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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400011818
PGSC0003DMT400020285
PGSC0003DMT400041983
PGSC0003DMT400044244
PGSC0003DMT400071109
PGSC0003DMT400081399

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G03730.1 PGSC0003DMT400020285 AT1G66340.1 12837948
AT5G03730.1 PGSC0003DMT400071109 AT1G66340.1 12837948
AT5G03730.1 PGSC0003DMT400020285 AT1G66340.1 8417317
AT5G03730.1 PGSC0003DMT400071109 AT1G66340.1 8417317
AT5G03730.1 PGSC0003DMT400020285 AT1G66340.1 9560288
AT5G03730.1 PGSC0003DMT400071109 AT1G66340.1 9560288
AT5G03730.1 PGSC0003DMT400081399 AT2G40940.1 9560288
AT5G03730.1 PGSC0003DMT400011818 AT2G47430.1 9560288
AT5G03730.1 PGSC0003DMT400041983 AT3G23150.1 12177468
AT5G03730.1 PGSC0003DMT400044244 AT3G23150.1 12177468
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g085570.1.1 Tomato cytosol 94.32 94.2
CDY10360 Canola cytosol 62.12 67.12
CDX70289 Canola cytosol 61.99 65.73
VIT_08s0007g03910.t01 Wine grape cytosol 70.58 65.3
CDX80884 Canola cytosol 64.39 64.23
CDY11267 Canola cytosol 64.02 63.69
Bra005778.1-P Field mustard cytosol 63.76 63.52
KRH67846 Soybean cytosol 64.77 63.33
KRG96132 Soybean cytosol 64.52 63.24
Bra009514.1-P Field mustard plastid 59.85 62.2
AT5G03730.1 Thale cress cytosol 64.39 62.12
KRH20027 Soybean cytosol 65.4 61.96
KRH32650 Soybean cytosol 65.28 61.84
VIT_13s0074g00430.t01 Wine grape cytosol 55.81 58.31
Os09t0566550-01 Rice cytosol, plastid 55.05 58.06
OQU89015 Sorghum cytosol 55.18 57.2
GSMUA_Achr8P07600_001 Banana cytosol 60.1 56.87
Zm00001d005348_P001 Maize cytosol 55.05 56.7
TraesCS4D01G010200.1 Wheat plastid 54.55 56.1
TraesCS4B01G012100.1 Wheat plastid 54.67 56.09
HORVU4Hr1G001850.1 Barley plastid 54.55 55.89
TraesCS4A01G302000.1 Wheat plastid 54.55 55.89
KRH71740 Soybean cytosol 46.34 55.61
Os02t0527600-01 Rice cytosol 54.17 54.93
GSMUA_Achr11P... Banana cytosol, plastid 52.65 53.74
KXG30326 Sorghum cytosol, plastid 53.54 52.74
GSMUA_Achr11P... Banana cytosol 53.28 52.68
Zm00001d016675_P001 Maize cytosol, plastid 52.9 52.38
KRH33179 Soybean cytosol 24.12 50.13
PGSC0003DMT400039618 Potato cytosol 17.05 40.3
PGSC0003DMT400024156 Potato cytosol 41.67 34.59
PGSC0003DMT400011959 Potato nucleus 26.01 26.82
PGSC0003DMT400014794 Potato cytosol 24.24 26.67
PGSC0003DMT400007850 Potato nucleus 22.22 26.43
PGSC0003DMT400074057 Potato cytosol, plastid 29.8 26.02
PGSC0003DMT400061713 Potato cytosol 25.51 24.75
PGSC0003DMT400056866 Potato cytosol 18.31 12.99
PGSC0003DMT400048262 Potato cytosol 16.92 12.19
PGSC0003DMT400076173 Potato nucleus 18.81 12.07
PGSC0003DMT400027083 Potato cytosol 19.07 11.7
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
EntrezGene:102594268MapMan:11.5.2.2MapMan:18.4.1.30Gene3D:3.30.200.20InterPro:CTR1GO:GO:0000166
GO:GO:0001666GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0006464GO:GO:0006468GO:GO:0006629GO:GO:0006950GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009628GO:GO:0009686GO:GO:0009719
