Factsheet for PGSC0003DMT400011959

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g099250.1.1	Tomato	cytosol	96.88	97.13
CDY57621	Canola	cytosol	28.26	72.82
Bra001205.1-P	Field mustard	cytosol	28.12	72.48
VIT_05s0077g00920.t01	Wine grape	cytosol	72.27	71.98
TraesCS3B01G455600.1	Wheat	cytosol	25.65	71.12
PGSC0003DMT400061713	Potato	cytosol	74.74	70.34
CDY57623	Canola	cytosol	27.6	68.61
KRH50723	Soybean	nucleus	67.97	67.79
KRH02358	Soybean	nucleus	67.97	67.7
CDY49603	Canola	nucleus	60.81	64.86
CDY00031	Canola	cytosol	60.68	64.45
KRH36968	Soybean	nucleus	60.55	64.14
CDY34937	Canola	cytosol	61.33	64.08
CDY34940	Canola	cytosol	61.46	64.04
AT1G67890.1	Thale cress	nucleus	63.67	63.92
GSMUA_Achr5P27150_001	Banana	cytosol	59.64	63.61
CDY24677	Canola	cytosol	59.11	63.14
GSMUA_Achr3P24310_001	Banana	cytosol	58.59	62.94
CDY05282	Canola	cytosol	58.59	62.33
GSMUA_Achr11P...	Banana	cytosol	55.86	61.99
AT3G06620.1	Thale cress	cytosol	61.98	61.58
Bra040281.1-P	Field mustard	cytosol	62.76	61.56
Bra036141.1-P	Field mustard	cytosol	59.9	61.5
Bra029593.1-P	Field mustard	cytosol	60.16	61.03
AT3G06630.2	Thale cress	cytosol	55.08	60.6
GSMUA_Achr8P06350_001	Banana	cytosol	59.9	60.13
EES16163	Sorghum	cytosol	58.59	59.52
TraesCS5B01G091700.1	Wheat	cytosol	57.55	58.7
TraesCS5D01G097900.1	Wheat	cytosol	57.29	58.43
TraesCS5A01G085900.2	Wheat	cytosol	57.29	58.43
HORVU5Hr1G022360.8	Barley	cytosol	57.55	58.31
CDY70084	Canola	nucleus	43.23	57.04
AT3G06640.1	Thale cress	cytosol	54.17	56.99
AT5G49470.2	Thale cress	nucleus	61.46	56.8
CDX74096	Canola	cytosol	46.22	56.62
Zm00001d030626_P003	Maize	cytosol	58.46	55.5
CDY24676	Canola	cytosol	52.08	55.17
Os12t0562500-00	Rice	cytosol, plasma membrane	32.42	54.49
HORVU6Hr1G078810.22	Barley	cytosol	45.57	54.26
EES08966	Sorghum	cytosol	49.61	53.81
TraesCS6B01G352700.1	Wheat	cytosol	49.22	53.54
Zm00001d041599_P004	Maize	cytosol, nucleus, plastid	57.16	53.54
Bra040282.1-P	Field mustard	cytosol	50.91	53.27
TraesCS6D01G301700.1	Wheat	cytosol	49.61	52.92
TraesCS3A01G420200.2	Wheat	cytosol	39.97	52.84
TraesCS6A01G321900.1	Wheat	cytosol	49.22	52.65
HORVU4Hr1G029350.6	Barley	cytosol	50.39	52.23
Os12t0562600-01	Rice	cytosol	5.08	52.0
TraesCS3D01G415800.1	Wheat	cytosol	42.71	51.9
TraesCS5A01G396300.3	Wheat	nucleus	48.7	51.8
TraesCS4D01G143700.4	Wheat	cytosol	49.87	51.76
TraesCS4A01G171500.1	Wheat	cytosol	50.52	51.73
TraesCS3A01G420300.2	Wheat	cytosol	47.79	51.47
HORVU5Hr1G096760.15	Barley	nucleus	47.92	51.4
TraesCS4B01G127400.1	Wheat	cytosol	50.0	51.27
CDY05283	Canola	cytosol	50.78	51.11
Bra029594.1-P	Field mustard	cytosol	50.91	51.11
HORVU3Hr1G093140.13	Barley	cytosol	42.06	51.11
TraesCSU01G156700.4	Wheat	cytosol	49.87	50.93
TraesCS3D01G415900.2	Wheat	cytosol	47.4	50.77
TraesCS5D01G405800.1	Wheat	mitochondrion	49.35	47.67
TraesCS5D01G405700.1	Wheat	nucleus	35.29	46.89
TraesCS5B01G401200.1	Wheat	nucleus	48.44	46.38
PGSC0003DMT400039618	Potato	cytosol	15.62	35.82
PGSC0003DMT400007850	Potato	nucleus	27.6	31.83
PGSC0003DMT400014794	Potato	cytosol	28.52	30.42
PGSC0003DMT400021612	Potato	cytosol	26.82	26.01
PGSC0003DMT400024156	Potato	cytosol	25.39	20.44
PGSC0003DMT400074057	Potato	cytosol, plastid	22.14	18.74
PGSC0003DMT400056866	Potato	cytosol	19.27	13.26
PGSC0003DMT400048262	Potato	cytosol	17.97	12.56
PGSC0003DMT400076173	Potato	nucleus	18.36	11.43
PGSC0003DMT400027083	Potato	cytosol	18.62	11.08

