Factsheet for GSMUA_Achr11P18040_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr8P07600_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	GSMUA_Achr11P...	AT5G03730.1	9560288
AT2G40940.1	GSMUA_Achr11P...	AT5G03730.1	9560288
AT2G40940.1	GSMUA_Achr8P07600_001	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G344200.1	Wheat	cytosol, golgi, plasma membrane	50.54	60.78
HORVU5Hr1G119650.1	Barley	endoplasmic reticulum	58.15	59.94
HORVU6Hr1G045040.2	Barley	cytosol	57.34	59.77
TraesCS5B01G527300.1	Wheat	cytosol, golgi, plasma membrane	57.88	56.8
GSMUA_Achr11P...	Banana	cytosol	77.99	45.2
Zm00001d033642_P001	Maize	plasma membrane	77.45	44.95
Zm00001d013486_P001	Maize	plasma membrane	77.45	44.95
TraesCS5B01G001600.1	Wheat	plasma membrane	76.9	44.92
TraesCS4A01G274300.1	Wheat	cytosol, golgi, plasma membrane	77.45	44.88
TraesCS4B01G039300.1	Wheat	cytosol, golgi, plasma membrane	77.45	44.88
TraesCS5D01G002600.1	Wheat	cytosol, plasma membrane, vacuole	77.17	44.87
TraesCS5A01G002600.1	Wheat	cytosol, plasma membrane, vacuole	77.17	44.87
Os03t0701700-02	Rice	cytosol, plasma membrane, vacuole	77.45	44.81
TraesCS4D01G036400.2	Wheat	cytosol, golgi, plasma membrane	76.9	44.57
EER91030	Sorghum	cytosol	76.9	44.57
VIT_07s0005g00850.t01	Wine grape	cytosol	73.64	42.61
HORVU5Hr1G000590.2	Barley	cytosol, mitochondrion, plastid	77.45	42.54
KRG96477	Soybean	cytosol	72.01	41.67
Bra004449.1-P	Field mustard	plasma membrane	68.48	41.24
CDX80113	Canola	plasma membrane	68.48	41.11
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	68.21	40.95
KRH68220	Soybean	cytosol	70.65	40.88
CDY63851	Canola	plasma membrane	68.48	40.45
Solyc09g075440.2.1	Tomato	plasma membrane	69.57	40.31
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	69.57	40.31
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.5	39.86
HORVU4Hr1G006260.4	Barley	plastid	63.86	36.6
GSMUA_Achr5P00120_001	Banana	cytosol	28.8	29.61
GSMUA_Achr8P14350_001	Banana	endoplasmic reticulum	44.84	21.8
GSMUA_Achr11P...	Banana	plasma membrane	44.57	21.64
GSMUA_Achr7P26840_001	Banana	plasma membrane	36.41	20.21
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	35.33	19.94
Zm00001d028026_P001	Maize	endoplasmic reticulum, extracellular	10.05	14.98
GSMUA_Achr4P17470_001	Banana	cytosol	14.95	7.1
Zm00001d043247_P001	Maize	nucleus	6.25	6.91
GSMUA_Achr10P...	Banana	cytosol	15.76	6.57
GSMUA_Achr1P22740_001	Banana	cytosol	13.86	6.27
GSMUA_Achr7P11260_001	Banana	mitochondrion	15.22	6.15
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	15.76	5.95
GSMUA_Achr8P22930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	13.59	5.9
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	15.76	5.81
GSMUA_Achr4P15980_001	Banana	cytosol	15.22	5.61
GSMUA_AchrUn_...	Banana	cytosol	13.86	5.36
GSMUA_Achr1P23390_001	Banana	cytosol	11.68	4.92
Zm00001d013338_P002	Maize	cytosol	3.8	3.74
GSMUA_Achr3P22920_001	Banana	extracellular	7.07	2.71

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.5.2.1	Gene3D:3.30.450.40	InterPro:GAF-like_dom_sf	GO:GO:0000155	GO:GO:0000160
GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0038023	EnsemblPlantsGene:GSMUA_Achr11G18040_001	EnsemblPlants:GSMUA_Achr11P18040_001	EnsemblPlants:GSMUA_Achr11T18040_001	InterPro:HisK_dim/P_sf	InterPro:IPR029016
UniProt:M0RT84	PANTHER:PTHR24423	PANTHER:PTHR24423:SF615	SUPFAM:SSF47384	SUPFAM:SSF55781	TMHMM:TMhelix
UniParc:UPI0002963584	SEG:seg	:	:	:	:

Description

Ethylene receptor [Source:GMGC_GENE;Acc:GSMUA_Achr11G18040_001]

Coordinates

chr11:+:19541972..19544164

Molecular Weight (calculated)

42021.4 Da

IEP (calculated)

5.682

GRAVY (calculated)

0.218

Length

368 amino acids

Sequence
(BLAST)

001: MEWCDCIEPQ WHADELLVKY QYTSDFLIAF AYFSIPLELI YFVKKSSFFP YRWLLIQFGA FIVLCGSTHM ISLRTFTMYS RTVALLMTVA KISTAVVSCA
101: TALMLVHIIP ELLSVKTREL FLKNKAEELD REIGVLRAQE ETERHVRMLT HEIRSTLDRH TILKTTFIEL GRTLDLEECA FWMPSRNGIN LQLSHTLHHQ
201: MPLGSVVCTD LPVINQVLSN DVNYWPELSL KSYAIMVLMS ARKWHVHEME LVEAVADQVA VALSHAAILE ESMRACDLLL EQNVALDSAC QEAETAINAR
301: NDFQTVMTHE MWTSIHATIA LSSLLLETEL TPEQQSMLEI AAFKLHTIFR EVTNLMKPIA AVKNLSSL

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.