Factsheet for PGSC0003DMT400075775

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g008110.2.1	Tomato	plasma membrane	96.27	96.17
VIT_01s0011g06190.t01	Wine grape	mitochondrion	75.1	71.02
KRH49704	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	68.75	69.1
KRH60456	Soybean	golgi	69.35	68.05
KRH70376	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	69.35	67.52
KRH41756	Soybean	golgi	69.05	67.42
GSMUA_Achr8P22930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	57.36	67.1
GSMUA_Achr10P...	Banana	cytosol	58.17	65.35
Bra024849.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.54	64.42
CDY17631	Canola	cytosol, peroxisome, plasma membrane	67.64	63.78
CDY03101	Canola	cytosol, peroxisome, plasma membrane	67.64	63.78
GSMUA_Achr7P11260_001	Banana	mitochondrion	57.86	63.01
CDY03102	Canola	cytosol	4.54	62.5
AT2G01830.2	Thale cress	cytosol	67.04	61.57
CDY03106	Canola	cytosol	4.33	59.72
EER93561	Sorghum	cytosol	59.58	59.34
Zm00001d033786_P004	Maize	plasma membrane	59.58	59.28
TraesCS4D01G050400.1	Wheat	cytosol	59.07	58.84
TraesCS4A01G264800.1	Wheat	cytosol, peroxisome, plasma membrane	59.07	58.66
TraesCS4B01G050200.1	Wheat	cytosol	59.17	58.23
Os03t0717700-01	Rice	cytosol, mitochondrion, plasma membrane	58.97	58.21
HORVU4Hr1G008210.4	Barley	cytosol	58.67	57.97
TraesCS6D01G291900.1	Wheat	mitochondrion	56.35	57.63
Zm00001d013412_P004	Maize	cytosol, endoplasmic reticulum, plasma membrane	59.68	57.53
TraesCS6B01G342700.1	Wheat	mitochondrion	56.25	57.53
KRH49494	Soybean	mitochondrion	35.69	56.82
TraesCS6A01G312500.2	Wheat	cytosol	56.15	56.43
Zm00001d051812_P003	Maize	mitochondrion	54.94	55.9
Zm00001d017977_P002	Maize	mitochondrion	54.74	55.75
EES07292	Sorghum	mitochondrion	54.44	55.5
Os02t0738400-01	Rice	mitochondrion	56.35	55.24
PGSC0003DMT400084727	Potato	cytosol, golgi, plasma membrane	29.94	55.2
HORVU6Hr1G077070.5	Barley	mitochondrion	55.95	52.91
PGSC0003DMT400015729	Potato	cytosol	19.05	51.36
Zm00001d023818_P001	Maize	cytosol	13.51	46.53
PGSC0003DMT400020285	Potato	endoplasmic reticulum, plasma membrane, plastid	16.94	22.28
PGSC0003DMT400071109	Potato	cytosol, endoplasmic reticulum, plasma membrane	16.33	22.01
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	13.91	21.73
PGSC0003DMT400041983	Potato	plasma membrane	15.32	19.97
PGSC0003DMT400011818	Potato	extracellular, golgi, peroxisome	15.32	19.84
PGSC0003DMT400075949	Potato	cytosol	19.96	19.53
PGSC0003DMT400073847	Potato	plasma membrane	14.82	19.17
PGSC0003DMT400044244	Potato	plasma membrane	13.91	18.33
PGSC0003DMT400060160	Potato	endoplasmic reticulum	13.61	17.69
PGSC0003DMT400009219	Potato	plastid	20.56	16.85

Protein Annotations

Gene3D:1.10.287.130	EntrezGene:102603756	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300	InterPro:CHASE_dom
InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824
GO:GO:0004673	GO:GO:0004721	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006464	GO:GO:0006468
GO:GO:0006470	GO:GO:0006810	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007231
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008272	GO:GO:0009414	GO:GO:0009605
GO:GO:0009607	GO:GO:0009628	GO:GO:0009653	GO:GO:0009719	GO:GO:0009736	GO:GO:0009790
GO:GO:0009791	GO:GO:0009884	GO:GO:0009885	GO:GO:0009987	GO:GO:0009991	GO:GO:0010029
GO:GO:0010086	GO:GO:0016020	GO:GO:0016021	GO:GO:0016036	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0016772	GO:GO:0016787	GO:GO:0018106	GO:GO:0019538	GO:GO:0019899
GO:GO:0019901	GO:GO:0019955	GO:GO:0023014	GO:GO:0033500	GO:GO:0038023	GO:GO:0042742
GO:GO:0043424	GO:GO:0048509	GO:GO:0048831	GO:GO:0071329	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR006189
InterPro:IPR036890	UniProt:M1CVN9	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518	PFAM:PF03924
EnsemblPlantsGene:PGSC0003DMG400029463	PGSC:PGSC0003DMG400029463	EnsemblPlants:PGSC0003DMT400075775	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110
PFscan:PS50839	PANTHER:PTHR43719	PANTHER:PTHR43719:SF16	SMART:SM00387	SMART:SM00388	SMART:SM00448
SMART:SM01079	SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver
TMHMM:TMhelix	UniParc:UPI00029496D3	RefSeq:XP_006355050.1	SEG:seg	:	:

Description

Cytokinin receptor 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400029463]

Coordinates

chr4:-:2773872..2782425

Molecular Weight (calculated)