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102585267	MapMan:18.4.1.30	Gene3D:3.30.200.20	Gene3D:3.30.450.20	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000014
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1A0G1	InterPro:PAC	InterPro:PAS	InterPro:PAS-like_dom_sf
InterPro:PAS_fold	PFAM:PF00989	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400004695	PGSC:PGSC0003DMG400004695	EnsemblPlants:PGSC0003DMT400011959
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50112	PANTHER:PTHR44676	PANTHER:PTHR44676:SF2
InterPro:Prot_kinase_dom	SMART:SM00086	SMART:SM00091	SMART:SM00220	SUPFAM:SSF55785	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR00229	UniParc:UPI000294B425	RefSeq:XP_006349841.1	SEG:seg

Description

Map3k delta-1 protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400004695]

Coordinates

chr12:-:59981532..59988598

Molecular Weight (calculated)

85294.3 Da

IEP (calculated)

6.864

GRAVY (calculated)

-0.554

Length

768 amino acids

Sequence
(BLAST)

001: MDSTKAASAS AAQGPTPPAE ELLKKIQELE AGHAQMKHEM SKLMMCDDHR TQRQRAHSIS PQRPPRIRAG GGFDGGSAAV WKRGSISFRH SSPLQRESSS
101: KGEGDGSSIG GGGPAAVKFT DRQYLNILQS MGQAVHILDL NGQIIYWNRT AEKLYGYSAA EALGNDLIEL LTDARDHDAA NNIVQRVIRG ESWTGQFPIK
201: NKQGERFLVV ATDTPFYDDD GTLLGVICIS SDMRPFQESG LMSMGVKQLE ADTRFRARTL TSSKLGLDPQ QPLQAAIASK ISNFASKVSN KVKSKIKTGE
301: SSMFREGGSG DSHYSDHAFS DAALSDHRED ANSSGASTPR GDVLPSPFGV FSNLVKVEHS GDESEGKQGI SKIITSKAEA WMAKNSLSWP WKGNEREASE
401: SRTTRSVWPW LNNDQDNELN HINSSNTVKP ENQVTETYRT TTNEAPGSWS SFNINSTSSV SSYGSTSSSA VNKVDMDTDC LDYEILWEDL TIGEQIGEGS
501: CGTVYHGLWY GSDVAVKVFT KQEYSEELIY SFKQEISLMK RLRHPNILLF MGAVTSPQRL CIVTEFLPRG SLFRLLQRNA SKLEWRRRIH MALDVARGMN
601: YLHHLTPPIV HRDLKSSNLL VDKNWTVKVG DFGLSRLKHE TYLATRTGKG TPQWMAPEVL RNEPSDEKSD VYSFGVILWE LATEKIPWDN LNTMQVIGAV
701: GFMNQRLDIP KDVHPQLASI IESCWLSEPQ SRPSFQELME KLKDLQRQYV IQAQAARSTA GDSSQKEQ

Best Arabidopsis Sequence Match ( AT5G49470.3 )
(BLAST)

001: MEKTTPPAEE LLKKIRELEE SQEHLKREMS RLKVSAEMKQ RSHSASPQRP VRRNSNDGTP MWRKTGAASF RHASPLRKES HAKVAGGGGE GQSAGKFTDK
101: QYLNILQSMA QAVHVFDLNG QIIFWNSMAE KLYGFSASEA LGKDPIDILV DVQDASVAQN ITRRCSSGES WTGEFPVKNK AGERFSVVTT MSPSYDDDGC
201: LIGIICITND SALFQDPRGS PAKTRRGQEG ETSFSRVTSS VASKLGLDSK EAVVSKLGLD SQQPIQVAIA SKISDLASKV GNKVKSKMRA GDNNAANLEG
301: GSGDSHQSDQ GFFDAAFADR REDAATSGAD TPRGDFIQSP FGVFLRSDEK ASTKPFRDSS DESDGNSVVP KTLTSKAEEW MVKKGLSWPW KGNEREGLEG
401: RRSHSVWPWV RNEQQKQQAY QSNSNHSVKS ESQACESIKA SSNEPMGYWS SSVNVNSTSS SSSCGSTSSS VMNKVDMDSD CLDYEILWED LTIGEQIGQG
501: SCGTVYHGLW FGSDVAVKVF SKQEYSEEII TSFRQEVSLM KRLRHPNVLL FMGAVTSPQR LCIVTEFLPR GSLFRLLQRN TSKLDWRRRI HMASDIARGM
601: NYLHHCTPPI IHRDLKSSNL LVDKNWTVKV ADFGLSRIKH ETYLTTKTGR GTPQWMAPEV LRNEAADEKS DVYSFGVILW ELVTEKIPWE SLNAMQVIGA
701: VGFMNQRLEV PKNVDPQWIS LMESCWHSEP QDRPSFQEIM EKLRELQRKY TIQFQAARAA SIENSALKEK

Arabidopsis Description

PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4K645]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.