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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • cytosol 1
  • endoplasmic reticulum 3
  • extracellular 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400020285
PGSC0003DMT400021612
PGSC0003DMT400041983
PGSC0003DMT400044244
PGSC0003DMT400051833
PGSC0003DMT400055484
PGSC0003DMT400060160
PGSC0003DMT400071109
PGSC0003DMT400073847
PGSC0003DMT400081399
PGSC0003DMT400081747

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G66340.1 PGSC0003DMT400041983 AT1G04310.1 18577522
AT1G66340.1 PGSC0003DMT400044244 AT1G04310.1 18577522
AT1G66340.1 PGSC0003DMT400020285 AT1G66340.1 18384742
AT1G66340.1 PGSC0003DMT400071109 AT1G66340.1 18384742
AT1G66340.1 PGSC0003DMT400020285 AT1G66340.1 18577522
AT1G66340.1 PGSC0003DMT400071109 AT1G66340.1 18577522
AT1G66340.1 PGSC0003DMT400081399 AT2G40940.1 18577522
AT1G66340.1 PGSC0003DMT400060160 AT3G04580.1 18577522
AT1G66340.1 PGSC0003DMT400073847 AT3G04580.1 18577522
AT1G66340.1 PGSC0003DMT400081747 AT3G21510.1 10930573
AT1G66340.1 PGSC0003DMT400081747 AT3G21510.1 18384742
AT1G66340.1 PGSC0003DMT400041983 AT3G23150.1 18577522
AT1G66340.1 PGSC0003DMT400044244 AT3G23150.1 18577522
AT1G66340.1 PGSC0003DMT400051833 AT3G29350.1 10930573
AT1G66340.1 PGSC0003DMT400055484 AT5G03280.1 19769567
AT1G66340.1 PGSC0003DMT400021612 AT5G03730.1 12837948
AT1G66340.1 PGSC0003DMT400021612 AT5G03730.1 8417317
AT1G66340.1 PGSC0003DMT400021612 AT5G03730.1 9560288
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g056580.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 96.06 96.06
PGSC0003DMT400020285 Potato endoplasmic reticulum, plasma membrane, plastid 86.28 84.22
VIT_19s0093g00580.t01 Wine grape cytosol 81.39 80.84
KRH27542 Soybean cytosol 80.98 80.65
KRH36433 Soybean cytosol 80.71 80.27
CDY07498 Canola cytosol 79.62 79.62
CDY49633 Canola cytosol 79.48 79.59
Bra004160.1-P Field mustard cytosol 79.48 79.48
AT1G66340.1 Thale cress plasma membrane 79.62 79.4
PGSC0003DMT400081399 Potato cytosol, plasma membrane, vacuole 57.74 66.93
CDY49629 Canola cytosol 10.73 56.83
CDY66567 Canola cytosol 10.87 54.79
PGSC0003DMT400041983 Potato plasma membrane 38.32 37.06
PGSC0003DMT400073847 Potato plasma membrane 37.91 36.38
PGSC0003DMT400060160 Potato endoplasmic reticulum 36.14 34.86
PGSC0003DMT400044244 Potato plasma membrane 34.92 34.13
PGSC0003DMT400084727 Potato cytosol, golgi, plasma membrane 13.18 18.03
PGSC0003DMT400075775 Potato endoplasmic reticulum, golgi, plasma membrane 22.01 16.33
PGSC0003DMT400015729 Potato cytosol 7.74 15.49
PGSC0003DMT400075949 Potato cytosol 20.65 14.99
PGSC0003DMT400011818 Potato extracellular, golgi, peroxisome 13.72 13.19
PGSC0003DMT400009219 Potato plastid 19.02 11.56
Protein Annotations
Gene3D:1.10.287.130EntrezGene:102602052MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300
InterPro:CheY-like_superfamilyncoils:CoilInterPro:ETRInterPro:GAFInterPro:GAF-like_dom_sfGO:GO:0000155
GO:GO:0000160GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004673GO:GO:0004871
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0006464GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009873GO:GO:0009987GO:GO:0010105
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0016772
GO:GO:0018106GO:GO:0019538GO:GO:0023014GO:GO:0038023GO:GO:0038199GO:GO:0046872
GO:GO:0050896GO:GO:0051740InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:HisK_dim/P_sf
InterPro:His_kinase_domInterPro:IPR001789InterPro:IPR005467InterPro:IPR029016InterPro:IPR036890UniProt:M1CN74
PFAM:PF00072PFAM:PF00512PFAM:PF01590PFAM:PF02518EnsemblPlantsGene:PGSC0003DMG400027651PGSC:PGSC0003DMG400027651
EnsemblPlants:PGSC0003DMT400071109PIRSF:PIRSF026389PRINTS:PR00344PFscan:PS50109PFscan:PS50110PANTHER:PTHR24423
PANTHER:PTHR24423:SF598SMART:SM00065SMART:SM00387SMART:SM00388SMART:SM00448SUPFAM:SSF47384
SUPFAM:SSF52172SUPFAM:SSF55781SUPFAM:SSF55874InterPro:Sig_transdc_His_kin-like_CInterPro:Sig_transdc_resp-reg_receiverTMHMM:TMhelix
UniParc:UPI000296FA32RefSeq:XP_006348376.1SEG:seg:::
Description
Ethylene receptor 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400027651]
Coordinates
chr7:+:51816086..51822785
Molecular Weight (calculated)
81829.5 Da
IEP (calculated)
7.079
GRAVY (calculated)
0.161
Length
736 amino acids
Sequence
(BLAST)
001: MDCNCFDPLL PADELLMKYQ YISDFFIAIA YFSIPIELVY FVQKSAVFPY RWVLVQFGAF IVLCGATHLI NLWTSTPHTR TVAMVMTTAK FSTAAVSCAT
101: AVMLVHIIPD LLSVKTRELF LKNKAAELDR EMGLIRTQEE TGRYVRMLTH EIRSTLDRHT ILKTTLVELG RALQLEECAL WMPTRTGVEL QLSYTLHHQN
201: PVGFTVPIQL PVINQVFSAN RAVKISPNSP VARLRPARKY MPGEVVAVRV PLLHLSNFQT NDLPELSPKS YALMVLMLPS NSARQWHVHE LELVDVVADQ
301: VAVALSHAAI LEESMRARDL LMEQNVALDL ARREAETAVR ARNDFLGVMN HEMRTPMHAV IALSSLLQES ELTPEQRLMV ETILKSSNLL ATLINDVLDL
401: SRLEDGSLQL DVGTFNLHAL FREVLNLIKP IAAVKKLFVT LSLSSDLPEV AIGDEKRLMQ ILLNVVGNAV KFSKEGSVSV AAVAAKSESL IDPRAPEFFP
501: VQSENHFYLR VQVKDTGSGI NPQDIPKLFC KFAQNQELAT KNSGGTGLGL AICKRFVNLM EGHIWIESEG VGKGSTAIFI VKLGIPGRLN ESKLPFIPGL
601: PANHMQMTFQ GLKVLVMDDN GFSRMVTKTL LVHLGCDVTT IGSGDECLRV LTREHKVVIM DVSITGMNCY DVAVSVHEKF GKRYERPLIV ALTGNTDQVT
701: KENCMRVGMD GVILKPVSID KMTSVLSELL EHRAVL
Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)
001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM
Arabidopsis Description
ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.