Factsheet for TraesCS6B01G342700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G291900.1	Wheat	mitochondrion	98.87	98.87
TraesCS6A01G312500.2	Wheat	cytosol	98.14	96.45
HORVU6Hr1G077070.5	Barley	mitochondrion	96.7	89.42
Os02t0738400-01	Rice	mitochondrion	84.85	81.32
EES07292	Sorghum	mitochondrion	80.82	80.58
Zm00001d017977_P002	Maize	mitochondrion	80.72	80.39
Zm00001d051812_P003	Maize	mitochondrion	80.52	80.1
Zm00001d023818_P001	Maize	cytosol	21.44	72.22
TraesCS4B01G050200.1	Wheat	cytosol	61.34	59.03
KRH49704	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	58.04	57.04
CDY03102	Canola	cytosol	4.23	56.94
VIT_01s0011g06190.t01	Wine grape	mitochondrion	61.24	56.63
PGSC0003DMT400075775	Potato	endoplasmic reticulum, golgi, plasma membrane	57.53	56.25
Solyc04g008110.2.1	Tomato	plasma membrane	57.22	55.89
CDY03106	Canola	cytosol	4.12	55.56
KRH70376	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	58.35	55.54
KRH41756	Soybean	golgi	57.63	55.02
Bra024849.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.76	54.81
KRH60456	Soybean	golgi	57.01	54.7
CDY17631	Canola	cytosol, peroxisome, plasma membrane	58.87	54.28
CDY03101	Canola	cytosol, peroxisome, plasma membrane	58.76	54.18
AT2G01830.2	Thale cress	cytosol	58.66	52.69
KRH49494	Soybean	mitochondrion	31.34	48.8
TraesCS3B01G469000.1	Wheat	cytosol, golgi, mitochondrion, peroxisome	47.32	45.49
TraesCS5B01G001600.1	Wheat	plasma membrane	13.61	20.95
TraesCS7B01G405100.1	Wheat	nucleus	20.82	20.85
TraesCS5B01G533800.1	Wheat	endoplasmic reticulum, golgi	15.57	20.57
TraesCS4B01G039300.1	Wheat	cytosol, golgi, plasma membrane	13.2	20.16
TraesCS2B01G495500.1	Wheat	nucleus	11.86	18.95
TraesCS1B01G127000.1	Wheat	cytosol, golgi, plasma membrane	12.16	18.5
TraesCS7B01G049100.1	Wheat	plasma membrane	18.87	16.59
TraesCS7B01G049400.1	Wheat	plasma membrane	17.53	16.27
TraesCS2B01G023800.1	Wheat	plasma membrane	12.68	15.99
TraesCS6B01G360200.1	Wheat	cytosol, endoplasmic reticulum, golgi	11.96	15.93
TraesCS6B01G439600.1	Wheat	mitochondrion	12.78	15.82
TraesCS6B01G314600.1	Wheat	plasma membrane	11.13	14.81
TraesCS5B01G527300.1	Wheat	cytosol, golgi, plasma membrane	4.43	11.47

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300	InterPro:CHASE_dom	InterPro:CheY-like_superfamily
ncoils:Coil	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0038023
InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR001789
InterPro:IPR005467	InterPro:IPR006189	InterPro:IPR036890	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518
PFAM:PF03924	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PFscan:PS50839	PFscan:PS51257
PANTHER:PTHR43719	PANTHER:PTHR43719:SF2	SMART:SM00387	SMART:SM00388	SMART:SM00448	SMART:SM01079
SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS6B01G342700	EnsemblPlants:TraesCS6B01G342700.1	TIGR:cd00075	TIGR:cd00082	TIGR:cd00156	SEG:seg

Description

No Description!

Coordinates

chr6B:-:603356238..603362163

Molecular Weight (calculated)

108264.0 Da

IEP (calculated)

6.362

GRAVY (calculated)

-0.242

Length

970 amino acids

Sequence
(BLAST)

