Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G245000.3 | |
| TraesCS1B01G256200.2 | |
| TraesCS1D01G244900.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G08720.1 | TraesCS1A01G245000.3 | AT5G13530.1 | 21343429 |
| AT1G08720.1 | TraesCS1B01G256200.2 | AT5G13530.1 | 21343429 |
| AT1G08720.1 | TraesCS1D01G244900.2 | AT5G13530.1 | 21343429 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G154400.1 | Wheat | cytosol, plastid | 97.18 | 96.78 |
| TraesCS1D01G136400.2 | Wheat | cytosol, plastid | 96.98 | 96.67 |
| HORVU1Hr1G035440.2 | Barley | plastid | 93.43 | 93.63 |
| Os10t0430900-01 | Rice | cytosol | 76.33 | 75.31 |
| KXG38479 | Sorghum | cytosol, plastid | 71.53 | 71.09 |
| TraesCS4A01G029800.1 | Wheat | mitochondrion, plastid | 54.85 | 52.03 |
| GSMUA_Achr1P14150_001 | Banana | cytosol, plastid | 45.05 | 51.74 |
| GSMUA_Achr2P08840_001 | Banana | cytosol, plastid | 46.19 | 49.22 |
| KRH34027 | Soybean | cytosol | 44.94 | 46.34 |
| VIT_14s0030g01440.t01 | Wine grape | cytosol, plastid | 46.51 | 45.23 |
| KRG92780 | Soybean | cytosol | 45.05 | 44.44 |
| CDY22667 | Canola | cytosol | 39.42 | 44.16 |
| AT1G08720.1 | Thale cress | cytosol | 41.19 | 42.34 |
| Solyc01g097980.2.1 | Tomato | cytosol, plastid | 41.4 | 40.43 |
| TraesCS6A01G186100.1 | Wheat | mitochondrion | 36.5 | 40.42 |
| TraesCS4A01G302000.1 | Wheat | plastid | 28.47 | 35.32 |
| Bra031639.1-P | Field mustard | cytosol | 39.42 | 32.7 |
| TraesCS2A01G426200.3 | Wheat | cytosol | 26.07 | 32.68 |
| TraesCS3A01G420200.2 | Wheat | cytosol | 19.5 | 32.19 |
| TraesCS7A01G190300.1 | Wheat | cytosol | 35.14 | 31.67 |
| CDY06328 | Canola | cytosol | 37.96 | 30.31 |
| TraesCS6A01G308500.1 | Wheat | cytosol | 34.83 | 30.04 |
| TraesCS5A01G085900.2 | Wheat | cytosol | 22.52 | 28.69 |
| TraesCS4A01G171500.1 | Wheat | cytosol | 22.42 | 28.67 |
| TraesCS6A01G321900.1 | Wheat | cytosol | 20.86 | 27.86 |
| TraesCS3A01G420300.2 | Wheat | cytosol | 20.65 | 27.77 |
| TraesCS5A01G396300.3 | Wheat | nucleus | 20.54 | 27.29 |
| TraesCS3A01G271100.1 | Wheat | cytosol | 21.27 | 25.63 |
| TraesCS6A01G190500.2 | Wheat | cytosol | 21.48 | 25.46 |
| TraesCS5A01G398200.1 | Wheat | cytosol | 13.45 | 16.91 |
| TraesCS6A01G344800.1 | Wheat | cytosol | 14.29 | 12.51 |
| TraesCS5A01G063200.1 | Wheat | cytosol | 14.7 | 12.51 |
| TraesCS7A01G511900.1 | Wheat | cytosol | 13.76 | 11.97 |
| TraesCS7A01G145100.1 | Wheat | cytosol | 14.6 | 11.01 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.30 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF07714 | PFAM:PF14381 | PRINTS:PR00109 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR44741 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS1A01G131600 | EnsemblPlants:TraesCS1A01G131600.1 | TIGR:cd13999 | SEG:seg |
Description
No Description!