110673.0 Da

IEP (calculated)

6.892

GRAVY (calculated)

-0.214

Length

992 amino acids

Sequence
(BLAST)

001: MGEKMQSHHM VSVKGSEQFN SKRKHRFVPS QGYLPKLFAL WIIWCTFFSI ALYFYMDANH KEKRKEGLVS MCDQRARMLQ DQFSVSVNHV HALAILVSTF
101: HYEKNPSAID QNTFAEYTAR TAFERPLLSG VAYAERVLNS EREEFEREHG WTIKTMEKKP SPIRDEYSPV IFSQETVSYI ESLDMMSGEE DRENILRARA
201: SGKAVLTSPF RLLGSHHLGV VLTFPVYRSK LPENPTEHER VEATAGFLGG AFDVESLVEC LLGQLAANHP IIVNVYDVTN SSDPLIMYGH QNPNGDASLK
301: QVSKLDFGDP FRKHEMICRY LYEDPISWGA VTTAVFIFTI FLLIGYTGYK SASHINKVED DFHKMQELKV QAEAADVAKS QFLATVSHEI RTPMNGILGM
401: LALLLDTDLS STQRDYAQTA QDCGKSLIRL INEVLDRAKI EAGKLELEAV PFDLRSILDD VLSLFSDESR RKGVELAVFV SDKVPEIVMG DPGRFRQVIT
501: NLVNNSVKFT LRGHIFVQVH LAEQKKDGDK TDTCLNGGSE SIISSSAFHF KTLSGYETAD SQNTWNTFKH IIADNGLYYE SATKVVNDDL SRDVTVMVSV
601: EDTGIGIPLK TQDRVFTPFM QADSSTSRKY GGTGIGLSIS KCLVELMGGH ISFISRPKIG STFSFSVSFL RCEKHAVGDL KKSHSDDLPT SFKGLNAIIV
701: DEKPVRAAVT GYHLKRLGIR AEVVSSIKRA AATLGKNGSV VSKKLDMILV EKDSWISEDV DLNLHFPDIN QNGHMYKLPK MILLATNFTN TAEHEKAKAV
801: GFSVIMKPLR ASMLAACLQQ LIGIGNKSRG KDMCNGSPSL RGLLCGMKIL VVDDNRVNRR VAAGALKKFG AEVECAESGK AALALLQLPH NFDACFMDIQ
901: MPEMDGFEAT RRIRELESIA NEQQNGVLNW DGGTKRHMWH MPILAMTADV IHATLEKCLK CGMDGYVSKP FEEENLYEAV SKFFESKPNS DK

Best Arabidopsis Sequence Match ( AT2G01830.5 )
(BLAST)

0001: MQCSILSQLI TDMNWALNNH QEEEEEPRRI EISDSESLEN LKSSDFYQLG GGGALNSSEK PRKIDFWRSG LMGFAKMQQQ QQLQHSVAVK MNNNNNNDLM
0101: GNKKGSTFIQ EHRALLPKAL ILWIIIVGFI SSGIYQWMDD ANKIRREEVL VSMCDQRARM LQDQFSVSVN HVHALAILVS TFHYHKNPSA IDQETFAEYT
0201: ARTAFERPLL SGVAYAEKVV NFEREMFERQ HNWVIKTMDR GEPSPVRDEY APVIFSQDSV SYLESLDMMS GEEDRENILR ARETGKAVLT SPFRLLETHH
0301: LGVVLTFPVY KSSLPENPTV EERIAATAGY LGGAFDVESL VENLLGQLAG NQAIVVHVYD ITNASDPLVM YGNQDEEADR SLSHESKLDF GDPFRKHKMI
0401: CRYHQKAPIP LNVLTTVPLF FAIGFLVGYI LYGAAMHIVK VEDDFHEMQE LKVRAEAADV AKSQFLATVS HEIRTPMNGI LGMLAMLLDT ELSSTQRDYA
0501: QTAQVCGKAL IALINEVLDR AKIEAGKLEL ESVPFDIRSI LDDVLSLFSE ESRNKSIELA VFVSDKVPEI VKGDSGRFRQ IIINLVGNSV KFTEKGHIFV
0601: KVHLAEQSKD ESEPKNALNG GVSEEMIVVS KQSSYNTLSG YEAADGRNSW DSFKHLVSEE QSLSEFDISS NVRLMVSIED TGIGIPLVAQ GRVFMPFMQA
0701: DSSTSRNYGG TGIGLSISKC LVELMRGQIN FISRPHIGST FWFTAVLEKC DKCSAINHMK KPNVEHLPST FKGMKAIVVD AKPVRAAVTR YHMKRLGINV
0801: DVVTSLKTAV VAAAAFERNG SPLPTKPQLD MILVEKDSWI STEDNDSEIR LLNSRTNGNV HHKSPKLALF ATNITNSEFD RAKSAGFADT VIMKPLRASM
0901: IGACLQQVLE LRKTRQQHPE GSSPATLKSL LTGKKILVVD DNIVNRRVAA GALKKFGAEV VCAESGQVAL GLLQIPHTFD ACFMDIQMPQ MDGFEATRQI
1001: RMMEKETKEK TNLEWHLPIL AMTADVIHAT YEECLKSGMD GYVSKPFEEE NLYKSVAKSF KPNPISPSS

Arabidopsis Description

AHK4Histidine kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.