Factsheet for TraesCS4B01G127400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G156700.4	Wheat	cytosol	98.13	97.74
TraesCS4D01G143700.4	Wheat	cytosol	96.53	97.7
TraesCS4A01G171500.1	Wheat	cytosol	97.46	97.33
HORVU4Hr1G029350.6	Barley	cytosol	93.32	94.33
TraesCS3B01G455600.1	Wheat	cytosol	31.78	85.92
TraesCS6B01G352700.1	Wheat	cytosol	67.82	71.95
Bra001205.1-P	Field mustard	cytosol	27.77	69.8
EES08966	Sorghum	cytosol	64.09	67.8
CDY57621	Canola	cytosol	26.97	67.79
TraesCS5B01G401200.1	Wheat	nucleus	69.83	65.21
CDY57623	Canola	cytosol	26.7	64.72
TraesCS5B01G091700.1	Wheat	cytosol	59.55	59.23
GSMUA_Achr3P24310_001	Banana	cytosol	52.34	54.83
GSMUA_Achr5P27150_001	Banana	cytosol	52.07	54.17
GSMUA_Achr8P06350_001	Banana	cytosol	53.94	52.81
GSMUA_Achr11P...	Banana	cytosol	48.73	52.75
KRH36968	Soybean	nucleus	50.47	52.14
KRH50723	Soybean	nucleus	52.34	50.91
CDY49603	Canola	nucleus	48.87	50.83
Solyc01g059860.2.1	Tomato	cytosol	51.0	50.26
Solyc12g099250.1.1	Tomato	cytosol	51.4	50.26
KRH02358	Soybean	nucleus	51.67	50.19
VIT_05s0077g00920.t01	Wine grape	cytosol	51.54	50.06
PGSC0003DMT400011959	Potato	nucleus	51.27	50.0
CDY00031	Canola	cytosol	48.2	49.93
CDY34940	Canola	cytosol	48.2	48.98
CDY34937	Canola	cytosol	48.06	48.98
CDY05282	Canola	cytosol	47.13	48.89
CDY24677	Canola	cytosol	46.6	48.54
CDX74096	Canola	cytosol	40.45	48.33
AT3G06630.2	Thale cress	cytosol	44.86	48.14
AT1G67890.1	Thale cress	nucleus	48.2	47.19
AT3G06620.1	Thale cress	cytosol	48.6	47.09
PGSC0003DMT400061713	Potato	cytosol	51.27	47.06
Bra036141.1-P	Field mustard	cytosol	46.86	46.93
Bra029593.1-P	Field mustard	cytosol	47.13	46.63
Bra040281.1-P	Field mustard	cytosol	48.6	46.49
CDY70084	Canola	nucleus	35.78	46.05
AT3G06640.1	Thale cress	cytosol	44.19	45.34
CDY24676	Canola	cytosol	42.59	44.0
AT5G49470.2	Thale cress	nucleus	47.53	42.84
Bra040282.1-P	Field mustard	cytosol	41.39	42.23
Bra029594.1-P	Field mustard	cytosol	43.12	42.22
CDY05283	Canola	cytosol	42.19	41.42
TraesCS4B01G012100.1	Wheat	plastid	26.44	25.65
TraesCS2B01G446500.2	Wheat	mitochondrion	25.63	25.13
TraesCS6B01G215100.2	Wheat	mitochondrion	28.3	24.65
TraesCS1B01G154400.1	Wheat	cytosol, plastid	28.57	22.22
TraesCS4B01G276200.1	Wheat	mitochondrion, plastid	27.24	20.22
TraesCS7B01G095300.2	Wheat	cytosol, plastid	27.77	19.59
TraesCS6B01G222400.1	Wheat	cytosol	20.43	19.32
TraesCS6B01G337200.1	Wheat	cytosol	28.04	18.88
TraesCS3B01G304900.1	Wheat	cytosol	19.49	18.34
TraesCS5B01G403300.1	Wheat	cytosol	17.49	17.01
TraesCS6B01G377500.2	Wheat	cytosol	18.16	12.76
TraesCS5B01G069200.8	Wheat	cytosol	19.09	12.69
TraesCS7B01G423200.2	Wheat	cytosol	17.22	11.67
TraesCS5B01G568400.1	Wheat	mitochondrion	19.09	11.65
TraesCS7B01G003200.1	Wheat	mitochondrion	18.96	11.58
TraesCS7B01G047300.2	Wheat	cytosol	17.22	10.01