Coordinates
chr1A:+:176449614..176461993
Molecular Weight (calculated)
106704.0 Da
IEP (calculated)
6.355
GRAVY (calculated)
-0.498
Length
959 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIPFVTKWS HRSSEPAGPS NSAAAQQQQQ QQAPSPPPPV ASTEAAGDEF ILQEEEYQMQ LALALSASAS GAEGAGDPDG EQIRKAKLMS LGKGHPVTNS
101: DRGGGDTPES LSRRYRDYNF LDYNEKVIDG FYDVFGLSAG SSGQGKIPSL AELQMSIGDL GYEVIVVDYK FDNALQEMKE VAECCLLGCP DITVLVRRIA
201: EVVADHMGGP VIDANEMITR WLSKSIEQRT SHQTSLLHIG SIEIGLSRHR ALLFKILADI VGIPCKLVKG SHYTGVEDDA INIIKMDDKR EFLVDVMAAP
301: GTLIPADVFN SKGTPFNFSQ TLGQNQVVES ASNIEDDPVA LQSEHKRNQG HMFANNNRIS VNLSSYENTM TAGSSASEPG TLDPRMQLGK TSTLPSAPSK
401: QKKNLQLITD SHETEESRKL FVELDPFNAI ESGKSSLAFK GLNNRNNEFQ RRRENVVPPS VRSQQPLVMK NWSACNDISN NKQYNVADGS VPRRNATDNA
501: SSSQLALSTA KHYNSNVREL NDRVYAAPAR NYDNKIVGTS AMAKALTGEC PDRSQVPPGL YYDKMLGTSS MNAASTSGIG KVAEKDPHND PGKGPIYSRF
601: DGELSKNAQG FTPERDEHKE NCGSHDHKML YPDPRKSPLD RFMDRPRQSI ECVFPSQVGS NKADMVLDEV SECEILWEDL VIDERIGIGS YGEVYHADWN
701: GTEVAVKKFL DQEFYGDALE EFRCEVRIMR RLRHPNIVLF MGAVTRPPHL SIVSEYLPRG SLYKIIHRPN CQIDEKRRIK MALDVARGMN CLHTSVPTIV
801: HRDLKSPNLL VDDNWTVKVC DFGLSRLKHS TFLSSKSTAG TPEWMAPEVL RNEQSNEKCD IYSFGVILWE LATLRKPWHG MNQMQVVGAV GFQDRRLDIP
901: KEVDPIVASI IRDCWQKDPN LRPSFIQLTS YLKTLQRLVI PSHQETASNH VPYEISLYR
101: DRGGGDTPES LSRRYRDYNF LDYNEKVIDG FYDVFGLSAG SSGQGKIPSL AELQMSIGDL GYEVIVVDYK FDNALQEMKE VAECCLLGCP DITVLVRRIA
201: EVVADHMGGP VIDANEMITR WLSKSIEQRT SHQTSLLHIG SIEIGLSRHR ALLFKILADI VGIPCKLVKG SHYTGVEDDA INIIKMDDKR EFLVDVMAAP
301: GTLIPADVFN SKGTPFNFSQ TLGQNQVVES ASNIEDDPVA LQSEHKRNQG HMFANNNRIS VNLSSYENTM TAGSSASEPG TLDPRMQLGK TSTLPSAPSK
401: QKKNLQLITD SHETEESRKL FVELDPFNAI ESGKSSLAFK GLNNRNNEFQ RRRENVVPPS VRSQQPLVMK NWSACNDISN NKQYNVADGS VPRRNATDNA
501: SSSQLALSTA KHYNSNVREL NDRVYAAPAR NYDNKIVGTS AMAKALTGEC PDRSQVPPGL YYDKMLGTSS MNAASTSGIG KVAEKDPHND PGKGPIYSRF
601: DGELSKNAQG FTPERDEHKE NCGSHDHKML YPDPRKSPLD RFMDRPRQSI ECVFPSQVGS NKADMVLDEV SECEILWEDL VIDERIGIGS YGEVYHADWN
701: GTEVAVKKFL DQEFYGDALE EFRCEVRIMR RLRHPNIVLF MGAVTRPPHL SIVSEYLPRG SLYKIIHRPN CQIDEKRRIK MALDVARGMN CLHTSVPTIV
801: HRDLKSPNLL VDDNWTVKVC DFGLSRLKHS TFLSSKSTAG TPEWMAPEVL RNEQSNEKCD IYSFGVILWE LATLRKPWHG MNQMQVVGAV GFQDRRLDIP
901: KEVDPIVASI IRDCWQKDPN LRPSFIQLTS YLKTLQRLVI PSHQETASNH VPYEISLYR
001: MKHIFKKLHR GGNQEQQNRT NDAAPPSDQN RIHVSANPPQ ATPSSVTETL PVAGATSSMA SPAPTAASNR ADYMSSEEEY QVQLALAISA SNSQSSEDPE
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ
Arabidopsis Description
EDR1Serine/threonine-protein kinase EDR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPR3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.