Factsheet for VIT_14s0030g01440.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_13s0084g00680.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G08720.1	VIT_13s0084g00680.t01	AT5G13530.1	21343429

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34027	Soybean	cytosol	63.79	67.63
KRG92780	Soybean	cytosol	65.11	66.05
Solyc01g097980.2.1	Tomato	cytosol, plastid	61.36	61.61
CDY22667	Canola	cytosol	52.33	60.28
GSMUA_Achr1P14150_001	Banana	cytosol, plastid	51.01	60.24
GSMUA_Achr2P08840_001	Banana	cytosol, plastid	53.96	59.11
AT1G08720.1	Thale cress	cytosol	53.55	56.59
EER95467	Sorghum	plastid	51.62	50.65
Zm00001d048430_P002	Maize	cytosol, plastid	50.91	50.45
Zm00001d027743_P002	Maize	cytosol, plastid	51.22	50.4
Os03t0160100-01	Rice	nucleus	51.12	49.56
HORVU4Hr1G073290.3	Barley	mitochondrion, plastid	50.71	49.36
TraesCS4B01G276200.1	Wheat	mitochondrion, plastid	50.3	49.16
TraesCS4A01G029800.1	Wheat	mitochondrion, plastid	50.3	49.06
TraesCS1D01G136400.2	Wheat	cytosol, plastid	45.54	46.67
TraesCS1A01G131600.1	Wheat	cytosol	45.23	46.51
VIT_04s0008g01310.t01	Wine grape	cytosol, mitochondrion	42.9	46.28
TraesCS1B01G154400.1	Wheat	cytosol, plastid	45.13	46.21
HORVU1Hr1G035440.2	Barley	plastid	44.83	46.19
TraesCS4D01G274400.2	Wheat	mitochondrion	50.2	45.83
Os10t0430900-01	Rice	cytosol	45.03	45.68
KXG38479	Sorghum	cytosol, plastid	44.62	45.6
Bra031639.1-P	Field mustard	cytosol	52.94	45.16
CDY06328	Canola	cytosol	51.12	41.97
VIT_17s0000g02540.t01	Wine grape	cytosol	40.16	38.33
VIT_13s0074g00430.t01	Wine grape	cytosol	26.88	34.96
VIT_08s0007g03910.t01	Wine grape	cytosol	29.21	33.64
VIT_18s0001g07700.t01	Wine grape	cytosol	26.37	28.73
VIT_05s0077g00920.t01	Wine grape	cytosol	21.81	27.89
VIT_12s0028g02130.t01	Wine grape	cytosol	22.11	26.68
VIT_02s0025g04110.t01	Wine grape	cytosol	16.23	25.64
VIT_05s0051g00660.t01	Wine grape	cytosol	17.04	13.8
VIT_11s0052g01480.t01	Wine grape	cytosol	15.82	13.73
VIT_19s0085g00550.t01	Wine grape	cytosol	15.92	13.43
VIT_01s0011g01490.t01	Wine grape	cytosol	15.72	12.52
VIT_11s0016g04880.t01	Wine grape	mitochondrion	11.97	11.56
VIT_11s0118g00790.t01	Wine grape	cytosol	14.81	10.25

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100262285	wikigene:100262285	MapMan:18.4.1.30	Gene3D:3.30.200.20	ProteinID:CCB58117
ProteinID:CCB58117.1	UniProt:F6HTV6	EMBL:FN596249	GO:GO:0000166	GO:GO:0002229	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004709	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005768
GO:GO:0005769	GO:GO:0005783	GO:GO:0005794	GO:GO:0005802	GO:GO:0005829	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0008219	GO:GO:0009414	GO:GO:0009605	GO:GO:0009607	GO:GO:0009617
GO:GO:0009620	GO:GO:0009628	GO:GO:0009719	GO:GO:0009723	GO:GO:0009788	GO:GO:0009987
GO:GO:0012510	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
GO:GO:0046777	GO:GO:1900150	GO:GO:1900424	GO:GO:2000031	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100262285	wikigene:LOC100262285	PFAM:PF07714	PFAM:PF14381	PRINTS:PR00109	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44741	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC58586	UniParc:UPI00019849E5	ArrayExpress:VIT_14s0030g01440
EnsemblPlantsGene:VIT_14s0030g01440	EnsemblPlants:VIT_14s0030g01440.t01	unigene:Vvi.6390	RefSeq:XP_002271755	RefSeq:XP_002271755.2	SEG:seg

Description

No Description!

Coordinates

chr14:-:6026362..6048716

Molecular Weight (calculated)

109376.0 Da

IEP (calculated)

6.154

GRAVY (calculated)

-0.494

Length

986 amino acids

Sequence
(BLAST)

001: MKHIFKKLHI GSSSHDPNRS NETLSSATTS SPACASDHRT SSAQSSVSPP SSYPSPTTVS STAASTLPTA TSPAASNRSD YFLSEEEFQV QLALAISASN
101: SDFRDDSEKD QIRAATLLSL GRHRTDSVRD KDESAESMSR RYWDYNVLDY EEKVVDGFYD VYGLSTDPVI QGKMPSLTDL ETNLGNSGFE VIVVNRRIDP
201: ALEELVQVAH CIALDCPAAE VGVLVQRLAE IVTDHMGGPV RDANIMLVKW MESRKDLRTS LHTSILPVGS LSIGLSRHRA LLFKILADNV GVPCRLVKGS
301: HYTGVEDDAV NIIKLDNERE FLVDLMGAPG TLIPADILSA KDSSLKSYNP KLSKIPTLQA SKDPGGVYSR PKPLLGDYEG SSQTSTIENS LPQDRKASSE
401: KIESLDSFSS SSGDTGVGTS RISKRVTPVN QSDLRPSLAI GASVYKGSRG ANAVGDGSRM NVNIVPYNQN STEDPKNLFA DLNPFQMIGS SKASAQSKPM
501: ENKVDEFQRE KNSAAPGRPP LPLMWKNRYA NNEVPRKKEN DFVEGLFPKI NRETNDYNLP SLTSNNATTS EKVYSGVFKL SGNAYMNNKV NDDQNSSCNT
601: TSMLAPSTSQ FNRLSLDEDV NANYNEKYHK DGKVFQSDMV DAAKEHDKNE TGLHDHRKFR HDSFMENNLR EAESPCSSVD SDAGKVDQMF EDVGECEIPW
701: EDLVLGERIG LGSYGEVYHG DWNGTEVAVK KFLDQDFSGA ALAEFKREVR IMRRLRHPNV VLFMGAVTRP PNLSIITEFL PRGSLYRILH RPSCQIDEKR
801: RIKMALDVAK GMNCLHTSLP TIVHRDLKSP NLLVDKNWNV KVCDFGLSRL KHNTFLSSKS TAGTPEWMAP EVLRNENSNE KCDVYSFGII LWELATLRLP
901: WSGMNPMQVV GAVGFQNRRL DIPKEVDPLV ARIIWECWQT DPNLRPSFAQ LTVALKPLQR LVIPQHLDQQ SLTLQQEISD EVRLCD

Best Arabidopsis Sequence Match ( AT1G08720.1 )
(BLAST)

001: MKHIFKKLHR GGNQEQQNRT NDAAPPSDQN RIHVSANPPQ ATPSSVTETL PVAGATSSMA SPAPTAASNR ADYMSSEEEY QVQLALAISA SNSQSSEDPE
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ

Arabidopsis Description

EDR1Serine/threonine-protein kinase EDR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPR3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.