Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G245000.3 | |
| TraesCS1B01G256200.2 | |
| TraesCS1D01G244900.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G08720.1 | TraesCS1A01G245000.3 | AT5G13530.1 | 21343429 |
| AT1G08720.1 | TraesCS1B01G256200.2 | AT5G13530.1 | 21343429 |
| AT1G08720.1 | TraesCS1D01G244900.2 | AT5G13530.1 | 21343429 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G029800.1 | Wheat | mitochondrion, plastid | 98.22 | 98.02 |
| HORVU4Hr1G073290.3 | Barley | mitochondrion, plastid | 96.13 | 95.76 |
| TraesCS4D01G274400.2 | Wheat | mitochondrion | 98.22 | 91.76 |
| Os03t0160100-01 | Rice | nucleus | 81.27 | 80.63 |
| EER95467 | Sorghum | plastid | 77.4 | 77.71 |
| Zm00001d048430_P002 | Maize | cytosol, plastid | 76.31 | 77.39 |
| Zm00001d027743_P002 | Maize | cytosol, plastid | 76.41 | 76.95 |
| GSMUA_Achr1P14150_001 | Banana | cytosol, plastid | 47.97 | 57.96 |
| GSMUA_Achr2P08840_001 | Banana | cytosol, plastid | 50.84 | 57.0 |
| TraesCS1B01G154400.1 | Wheat | cytosol, plastid | 52.13 | 54.62 |
| TraesCS3B01G455600.1 | Wheat | cytosol | 14.27 | 51.99 |
| KRH34027 | Soybean | cytosol | 47.27 | 51.29 |
| VIT_14s0030g01440.t01 | Wine grape | cytosol, plastid | 49.16 | 50.3 |
| CDY22667 | Canola | cytosol | 42.02 | 49.53 |
| KRG92780 | Soybean | cytosol | 47.47 | 49.28 |
| Solyc01g097980.2.1 | Tomato | cytosol, plastid | 45.39 | 46.64 |
| AT1G08720.1 | Thale cress | cytosol | 42.72 | 46.2 |
| TraesCS6B01G215100.2 | Wheat | mitochondrion | 35.58 | 41.74 |
| Bra031639.1-P | Field mustard | cytosol | 41.63 | 36.33 |
| TraesCS4B01G012100.1 | Wheat | plastid | 26.66 | 34.84 |
| TraesCS2B01G446500.2 | Wheat | mitochondrion | 25.47 | 33.64 |
| TraesCS7B01G095300.2 | Wheat | cytosol, plastid | 35.38 | 33.62 |
| CDY06328 | Canola | cytosol | 39.94 | 33.56 |
| TraesCS6B01G337200.1 | Wheat | cytosol | 35.18 | 31.92 |
| TraesCS6B01G352700.1 | Wheat | cytosol | 19.33 | 27.62 |
| TraesCS4B01G127400.1 | Wheat | cytosol | 20.22 | 27.24 |
| TraesCS5B01G091700.1 | Wheat | cytosol | 20.22 | 27.09 |
| TraesCS3B01G304900.1 | Wheat | cytosol | 20.81 | 26.38 |
| TraesCS6B01G222400.1 | Wheat | cytosol | 20.12 | 25.63 |
| TraesCS5B01G401200.1 | Wheat | nucleus | 19.82 | 24.94 |
| TraesCS5B01G403300.1 | Wheat | cytosol | 13.08 | 17.14 |
| TraesCS5B01G069200.8 | Wheat | cytosol | 15.16 | 13.58 |
| TraesCS6B01G377500.2 | Wheat | cytosol | 14.17 | 13.41 |
| TraesCS7B01G003200.1 | Wheat | mitochondrion | 15.86 | 13.05 |
| TraesCS5B01G568400.1 | Wheat | mitochondrion | 15.86 | 13.04 |
| TraesCS7B01G423200.2 | Wheat | cytosol | 13.78 | 12.58 |
| TraesCS7B01G047300.2 | Wheat | cytosol | 15.36 | 12.02 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.30 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF07714 | PFAM:PF14381 | PRINTS:PR00109 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR44741 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS4B01G276200 | EnsemblPlants:TraesCS4B01G276200.1 | TIGR:cd13999 | SEG:seg |
Description
No Description!
