Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G302000.1 | |
| TraesCS4B01G012100.1 | |
| TraesCS4D01G010200.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G40940.1 | TraesCS4A01G302000.1 | AT5G03730.1 | 9560288 |
| AT2G40940.1 | TraesCS4B01G012100.1 | AT5G03730.1 | 9560288 |
| AT2G40940.1 | TraesCS4D01G010200.1 | AT5G03730.1 | 9560288 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G274300.1 | Wheat | cytosol, golgi, plasma membrane | 99.37 | 99.37 |
| TraesCS4D01G036400.2 | Wheat | cytosol, golgi, plasma membrane | 98.9 | 98.9 |
| Os03t0701700-02 | Rice | cytosol, plasma membrane, vacuole | 91.18 | 91.04 |
| EER91030 | Sorghum | cytosol | 90.08 | 90.08 |
| Zm00001d033642_P001 | Maize | plasma membrane | 89.61 | 89.75 |
| Zm00001d013486_P001 | Maize | plasma membrane | 89.45 | 89.59 |
| HORVU4Hr1G006260.4 | Barley | plastid | 88.03 | 87.07 |
| TraesCS5B01G001600.1 | Wheat | plasma membrane | 85.83 | 86.51 |
| Zm00001d028026_P001 | Maize | endoplasmic reticulum, extracellular | 32.76 | 84.21 |
| GSMUA_Achr11P... | Banana | cytosol | 79.37 | 79.37 |
| GSMUA_Achr11P... | Banana | cytosol | 44.88 | 77.45 |
| TraesCS5B01G527300.1 | Wheat | cytosol, golgi, plasma membrane | 45.67 | 77.33 |
| GSMUA_Achr5P21290_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 67.87 | 74.7 |
| VIT_07s0005g00850.t01 | Wine grape | cytosol | 74.49 | 74.37 |
| KRG96477 | Soybean | cytosol | 72.76 | 72.64 |
| KRH68220 | Soybean | cytosol | 72.44 | 72.33 |
| CDX80113 | Canola | plasma membrane | 68.19 | 70.64 |
| Bra004449.1-P | Field mustard | plasma membrane | 67.56 | 70.21 |
| AT2G40940.1 | Thale cress | cytosol, nucleus, plasma membrane | 67.4 | 69.82 |
| CDY63851 | Canola | plasma membrane | 68.35 | 69.66 |
| TraesCS1B01G127000.1 | Wheat | cytosol, golgi, plasma membrane | 69.45 | 69.12 |
| Solyc09g075440.2.1 | Tomato | plasma membrane | 67.09 | 67.09 |
| PGSC0003DMT400081399 | Potato | cytosol, plasma membrane, vacuole | 66.77 | 66.77 |
| Zm00001d043247_P001 | Maize | nucleus | 23.62 | 45.05 |
| Zm00001d013338_P002 | Maize | cytosol | 23.31 | 39.57 |
| TraesCS2B01G023800.1 | Wheat | plasma membrane | 36.69 | 30.3 |
| TraesCS6B01G439600.1 | Wheat | mitochondrion | 36.69 | 29.72 |
| TraesCS6B01G360200.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 30.71 | 26.79 |
| TraesCS6B01G314600.1 | Wheat | plasma membrane | 30.08 | 26.2 |
| TraesCS2B01G495500.1 | Wheat | nucleus | 14.33 | 14.99 |
| TraesCS6B01G342700.1 | Wheat | mitochondrion | 20.16 | 13.2 |
| TraesCS4B01G050200.1 | Wheat | cytosol | 20.63 | 13.0 |
| TraesCS3B01G469000.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome | 20.63 | 12.98 |
| TraesCS5B01G533800.1 | Wheat | endoplasmic reticulum, golgi | 13.23 | 11.44 |
