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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 6
  • vacuole 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400020285
PGSC0003DMT400071109

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G04580.1 PGSC0003DMT400020285 AT1G66340.1 18577522
AT3G04580.1 PGSC0003DMT400071109 AT1G66340.1 18577522
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g006180.1.1 Tomato plasma membrane 98.31 98.31
PGSC0003DMT400060160 Potato endoplasmic reticulum 80.18 80.6
VIT_14s0081g00630.t01 Wine grape plasma membrane 70.66 71.32
KRG92613 Soybean plasma membrane 64.93 65.01
KRH34165 Soybean plasma membrane 64.8 64.8
KRH68803 Soybean plasma membrane 64.41 64.32
KRG97057 Soybean plasma membrane 60.1 63.06
CDY30004 Canola plasma membrane 62.06 62.14
Bra040134.1-P Field mustard plasma membrane 61.8 61.88
AT3G04580.1 Thale cress plasma membrane 61.02 61.1
PGSC0003DMT400041983 Potato plasma membrane 58.28 58.74
KRG98373 Soybean extracellular 13.3 58.29
GSMUA_Achr11P... Banana plasma membrane 57.24 57.92
GSMUA_Achr8P14350_001 Banana endoplasmic reticulum 55.54 56.27
CDY64702 Canola mitochondrion 9.52 55.73
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, plasma membrane 45.76 53.83
TraesCS2B01G023800.1 Wheat plasma membrane 53.06 52.93
TraesCS2D01G000500.1 Wheat plasma membrane 53.45 52.84
CDY21123 Canola cytosol 20.6 52.67
TraesCS2A01G000200.1 Wheat plasma membrane 53.32 52.57
Os04t0169100-02 Rice plasma membrane 52.28 52.56
HORVU0Hr1G001750.2 Barley endoplasmic reticulum 52.8 52.12
HORVU2Hr1G000030.1 Barley plasma membrane 52.28 51.74
EES10426 Sorghum plasma membrane 51.76 51.36
PGSC0003DMT400044244 Potato plasma membrane 49.8 50.73
Zm00001d004372_P003 Maize plasma membrane 50.33 50.13
OQU85974 Sorghum plasma membrane 50.2 49.61
TraesCS6B01G439600.1 Wheat mitochondrion 50.46 49.36
TraesCS6D01G383600.1 Wheat mitochondrion 50.2 49.11
Zm00001d051889_P002 Maize endoplasmic reticulum 48.24 49.07
Zm00001d025050_P001 Maize cytosol, golgi, plasma membrane 51.11 48.76
TraesCS6A01G399400.2 Wheat mitochondrion, plasma membrane 50.2 47.59
HORVU6Hr1G091700.6 Barley cytosol, mitochondrion, plasma membrane 50.2 46.84
HORVU6Hr1G080170.1 Barley plasma membrane 11.47 46.81
Os02t0820900-03 Rice mitochondrion 50.07 45.93
TraesCS6D01G266200.1 Wheat plasma membrane 39.5 41.74
TraesCS6A01G285800.1 Wheat plasma membrane 39.37 41.48
TraesCS6B01G360200.1 Wheat cytosol, endoplasmic reticulum, golgi 39.24 41.35
TraesCS6B01G314600.1 Wheat plasma membrane 39.24 41.29
TraesCS6A01G329400.1 Wheat plasma membrane 39.24 41.23
TraesCS6D01G308300.1 Wheat plasma membrane 38.72 40.8
HORVU6Hr1G071860.2 Barley plasma membrane 38.33 40.72
HORVU6Hr1G080180.1 Barley cytosol 25.68 39.16
Os07t0259100-01 Rice mitochondrion, plasma membrane 39.11 38.61
PGSC0003DMT400071109 Potato cytosol, endoplasmic reticulum, plasma membrane 36.38 37.91
PGSC0003DMT400020285 Potato endoplasmic reticulum, plasma membrane, plastid 37.03 37.67
PGSC0003DMT400081399 Potato cytosol, plasma membrane, vacuole 29.99 36.22
Zm00001d053594_P001 Maize plasma membrane 37.68 35.99
EES06508 Sorghum mitochondrion, plasma membrane 38.2 35.43
KXG36402 Sorghum plasma membrane 37.68 33.8
Zm00001d021687_P001 Maize plasma membrane 36.25 32.51
PGSC0003DMT400015729 Potato cytosol 7.69 16.03
PGSC0003DMT400075775 Potato endoplasmic reticulum, golgi, plasma membrane 19.17 14.82
PGSC0003DMT400084727 Potato cytosol, golgi, plasma membrane 10.17 14.5
PGSC0003DMT400075949 Potato cytosol 15.91 12.03
PGSC0003DMT400009219 Potato plastid 16.56 10.49