Coordinates
chr4B:+:555925225..555933113
Molecular Weight (calculated)
110189.0 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.495
Length
1009 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKNLFKSKIK WQHRSNDPAS SSQPQSSATS PASSPSGTAP APALSSAAAT PTASAPVATT PMAGVGGGGG GAAGGDDYMY SEEEFQMQLA MALSASNSDC
0101: AGDRDRDQIR DAKLMSLGGG DRFAAGRDDG HTADSLSRRY WDYNCLDYHE KVVDGFYDIF DPSMESSRQG KMPSLEDLQT GIGDLGFEVI VINRAVDTAL
0201: QEMEQVAQCI LLDFPVANIT LLVQRIADLV TDNLGGPVKD ANAMLARWLE TSTQLRTSLH TSLLPIGCIK LGLSRHRALL FKILADSVGI PCKLVKGSNY
0301: TGDEDDAVNI IKVDKEREFL VDLMAAPGAL IPADVLSWKG SSSNSNHKLG QKSGLNQMAG SSSTIYPTLG ANALPLEHKG NQLPLLNSGD WISASQSGYE
0401: KEAAITHSQT SSSGTPSVTA ADVFDGSWTL VPHAQSDEPS TSAGTSSQHK VVPPGGEHPG TGNIKLSPGH QENTESNNLF AELNPFGRIE PKKASVPFNG
0501: PDNRNNELQR RRENVVPSTG RPQQRLVMKN WSPYNDVSNN KQYNYVQDSF ARRNVGDNVV SSPQVPRSAA NNINLNIGAR NDGSHAVSAH NNDSFMAGSS
0601: AMKMPSVAEI GKAAEMAMRG DLSKGPTGSR LEDQPPFGRH KWGDSTERRV PTNSVQNQAK ERETNFDGKQ DHKKLPPDPK KSPLDRFMDV SMPSRNSESV
0701: SPSSARSHRL DCVFDDVSEC EILWEDLVIG ERIGLGSYGE VYRADWNGTE VAVKKFLDQD FYGDALDEFR SEVRIMRRLR HPNIVLFMGA VTRPPNLSIV
0801: SEYLPRGSLY KILHRPGCQI DEKRRIKMAI DVAKGMNCLH TSVPTIVHRD LKSPNLLVDN NWNVKVCDFG LSRLKHSTFL SSKSTAGTPE WMAPEVLRNE
0901: QSNEKCDVYS FGVILWELAT LRMPWGGMNP MQVVGAVGFQ DRRLDIPKEI DPLVARIIWE CWQKDPNLRP SFAQLTTALK TVQRLVGPSP PETQSPPVPQ
1001: EIWVNSSTP
0101: AGDRDRDQIR DAKLMSLGGG DRFAAGRDDG HTADSLSRRY WDYNCLDYHE KVVDGFYDIF DPSMESSRQG KMPSLEDLQT GIGDLGFEVI VINRAVDTAL
0201: QEMEQVAQCI LLDFPVANIT LLVQRIADLV TDNLGGPVKD ANAMLARWLE TSTQLRTSLH TSLLPIGCIK LGLSRHRALL FKILADSVGI PCKLVKGSNY
0301: TGDEDDAVNI IKVDKEREFL VDLMAAPGAL IPADVLSWKG SSSNSNHKLG QKSGLNQMAG SSSTIYPTLG ANALPLEHKG NQLPLLNSGD WISASQSGYE
0401: KEAAITHSQT SSSGTPSVTA ADVFDGSWTL VPHAQSDEPS TSAGTSSQHK VVPPGGEHPG TGNIKLSPGH QENTESNNLF AELNPFGRIE PKKASVPFNG