| TraesCS7B01G405100.1 | Wheat | nucleus | 17.32 | 11.35 |
| TraesCS7B01G049400.1 | Wheat | plasma membrane | 15.12 | 9.19 |
| TraesCS7B01G049100.1 | Wheat | plasma membrane | 14.33 | 8.25 |
Protein Annotations
| Gene3D:1.10.287.130 | MapMan:11.5.2.1 | Gene3D:3.30.450.40 | Gene3D:3.30.565.10 | InterPro:GAF | InterPro:GAF-like_dom_sf |
| GO:GO:0000155 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0016772 | GO:GO:0019538 | GO:GO:0038023 |
| InterPro:HATPase_C | InterPro:HATPase_C_sf | InterPro:HisK_dim/P | InterPro:HisK_dim/P_sf | InterPro:His_kinase_dom | InterPro:IPR005467 |
| InterPro:IPR029016 | InterPro:IPR036890 | PFAM:PF00512 | PFAM:PF01590 | PFAM:PF02518 | PRINTS:PR00344 |
| PFscan:PS50109 | PANTHER:PTHR24423 | PANTHER:PTHR24423:SF615 | SMART:SM00065 | SMART:SM00387 | SMART:SM00388 |
| SUPFAM:SSF47384 | SUPFAM:SSF55781 | SUPFAM:SSF55874 | InterPro:Sig_transdc_His_kin-like_C | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G039300 |
| EnsemblPlants:TraesCS4B01G039300.1 | TIGR:cd00075 | TIGR:cd00082 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4B:-:28069375..28072756
Molecular Weight (calculated)
71004.7 Da
IEP (calculated)
6.825
GRAVY (calculated)
0.105
Length
635 amino acids
Sequence
(BLAST)
(BLAST)
001: MERCDCIEPL WPTDELLIKY QYISDFFIAL AYFSIPLELI YFVKKSSFFP YRWVLIQFGA FIVLCGATHL INLWTFTTHT KTVAMVMTVA KVSTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAEELD WEMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTIVEL GRTLGLEECA LWMPSRSGSS LQLSHTLRHQ
201: ITVGSSISIN LPVINQVFSS NRAIIIPHTS PLARIRPLAG RYVPPEVAAV RVPLLNLSNF QINDWPELSA KSYAIMVLML PSDSARNWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAEMA IRARNDFLAV MNHEMRTPMN AIIALSSLLL ETELTPEQRL MVETVLKSSN LLATLINDVL
401: DLSKLEDRSL ELEIRAFNLH AVFKEVMGFI RPIAAIKRLS MSVMLAPDLP LCAIGDEKRL MQTILNISGN AVKFTKEGHI TLLASVLKPD SLREFRTPDF
501: DPAASDDHFY LKVQLKDTGC GISPQDLPHV FTKFAQTQPG GTQGYSGSGL GLAICRRFVT LMGGHIWLDS EGAGRGCTAT FIIRLGVSDN TDSYQQQLTP
601: LAWPGSANVE SAGPKALHEE TWPPSSLKPR YQRSV
101: TALMLVHIIP DLLSVKTREL FLKNKAEELD WEMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTIVEL GRTLGLEECA LWMPSRSGSS LQLSHTLRHQ
201: ITVGSSISIN LPVINQVFSS NRAIIIPHTS PLARIRPLAG RYVPPEVAAV RVPLLNLSNF QINDWPELSA KSYAIMVLML PSDSARNWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAEMA IRARNDFLAV MNHEMRTPMN AIIALSSLLL ETELTPEQRL MVETVLKSSN LLATLINDVL
401: DLSKLEDRSL ELEIRAFNLH AVFKEVMGFI RPIAAIKRLS MSVMLAPDLP LCAIGDEKRL MQTILNISGN AVKFTKEGHI TLLASVLKPD SLREFRTPDF
501: DPAASDDHFY LKVQLKDTGC GISPQDLPHV FTKFAQTQPG GTQGYSGSGL GLAICRRFVT LMGGHIWLDS EGAGRGCTAT FIIRLGVSDN TDSYQQQLTP
601: LAWPGSANVE SAGPKALHEE TWPPSSLKPR YQRSV
001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM
Arabidopsis Description
ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.