosol	17.15	7.51

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100244444	wikigene:100244444	MapMan:18.4.1.30	Gene3D:3.30.200.20	Gene3D:3.30.450.20
ProteinID:CCB58378	ProteinID:CCB58378.1	ncoils:Coil	UniProt:F6HUF5	EMBL:FN596251	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000014
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100244444	wikigene:LOC100244444	InterPro:PAS	InterPro:PAS-like_dom_sf
InterPro:PAS_fold	PFAM:PF00989	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50112	PANTHER:PTHR44676	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF55785
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	UniParc:UPI000210830D	ArrayExpress:VIT_02s0025g04110
EnsemblPlantsGene:VIT_02s0025g04110	EnsemblPlants:VIT_02s0025g04110.t01	RefSeq:XP_002276689	RefSeq:XP_002276689.1	SEG:seg	:

Description

No Description!

Coordinates

chr2:+:3631707..3639329

Molecular Weight (calculated)

70226.5 Da

IEP (calculated)

7.726

GRAVY (calculated)

-0.670

Length

624 amino acids

Sequence
(BLAST)

001: MAADDVYRAL MDRFRSLEQS QANMRAQLEV LMEERSKEEK DGGTLWPDSG WGHVPGYFSG GGPCRSVLDS MGHSVYAFTP WSGEIFFWNR SAEKLYGWKD
101: CEVLGQRVVD VLIDEAYYTH VKKIMEKLTN GQSWSGQFPL KKRSGEIFMA IVTKSPLYED GDFVGVITVS SDAALFNNIT SQYLRAYEDH ANCQHRVREL
201: NLKKIQWQSQ PQIASSVSNP ASKVLSQNCG EDACNPFASS QEKGKNMLDA KDKSSEKSET LAAKVLAKLR IRGSGKNAKE DDRSFQQNNS SYSSVCNEVI
301: KEPNYHRDAK ESCPNCRNFD TRYKGENPKK KIVSFAAERE YSNGNEHRIP NTPGEGSSKE CHNCFAVPRL RCSSPILTFQ LDAKESEPEL EDLKVLGIQS
401: SVQQHPDVNQ SPGTGGSINS NNGSSSSKTD SESSSVSDCE IQWEDLHFGE EIGRGSYAAV YHGIWNGSDV AIKVYFGNEY SEGTLQDYKK EIDIMRRLRH
501: PNVLLFMGAV YSQERLAIVT ELLPRGSLFR VLHKSNQVLD IRRRLRMALD VARGMNYLHH RNPPIVHRDL KSSNLLVDKN WNVKVGDFGL SKLKHTTFLT
601: AKSGRGTPQW MAPEVLRNDP SNEK

Best Arabidopsis Sequence Match ( AT4G23050.1 )
(BLAST)

001: MAGNNSESSL YQVLVEWCQR METSQARLRE DVDDLLLQEE SRTGKESATG LETDTEKEAE VEVEAEAADS WDNPTATWER AVSGFYFADS AYRTLMDSMG
101: HAIHVTSAAS GEITFWSRSA ENLYHWYAEE VVGYRTIDVL VTEEYRNSLT GIRNRVCRGE TWTGQFPFQK KTGELFMALV TKSPVYENGE LVGVVTVSSD
201: ATLFNRMHPL SNEHQQQARS NNRHESNLRK HQWHLPRPQI AAASQVPVVP QYSSAVASNL ASKLLPQRNG DDSFNGNHNS RSRDENVPVV ASTTFEKYGS
301: LADKFLGKLQ RKITGSQGTE DNEPILRNGI NKSACGSGGS SKASNAVTCT AFRDNGNGKP KRAEVRISDV YGNGAEGLIH NGDRFQYIGN LGQSKPPRGL
401: ESGLVSGMRG TKMSDLNGEI EDAWNTRLSV DPLPILGVNS GRQQSPVNQR NNRLVTDSSC EIRWEDLQLG EEVGRGSFAA VHRGVWNGSD VAIKVYFDGD
501: YNAMTLTECK KEINIMKKLR HPNVLLFMGA VCTEEKSAII MEYMPRGSLF KILHNTNQPL DKKRRLRMAL DVARGMNYLH RRNPPIVHRD LKSSNLLVDK
601: NWNVKVGDFG LSKWKNATFL STKSGKGTPQ WMAPEVLRSE PSNEKCDVFS FGVILWELMT TLVPWDRLNS IQVVGVVGFM DRRLDLPEGL NPRIASIIQD
701: CWQTDPAKRP SFEELISQMM SLFRKPGSGA QEEDD

Arabidopsis Description

PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:O82754]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.