GO:GO:0009723GO:GO:0009744GO:GO:0009750GO:GO:0009791GO:GO:0009987GO:GO:0016020
GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0046777GO:GO:0048510GO:GO:0071281
GO:GO:2000035GO:GO:2000069InterPro:IPR000719InterPro:Kinase-like_dom_sfUniProt:M1AFF1PFAM:PF07714
PFAM:PF14381EnsemblPlantsGene:PGSC0003DMG400008384PGSC:PGSC0003DMG400008384EnsemblPlants:PGSC0003DMT400021612PRINTS:PR00109ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR44329PANTHER:PTHR44329:SF1InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI000294D25FRefSeq:XP_006338940.1
RefSeq:XP_006338941.1RefSeq:XP_006338942.1SEG:seg:::
Description
CTR1 kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400008384]
Coordinates
chr10:-:53333706..53352295
Molecular Weight (calculated)
88229.2 Da
IEP (calculated)
5.821
GRAVY (calculated)
-0.274
Length
792 amino acids
Sequence
(BLAST)
001: MEVPGRRSNY AMLQQQPPYD EFNSDEKSNS RSDKGLYWDL IDRRIGTTPF QASIVLPTQS SEGSFAESSI SGVSFGHMNA NSGGGGSLSK SWAQQTEESY
101: QLQLTLALRI STEATCADDP NLLDYVPDES VSHASASSAS VEAMSHRFWV NGSLSYFDKV PDGFYLIQGM DPYIWTLCSD LQESGRIPSI ESLKAVDPSV
201: VPSVEVILID RRSDPRLKEL QNQIHSMYRS CNTTKEVVDQ LAKLICNHMG GAASVGEGDF IPIWKECCND LKNCIGSIVF PIGSLSVGLC GHRALLFKVL
301: ADIIDLPCRI ARGCKYCKRS DAFSCLVRFG LDREYLVDLI RDPGCLSEPN SLLNGPSSIS ISSPLRLPRF GQVEPAMDFT SLAKQYFSDC LSLNLVFDDS
401: SAGTAVDGDA GQTDRSSMDR SSAVLSSNNR DEVSRLPLPP INAWNKGCDK GSQLPALYYP PNTSTSMRQE EDLIHLKNVP PIRYGDAQLI AISEARTDTI
501: NDQRYFEGGR LAPAKPSREL VLDVEDLVIP WNDLVLKERI GAGSFGTVHR ADWNGSDVAV KILMEQDFHA ERYKEFLQEV SIMKRLRHPN IVLFMGAVTE
601: PPNLSIVTEY LSRGSLYRLL HKPGAREVLD ERRRLCMAYD VAKGMNYLHK RKPPVVHRDL KSPNLLVDKK YTVKVCDFGL SRLKANTFLS SKSAAGTPEW
701: MAPEVLRDEL SNEKSDIYSF GVILWELATL QQPWSNLNPP QVVAAVGFKG MRLEIPRDLN HPVTTIIEAC WVNEPWKRPS FSTIMDMLRP LI
Best Arabidopsis Sequence Match ( AT5G03730.2 )
(BLAST)
001: MEMPGRRSNY TLLSQFSDDQ VSVSVTGAPP PHYDSLSSEN RSNHNSGNTG KAKAERGGFD WDPSGGGGGD HRLNNQPNRV GNNMYASSLG LQRQSSGSSF
101: GESSLSGDYY MPTLSAAANE IESVGFPQDD GFRLGFGGGG GDLRIQMAAD SAGGSSSGKS WAQQTEESYQ LQLALALRLS SEATCADDPN FLDPVPDESA
201: LRTSPSSAET VSHRFWVNGC LSYYDKVPDG FYMMNGLDPY IWTLCIDLHE SGRIPSIESL RAVDSGVDSS LEAIIVDRRS DPAFKELHNR VHDISCSCIT
301: TKEVVDQLAK LICNRMGGPV IMGEDELVPM WKECIDGLKE IFKVVVPIGS LSVGLCRHRA LLFKVLADII DLPCRIAKGC KYCNRDDAAS CLVRFGLDRE
401: YLVDLVGKPG HLWEPDSLLN GPSSISISSP LRFPRPKPVE PAVDFRLLAK QYFSDSQSLN LVFDPASDDM GFSMFHRQYD NPGGENDALA ENGGGSLPPS
501: ANMPPQNMMR ASNQIEAAPM NAPPISQPVP NRANRELGLD GDDMDIPWCD LNIKEKIGAG SFGTVHRAEW HGSDVAVKIL MEQDFHAERV NEFLREVAIM
601: KRLRHPNIVL FMGAVTQPPN LSIVTEYLSR GSLYRLLHKS GAREQLDERR RLSMAYDVAK GMNYLHNRNP PIVHRDLKSP NLLVDKKYTV KVCDFGLSRL
701: KASTFLSSKS AAGTPEWMAP EVLRDEPSNE KSDVYSFGVI LWELATLQQP WGNLNPAQVV AAVGFKCKRL EIPRNLNPQV AAIIEGCWTN EPWKRPSFAT
801: IMDLLRPLIK SAVPPPNRSD L
Arabidopsis Description
CTR1Serine/threonine-protein kinase CTR1 [Source:UniProtKB/Swiss-Prot;Acc:Q05609]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.