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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g096490.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G08720.1 Solyc01g096490.2.1 AT5G13530.1 21343429
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH34027 Soybean cytosol 58.35 61.61
VIT_14s0030g01440.t01 Wine grape cytosol, plastid 61.61 61.36
KRG92780 Soybean cytosol 57.84 58.44
GSMUA_Achr1P14150_001 Banana cytosol, plastid 47.45 55.81
CDY22667 Canola cytosol 48.37 55.49
GSMUA_Achr2P08840_001 Banana cytosol, plastid 49.49 54.0
AT1G08720.1 Thale cress cytosol 49.39 51.98
TraesCS4A01G029800.1 Wheat mitochondrion, plastid 46.95 45.6
Zm00001d027743_P002 Maize cytosol, plastid 46.44 45.51
TraesCS4B01G276200.1 Wheat mitochondrion, plastid 46.64 45.39
EER95467 Sorghum plastid 46.44 45.37
Os03t0160100-01 Rice nucleus 46.95 45.33
HORVU4Hr1G073290.3 Barley mitochondrion, plastid 46.64 45.21
Zm00001d048430_P002 Maize cytosol, plastid 45.52 44.92
TraesCS4D01G274400.2 Wheat mitochondrion 46.74 42.5
Os10t0430900-01 Rice cytosol 41.65 42.08
HORVU1Hr1G035440.2 Barley plastid 40.63 41.69
TraesCS1D01G136400.2 Wheat cytosol, plastid 40.73 41.58
TraesCS1B01G154400.1 Wheat cytosol, plastid 40.63 41.43
TraesCS1A01G131600.1 Wheat cytosol 40.43 41.4
Solyc08g065250.2.1 Tomato cytosol 31.36 41.29
Bra031639.1-P Field mustard cytosol 48.37 41.09
KXG38479 Sorghum cytosol, plastid 40.12 40.83
CDY06328 Canola cytosol 46.44 37.97
Solyc06g068980.2.1 Tomato nucleus 37.68 37.41
Solyc03g119140.2.1 Tomato extracellular 36.35 34.63
Solyc10g085570.1.1 Tomato cytosol 27.9 34.55
Solyc12g013980.1.1 Tomato cytosol 13.75 34.53
Solyc09g009090.2.1 Tomato cytosol 29.12 34.17
Solyc10g083610.1.1 Tomato cytosol 28.51 33.78
Solyc12g099250.1.1 Tomato cytosol 22.1 28.33
Solyc01g059860.2.1 Tomato cytosol 21.69 28.03
Solyc04g076480.2.1 Tomato cytosol 27.19 27.87
Solyc02g076780.2.1 Tomato cytosol 19.65 26.05
Solyc08g007910.2.1 Tomato nucleus 18.43 25.03
Solyc07g055130.2.1 Tomato cytosol 20.67 24.97
Solyc08g080460.1.1 Tomato plastid 18.43 23.94
Solyc12g013970.1.1 Tomato nucleus 6.52 17.63
Solyc07g006760.2.1 Tomato cytosol 13.95 12.65
Solyc09g091460.2.1 Tomato nucleus 15.17 12.06
Solyc07g007140.2.1 Tomato cytosol 14.97 10.39
Solyc02g031860.2.1 Tomato cytosol 12.32 9.91
Solyc02g031910.2.1 Tomato cytosol 12.53 9.9
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.30Gene3D:3.30.200.20GO:GO:0000166GO:GO:0002229GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004709GO:GO:0004871GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005768
GO:GO:0005769GO:GO:0005783GO:GO:0005794GO:GO:0005802GO:GO:0005829GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0008219GO:GO:0009414GO:GO:0009605GO:GO:0009607GO:GO:0009617
GO:GO:0009620GO:GO:0009628GO:GO:0009719GO:GO:0009723GO:GO:0009788GO:GO:0009987
GO:GO:0012510GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0035556
GO:GO:0046777GO:GO:1900150GO:GO:1900424GO:GO:2000031InterPro:IPR000719UniProt:K4B0I5
InterPro:Kinase-like_dom_sfPFAM:PF07714PFAM:PF14381PRINTS:PR00109ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR44741InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc01g097980.2EnsemblPlants:Solyc01g097980.2.1UniParc:UPI00027683E6SEG:seg
Description
Serine/threonine-protein kinase EDR1 [Source:Projected from Arabidopsis thaliana (AT1G08720) UniProtKB/Swiss-Prot;Acc:Q9FPR3]
Coordinates
chr1:+:88626253..88636752
Molecular Weight (calculated)
107341.0 Da
IEP (calculated)
6.449
GRAVY (calculated)
-0.461
Length
982 amino acids
Sequence
(BLAST)
001: MKHIFKKLHH SNRSNDAQST SSISSSSSPA SSLSSASCTT DHRNSNSVSQ SPLSPSTIST ASTTTTPAAP VGAGGGGGGG NLSTINRQQD YYTSEEEYQV
101: QLALALSVSS SQSQDPFPSD VNSSNGHGVG RTAVDLARDR EDAAADLLSR QYWDYGVMDY EEKVVDGFYD VYNLFTDPAS RGKMPSLSEL ETNPGTSNFE
201: GVIINQRIDP SLEELMQIAH CITLDCPASE ISLLVLRLSE LVTGHLGGPV KDANIILAKW MEISTELRTS LHTSVLPIGS LKIGLSRHRA LLFKVLADHV
301: GIPCRLVKGS HYTGVEDDAV NIVKLPNDSE FLVDLMGAPG TLIPADVLSA KDASFNSPKL NKIPSLPSNS HSGVSYPRRN LLSGQNSVLG DDFSGRSKPE
401: KIESVHSISD AGGSSTAGSS GINKRPSSNQ VDWTSPLAIG TSLYKGGRGP NAAGDGLRLN VNVVPYDQNN PEDPKNLFAD LNPFQIKGSG NTLLQKNPAR
501: NKVSELQQPI NTLIPGRPPA PMMWKNRYAP NEVPRKNESD SEGLFPKKNG GSSGYNISSI ASTSSNIPQK SSTDTSRLHG NSRPAYRGND EVASTRNNSS
601: ILSAELEFRR LSVQNSQNNN RETSQWEGHS LQSDDLNRTQ AYGDDIIVES DHTRNLQAQS IGTNIKLKEP ENPTSSGNLG PSQVDPVFDD VGDCEIPWED
701: LVIGERIGLG SYGEVYHADW NGTEVAVKKF LDQDFSGAAL AEFKREVRIM RRLRHPNVVR FMGAITRPPH LSIITEFLPR GSLYRIIHRP HFQIDERQRI
801: KMALDVAKGM DCLHTSNPTI VHRDLKSPNL LVDTDWNVKV CDFGLSRLKH NTFLSSKSTA GTPEWMAPEV LRNEPSNEKC DIYSFGVILW ELATLRLPWS
901: GMNPMQVVGA VGFQNKRLEI PKELDPIVAR IIWECWQTDP NLRPSFAQLT VALTPLQRLV IPAYVDQLNS RLPQEISVNS TP
Best Arabidopsis Sequence Match ( AT1G08720.1 )
(BLAST)
001: MKHIFKKLHR GGNQEQQNRT NDAAPPSDQN RIHVSANPPQ ATPSSVTETL PVAGATSSMA SPAPTAASNR ADYMSSEEEY QVQLALAISA SNSQSSEDPE
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ
Arabidopsis Description
EDR1Serine/threonine-protein kinase EDR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPR3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.