0501: PDNRNNELQR RRENVVPSTG RPQQRLVMKN WSPYNDVSNN KQYNYVQDSF ARRNVGDNVV SSPQVPRSAA NNINLNIGAR NDGSHAVSAH NNDSFMAGSS
0601: AMKMPSVAEI GKAAEMAMRG DLSKGPTGSR LEDQPPFGRH KWGDSTERRV PTNSVQNQAK ERETNFDGKQ DHKKLPPDPK KSPLDRFMDV SMPSRNSESV
0701: SPSSARSHRL DCVFDDVSEC EILWEDLVIG ERIGLGSYGE VYRADWNGTE VAVKKFLDQD FYGDALDEFR SEVRIMRRLR HPNIVLFMGA VTRPPNLSIV
0801: SEYLPRGSLY KILHRPGCQI DEKRRIKMAI DVAKGMNCLH TSVPTIVHRD LKSPNLLVDN NWNVKVCDFG LSRLKHSTFL SSKSTAGTPE WMAPEVLRNE
0901: QSNEKCDVYS FGVILWELAT LRMPWGGMNP MQVVGAVGFQ DRRLDIPKEI DPLVARIIWE CWQKDPNLRP SFAQLTTALK TVQRLVGPSP PETQSPPVPQ
1001: EIWVNSSTP
001: MKHIFKKLHR GGNQEQQNRT NDAAPPSDQN RIHVSANPPQ ATPSSVTETL PVAGATSSMA SPAPTAASNR ADYMSSEEEY QVQLALAISA SNSQSSEDPE
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ
101: KHQIRAATLL SLGSHQRMDS RRDSSEVVAQ RLSRQYWEYG VLDYEEKVVD SFYDVYSLST DSAKQGEMPS LEDLESNHGT PGFEAVVVNR PIDSSLHELL
201: EIAECIALGC STTSVSVLVQ RLAELVTEHM GGSAEDSSIV LARWTEKSSE FKAALNTCVF PIGFVKIGIS RHRALLFKVL ADSVRLPCRL VKGSHYTGNE
301: DDAVNTIRLE DEREYLVDLM TDPGTLIPAD FASASNNTVE PCNSNGNKFP TAQFSNDVPK LSEGEGSSHS SMANYSSSLD RRTEAERTDS SYPKVGPLRN
401: IDYSSPSSVT SSTQLENNSS TAIGKGSRGA IIECSRTNMN IVPYNQNSEE DPKNLFADLN PFQNKGADKL YMPTKSGLNN VDDFHQQKNN PLVGRSPAPM
501: MWKNYSCNEA PKRKENSYIE NLLPKLHRDP RYGNTQSSYA TSSSNGAISS NVHGRDNVTF VSPVAVPSSF TSTENQFRPS IVEDMNRNTN NELDLQPHTA
601: AVVHGQQNDE SHIHDHRKYT SDDISTGCDP RLKDHESTSS SLDSTSYRND PQVLDDADVG ECEIPWNDLV IAERIGLGSY GEVYHADWHG TEVAVKKFLD
701: QDFSGAALAE FRSEVRIMRR LRHPNVVFFL GAVTRPPNLS IVTEFLPRGS LYRILHRPKS HIDERRRIKM ALDVAMGMNC LHTSTPTIVH RDLKTPNLLV
801: DNNWNVKVGD FGLSRLKHNT FLSSKSTAGT PEWMAPEVLR NEPSNEKCDV YSFGVILWEL ATLRLPWRGM NPMQVVGAVG FQNRRLEIPK ELDPVVGRII
901: LECWQTDPNL RPSFAQLTEV LKPLNRLVLP TPQ
Arabidopsis Description
EDR1Serine/threonine-protein kinase EDR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPR3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.