PGSC0003DMT400011818 Potato extracellular, golgi, peroxisome 9.39 9.4
Protein Annotations
Gene3D:1.10.287.130EntrezGene:102602170MapMan:11.5.2.1Gene3D:3.30.450.40Gene3D:3.30.565.10Gene3D:3.40.50.2300
InterPro:CheY-like_superfamilyncoils:CoilInterPro:ETRInterPro:GAFInterPro:GAF-like_dom_sfGO:GO:0000155
GO:GO:0000160GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004673GO:GO:0004871
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0006464GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009873GO:GO:0009987GO:GO:0010105
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0018106
GO:GO:0019538GO:GO:0023014GO:GO:0038023GO:GO:0038199GO:GO:0046872GO:GO:0050896
GO:GO:0051740InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HisK_dim/PInterPro:HisK_dim/P_sfInterPro:His_kinase_dom
InterPro:IPR001789InterPro:IPR005467InterPro:IPR029016InterPro:IPR036890UniProt:M1CSS3PFAM:PF00072
PFAM:PF01590PFAM:PF02518EnsemblPlantsGene:PGSC0003DMG400028694PGSC:PGSC0003DMG400028694EnsemblPlants:PGSC0003DMT400073847PIRSF:PIRSF026389
PFscan:PS50109PFscan:PS50110PANTHER:PTHR43719PANTHER:PTHR43719:SF6SMART:SM00065SMART:SM00388
SMART:SM00448SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55781SUPFAM:SSF55874InterPro:Sig_transdc_resp-reg_receiver
SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000295E6F9RefSeq:XP_006350949.1RefSeq:XP_006350950.1SEG:seg
Description
Ethylene receptor homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400028694]
Coordinates
chr11:+:6479282..6486765
Molecular Weight (calculated)
85756.0 Da
IEP (calculated)
7.515
GRAVY (calculated)
0.063
Length
767 amino acids
Sequence
(BLAST)
001: MLAMLRLLCL GLLISLIIVS VSANDGEFFN CCDEDGFWSI HTILDCQKVS DFFIAVAYFS IPLELLYFIS RSNLPFKWVL VQFIAFIVLC GLTHLLNGWT
101: YNPHPSFQLI LSLTVAKILT ALVSCATAIT LLTLIPLLLK IKVRELFLTQ NVLELDQEVG MMKKQTEASM HVRMLTHEIR KSLDKHTILY TTLVELSKTL
201: KLQNCAVWMP NESRSQMNLT HELSPSSAAG SHRSLPINDP DVLEITKNKG VRILRQDSVL AASSSGGSGE PCAVAAIRMP LLRASDFKGG TPELVDTRYA
301: ILVLVLSSVD ERVWSYDEME IVEVVADQVA VALSHATVLE ESQTMREKLE MRNRVLQQAK ENAMKASQAR TSFQKVMNNG MRRPMHSILG LLSIFQDEKA
401: SSDQRMIVDT MVKTSTVLST LINDAMEISA KDDGRFPVEM KPFQLHLLVR EASCLVKCLC VYKGFGFSTD VPTSLPNQVM GDEKRTFQVL LHMVGHLLNV
501: SIGNGSVIFR VVLETGAETG NDKVWGTRRP STTDEYVTIK FEIEVSLEGS QSDSSISTIH FGGRRHNSKE VTEGLSFNMC KKLVQMMQGN IWMSSNSQGH
601: AQGMTLILRF QKQSSFRKRM FEYRNPLEQP ISSTMFRGLH VLLTDDDDVN RLVTRKLLEK LGCQVTAVST GFQCLSALGP SLTTFQVVIL DLQMPEMDGF
701: EVALRVRKFR SRSWPLIIAL TASSEEQVWE RCLQVGMNGL IRKPVLLQGL ADELQRLLQR GGGGDGL
Best Arabidopsis Sequence Match ( AT3G04580.2 )
(BLAST)
001: MLRSLGLGLL LFALLALVSG DNDYVSCNCD DEGFLSVHTI LECQRVSDLL IAIAYFSIPL ELLYFISFSN VPFKWVLVQF IAFIVLCGMT HLLNAWTYYG
101: PHSFQLMLWL TIFKFLTALV SCATAITLLT LIPLLLKWKV RELYLKQNVL ELNEEVGLMK RQKEMSVQVR MLTREIRKSL DKHMILRTTL VELSKILDLQ
201: NSAVWMPNEN RTEMHLTHEL RANPMRSFRV IPINDPDVVQ VRETKVVTIL RKNSVLAVES SGCGGSEEFG PVAAIRMPML HGLNFKGGTP EFVDTPYAIM
301: VLVLPSANSR VWTDKEIEIA EVVADQVAVA ISHASVLEES QLMREKLGIQ NRALLRAKQN AMMASQARNT CQKVMSHGMR RPMHTILGLL SMFQSESMSL
401: DQKIIVDALM KTSTVLSALI NDVIDISPKD NGKSALEVKR FQLHSLIREA ACVAKCLSVY KGYGFEMDVQ TRLPNLVVGD EKRTFQLVMY MLGYILDMTD
501: GGKTVTFRVI CEGTGTSQDK SKRETGMWKS HMSDDSLGVK FEVEINEIQN PPLDGSAMAM RHIPNRRYHS NGIKEGLSLG MCRKLAQMMQ GNIWISPKSH
601: GQTQSMQLVL RFQTRPSIRR SILAGNAPEL QHPNSNSILR GLRITLADDD DVNRTVTKRL LEKLGCEVTA VSSGFECLNA LSNVEMSYRV VILDLQMPEM
701: DGFEVAMKIR KFCGHHWPLI IALTASTEDH VRERCLQMGM NGMIQKPVLL HVMASELRRA LQTASE
Arabidopsis Description
EIN4EIN4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.