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	Gene3D:3.30.450.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000014	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:PAS	InterPro:PAS-like_dom_sf	InterPro:PAS_fold	PFAM:PF00989	PFAM:PF07714
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112	PANTHER:PTHR44676	PANTHER:PTHR44676:SF1
InterPro:Prot_kinase_dom	SMART:SM00091	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	EnsemblPlantsGene:TraesCS4B01G127400	EnsemblPlants:TraesCS4B01G127400.1	TIGR:cd00130	TIGR:cd13999
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:166759679..166766769

Molecular Weight (calculated)

83612.2 Da

IEP (calculated)

7.674

GRAVY (calculated)

-0.518

Length

749 amino acids

Sequence
(BLAST)

001: MEPDELLRKI RVLEEGQEEL KREIGKLIPG QGHSSTSPPP PPCRPFPALQ QATSSRGRAL ALLHQSSSSS SSSRPQRPGL SDRHCHRILQ SLGQAVHVIS
101: LEGKVLYWNR FAEHLYGYCS SEAIGQDLLE LICDPCDFSP AHEIIRNIFM GKCWRGKFPV KHKSGERFSV VVNNTPLYDE DGSLVGLTCL SGDARILEEI
201: VGPSVIGKSY PNSGKPHLQV NNKPKSVLPQ KCLSDSQQPL QSAITSKITN LCILFLISRM TTQATKVTSR VRSRIRSAQS CDEQDGNGRQ GQYSDHDARE
301: ELTSSEASTP GGDVLHGAFV TEEKSPVNSR KTNSDDSGQG KGGFQKIFSS KAEALLTKKG ISWPWKGNEN DGGCGKNNMT SPLLHDKQEN TQIRQGVPVL
401: EPIIIPDSKD TEYAKAGKYE VSGSWWTFNN NSTSSTMSST VSSNSSPIER VDYEADCLDY EILWEDLTLG EQVGEGSCGT VYHALWYGSD VAVKVFSRQE
501: YSEEMIRTFR QEVSLMKKLR HPNIILFMGA VASQERLCIV TEFLPRGSLF RLLRKTTAKL DPRRRVHMAI DIARGMNYLH SSSPTVVHRD LKSSNLLVDK
601: NWTVKVADFG LSRLKIETFL TTKTGKGTPQ WMAPEVLRNE PSNEKSDVYS YGVVLWELVT QKIPWDTLNT MQVIGAVGFM DHRLEIPSDI DPQWASMIES
701: CWDSDPQRRP SFQELLERLR ELQKKYALQV QMQRSAAGKG AEKMSVDDG

Best Arabidopsis Sequence Match ( AT1G67890.1 )
(BLAST)

001: MENPNPPAEK LLKKIRELEE SQEDLKREMS KLKVSAEIKR RSHSSSPKRP SRRNSGEGTP LWRKTGAASF RHASPLRKES HSKDGVAGGG DGPSAGKFTD
101: KQYLNILQSM AQAVHVFDLN GQIIFWNSMA EKLYGFSAAE ALGKDSINIL VDGQDAAVAK NIFQRCSSGE SWTGEFPVKN KMGERFSVVT TISPFYDDDG
201: LLIGIICITN DSALFQRPRV PPAKNRWQEG DSSFCRGTNG VASRLGFDSK EAVVSKLGLD SQQPIQAAIA SKISDLASKV GNKVRSKMRA GDNNASHPEG
301: GNGGSHQSDQ GFFDAAFSDQ REDAETNDAS TPRGNLIQSP FGVFLCNDDK SSSKASGESN DENDRNSVVP KKLTSKTEEW MVKKGLSWPW KGNEREGLER
401: RNAHSVWPWV HNEQQKEEAH HSNSYNSVKS ESLASESNKP ANNENMGSVN VNSASSASSC GSTSSSVMNK VDMDSDCLDY EILWEDLTIG EQIGQGSCGT
501: VYHGLWFGSD VAVKVFSKQE YSEEIITSFK QEVSLMKRLR HPNVLLFMGA VASPQRLCIV TEFLPRGSLF RLLQRNKSKL DLRRRIHMAS DIARGMNYLH
601: HCSPPIIHRD LKSSNLLVDR NWTVKVADFG LSRIKHETYL TTNGRGTPQW MAPEVLRNEA ADEKSDVYSF GVVLWELVTE KIPWENLNAM QVIGAVGFMN
701: QRLEVPKDVD PQWIALMESC WHSEPQCRPS FQELMDKLRE LQRKYTIQFQ AARAASIDNS SLKEK

Arabidopsis Description

PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4HVH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.