CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG30326
OQU89015

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	KXG30326	AT5G03730.1	9560288
AT2G40940.1	OQU89015	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033642_P001	Maize	plasma membrane	98.11	98.27
Zm00001d013486_P001	Maize	plasma membrane	98.11	98.27
Zm00001d028026_P001	Maize	endoplasmic reticulum, extracellular	37.01	95.14
Os03t0701700-02	Rice	cytosol, plasma membrane, vacuole	93.54	93.4
TraesCS4D01G036400.2	Wheat	cytosol, golgi, plasma membrane	90.55	90.55
TraesCS4A01G274300.1	Wheat	cytosol, golgi, plasma membrane	90.39	90.39
TraesCS4B01G039300.1	Wheat	cytosol, golgi, plasma membrane	90.08	90.08
GSMUA_Achr11P...	Banana	cytosol	81.57	81.57
HORVU4Hr1G006260.4	Barley	plastid	80.79	79.91
GSMUA_Achr11P...	Banana	cytosol	44.57	76.9
VIT_07s0005g00850.t01	Wine grape	cytosol	75.75	75.63
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.19	75.04
KRG96477	Soybean	cytosol	73.7	73.58
KRH68220	Soybean	cytosol	73.39	73.27
EES19059	Sorghum	plasma membrane	72.91	73.26
CDX80113	Canola	plasma membrane	69.76	72.27
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	69.29	71.78
Bra004449.1-P	Field mustard	plasma membrane	68.98	71.69
CDY63851	Canola	plasma membrane	69.76	71.11
Solyc09g075440.2.1	Tomato	plasma membrane	69.61	69.61
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	69.29	69.29
Zm00001d043247_P001	Maize	nucleus	26.93	51.35
Zm00001d013338_P002	Maize	cytosol	26.93	45.72
OQU85974	Sorghum	plasma membrane	36.85	30.15
EES10426	Sorghum	plasma membrane	36.38	29.88
EES06508	Sorghum	mitochondrion, plasma membrane	29.76	22.85
KXG36402	Sorghum	plasma membrane	29.92	22.22
EER93561	Sorghum	cytosol	21.89	13.96
EES07292	Sorghum	mitochondrion	21.26	13.87
KXG34012	Sorghum	cytosol, peroxisome, plasma membrane	21.89	13.83
KXG26059	Sorghum	endoplasmic reticulum, extracellular, golgi	10.71	12.01
OQU76804	Sorghum	nucleus	17.95	11.89
EER94128	Sorghum	extracellular, plasma membrane	12.91	11.04
KXG19481	Sorghum	plasma membrane	15.59	9.07

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.5.2.1	Gene3D:3.30.450.40	Gene3D:3.30.565.10	EntrezGene:8063415	UniProt:C5WNT8
EnsemblPlants:EER91030	ProteinID:EER91030	ProteinID:EER91030.1	InterPro:GAF	InterPro:GAF-like_dom_sf	GO:GO:0000155
GO:GO:0000160	GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0016772	GO:GO:0019538	GO:GO:0023014	GO:GO:0038023
InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf	InterPro:His_kinase_dom	InterPro:IPR005467
InterPro:IPR029016	InterPro:IPR036890	PFAM:PF00512	PFAM:PF01590	PFAM:PF02518	PRINTS:PR00344
PFscan:PS50109	PANTHER:PTHR24423	PANTHER:PTHR24423:SF615	SMART:SM00065	SMART:SM00387	SMART:SM00388
EnsemblPlantsGene:SORBI_3001G124200	SUPFAM:SSF47384	SUPFAM:SSF55781	SUPFAM:SSF55874	unigene:Sbi.824	InterPro:Sig_transdc_His_kin-like_C
TMHMM:TMhelix	UniParc:UPI0001A825D8	RefSeq:XP_002464032.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:9801872..9806965

Molecular Weight (calculated)

70639.4 Da

IEP (calculated)

7.486

GRAVY (calculated)

0.144

Length

635 amino acids

Sequence
(BLAST)

001: MDGCDCIEPL WPTDDLLVKY QYISDFFIAL AYFSIPLELI YFVKKSSFFP YRWVLIQFGA FIVLCGATHL INLWTFTTHT KTVAMVMTIA KVSTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAEQLD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLGLEECA LWMPSRSGSS LQLSHTLRHQ
201: ITVGSSVPIN LPVVNQVFSS NRAIIIPHTS PLARIRPLAG RYVPPEVAAV RVPLLHLSNF QINDWPELSA KSFAIMVLML PSDSARKWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAEMA IRARNDFLAV MNHEMRTPMN AIIALSSLLL ETELTPEQRL MVETVLKSSN LLATLINDVL
401: DLSKLEDGSL ELEIKAFNLH AVFKEVMSFI KPIASIKRLS VSVMLAPDLP LCAIGDEKRL MQTILNISGN AVKFTKEGHI TLVASIVKAD SLREFRTPEF
501: HPTASDDHFY LKVQVKDTGC GISPQDLPHV FTKFAHPQSG GNRGFNGSGL GLAICKRFVS LMGGHIWIDS EGTGRGCTAT FVIKLGVCDN TNTYQQQLIP
601: LVWPSSADSD LSAPKVLPDG RGSATSLKSR YQRSV

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.