001: MGKYAARRGW RRLAAVAWLV AAVACSAAVH WQLRRETMER AEERLVSMCE ERARMLQEQF GVTVNHVHAL AILISTFHFE KNPSALDQDT FAKYTARTSF
101: ERPLLNGVAY AQRLFPHEKE TFERQHGWIM RTMNREAAPL QDEYAPVIFS QDTVSYLARM DMMSGEEDRE NILRARETGK PVLTNPFRLL GSNHLGVVLT
201: FAVYRPDLPA DASVEQRVEA TAGYLGGAFD VESLVENLLS KLAGNQDILV NVYDVTNASE PMAMYGSQTP DNKVDLLHVS MLDFGDPFRK HEMRCRYGQK
301: PPMPWSAISN PMGCFVIWML IGYIICAAWS RYDKVSEDCR KMEELKTQAE AADIAKSQFL ATVSHEIRTP MNGVLGMLDM LLGTDLTMTQ KDFAQTAQDC
401: GKALIILIND VLDRAKFEAG RLELEEVPFD LRTLTDDVIS LFASKLRAKC IELAVFVSDD VPKLVTGDPW RFRQILTNLV GNAVKFTERG HVFVRVSLAD
501: NSTMEANRVP NGNLNGKDCK VEPTANGAFN TLSGFQAADE RNSWEYFKLL LSDKELLSDE LEGKKSSQND PDHVTLMISI EDTGVGIPLH AQDRVFTPFM
601: QADSSTSRNY GGTGIGLSIS KCLAELMGGQ ISFISRPSIG STFTFSAVVK RASKDTSCDS ERSLSEALPT AFRGMKAILV DGKPVRGAVT RYHLNRLGII
701: VQVVNNMSMG IQAFGKNGTT ESREKPSMLF VENDIWRPET DIQLSNRLHT LRMNGQAHEL PKLILLVTSE ADKDKYGSTF NTVMCKPLRA STIASCLQQL
801: LKVDIPARKE NQNRPSFLRS LLVGKNILVV DDNKVNLRVA QAALKKYGAK VHCVESGKDA ISLLQPPHCF HACFMDVQMP EMDGFEATRQ IREMEKKANE
901: EKREQSSSGE GSTFVEWHLP VLAMTADVIQ ATYEECMKSG MDGYVSKPFD EQQLYQAVSR LVVGTADLAS

Best Arabidopsis Sequence Match ( AT2G01830.1 )
(BLAST)

0001: MNWALNNHQE EEEEPRRIEI SDSESLENLK SSDFYQLGGG GALNSSEKPR KIDFWRSGLM GFAKMQQQQQ LQHSVAVKMN NNNNNDLMGN KKGSTFIQEH
0101: RALLPKALIL WIIIVGFISS GIYQWMDDAN KIRREEVLVS MCDQRARMLQ DQFSVSVNHV HALAILVSTF HYHKNPSAID QETFAEYTAR TAFERPLLSG
0201: VAYAEKVVNF EREMFERQHN WVIKTMDRGE PSPVRDEYAP VIFSQDSVSY LESLDMMSGE EDRENILRAR ETGKAVLTSP FRLLETHHLG VVLTFPVYKS
0301: SLPENPTVEE RIAATAGYLG GAFDVESLVE NLLGQLAGNQ AIVVHVYDIT NASDPLVMYG NQDEEADRSL SHESKLDFGD PFRKHKMICR YHQKAPIPLN
0401: VLTTVPLFFA IGFLVGYILY GAAMHIVKVE DDFHEMQELK VRAEAADVAK SQFLATVSHE IRTPMNGILG MLAMLLDTEL SSTQRDYAQT AQVCGKALIA
0501: LINEVLDRAK IEAGKLELES VPFDIRSILD DVLSLFSEES RNKSIELAVF VSDKVPEIVK GDSGRFRQII INLVGNSVKF TEKGHIFVKV HLAEQSKDES
0601: EPKNALNGGV SEEMIVVSKQ SSYNTLSGYE AADGRNSWDS FKHLVSEEQS LSEFDISSNV RLMVSIEDTG IGIPLVAQGR VFMPFMQADS STSRNYGGTG
0701: IGLSISKCLV ELMRGQINFI SRPHIGSTFW FTAVLEKCDK CSAINHMKKP NVEHLPSTFK GMKAIVVDAK PVRAAVTRYH MKRLGINVDV VTSLKTAVVA
0801: AAAFERNGSP LPTKPQLDMI LVEKDSWIST EDNDSEIRLL NSRTNGNVHH KSPKLALFAT NITNSEFDRA KSAGFADTVI MKPLRASMIG ACLQQVLELR
0901: KTRQQHPEGS SPATLKSLLT GKKILVVDDN IVNRRVAAGA LKKFGAEVVC AESGQVALGL LQIPHTFDAC FMDIQMPQMD GFEATRQIRM MEKETKEKTN
1001: LEWHLPILAM TADVIHATYE ECLKSGMDGY VSKPFEEENL YKSVAKSFKP NPISPSS

Arabidopsis Description

AHK4Histidine kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.