Factsheet for HORVU6Hr1G045040.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G001850.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40940.1	HORVU4Hr1G001850.1	AT5G03730.1	9560288

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G119650.1	Barley	endoplasmic reticulum	75.35	74.51
GSMUA_Achr11P...	Banana	cytosol	59.77	57.34
HORVU5Hr1G000590.2	Barley	cytosol, mitochondrion, plastid	88.39	46.57
GSMUA_Achr11P...	Banana	cytosol	79.04	43.94
HORVU6Hr1G080170.1	Barley	plasma membrane	21.81	40.96
VIT_07s0005g00850.t01	Wine grape	cytosol	72.52	40.25
Bra004449.1-P	Field mustard	plasma membrane	69.41	40.1
CDX80113	Canola	plasma membrane	69.41	39.97
AT2G40940.1	Thale cress	cytosol, nucleus, plasma membrane	68.56	39.48
KRG96477	Soybean	cytosol	71.1	39.47
CDY63851	Canola	plasma membrane	69.41	39.33
KRH68220	Soybean	cytosol	69.97	38.84
HORVU1Hr1G022550.1	Barley	cytosol, golgi, plasma membrane	69.97	38.71
GSMUA_Achr5P21290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.19	37.44
Solyc09g075440.2.1	Tomato	plasma membrane	66.86	37.17
PGSC0003DMT400081399	Potato	cytosol, plasma membrane, vacuole	66.57	37.01
HORVU4Hr1G006260.4	Barley	plastid	65.72	36.14
HORVU0Hr1G001750.2	Barley	endoplasmic reticulum	43.63	19.82
HORVU2Hr1G000030.1	Barley	plasma membrane	43.34	19.74
HORVU6Hr1G091700.6	Barley	cytosol, mitochondrion, plasma membrane	42.21	18.13
HORVU6Hr1G071860.2	Barley	plasma membrane	35.13	17.17
HORVU6Hr1G080180.1	Barley	cytosol	11.9	8.35
HORVU4Hr1G008210.4	Barley	cytosol	13.6	4.78
HORVU3Hr1G094870.10	Barley	plasma membrane	12.75	4.3
HORVU6Hr1G077070.5	Barley	mitochondrion	11.9	4.0
HORVU2Hr1G106760.1	Barley	cytosol	5.95	3.36
HORVU7Hr1G030040.2	Barley	extracellular	2.55	0.87

Protein Annotations

EnsemblPlants:HORVU6Hr1G045040.2	EnsemblPlantsGene:HORVU6Hr1G045040	Gene3D:3.30.450.40	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:GAF	InterPro:GAF-like_dom_sf	InterPro:IPR029016
ncoils:Coil	PANTHER:PTHR24423	PANTHER:PTHR24423:SF615	PFAM:PF01590	SEG:seg	SMART:SM00065
SUPFAM:SSF55781	TMHMM:TMhelix	UniParc:UPI000B47B5C1	UniProt:A0A287U2E5	MapMan:11.5.2.1	:

Description

No Description!

Coordinates

chrchr6H:-:261313677..261314885

Molecular Weight (calculated)

36118.5 Da

IEP (calculated)

7.907

GRAVY (calculated)

0.277

Length

353 amino acids

Sequence
(BLAST)

001: MEGCDCIEPF WPTDDLLIKY QYISDFFIAL AYFSIPLELI YFVKKSSFFP YRWVLIQFGA FIVLCGATHL INLWTFTMHT KTVAIVMTVA KVSTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKKKADELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLGLEECA LWMPSRSGSS LQLTHTLRHQ
201: IPAGSSVQIN LPVVNQVFSS NRAIIVPHTS PLARIRPVQG RYVPPEVAAV RVPLLHLSNF QINDWPELSA KSYAIMVLML PSDSARKWHV HELELVEVVA
301: DQVGTTLSLI LYCSFLSXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XTL

Best Arabidopsis Sequence Match ( AT1G66340.1 )
(BLAST)

001: MEVCNCIEPQ WPADELLMKY QYISDFFIAI AYFSIPLELI YFVKKSAVFP YRWVLVQFGA FIVLCGATHL INLWTFTTHS RTVALVMTTA KVLTAVVSCA
101: TALMLVHIIP DLLSVKTREL FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA LWMPTRTGLE LQLSYTLRHQ
201: HPVEYTVPIQ LPVINQVFGT SRAVKISPNS PVARLRPVSG KYMLGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA
301: DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLMNDVL
401: DLSRLEDGSL QLELGTFNLH TLFREVLNLI KPIAVVKKLP ITLNLAPDLP EFVVGDEKRL MQIILNIVGN AVKFSKQGSI SVTALVTKSD TRAADFFVVP
501: TGSHFYLRVK VKDSGAGINP QDIPKIFTKF AQTQSLATRS SGGSGLGLAI SKRFVNLMEG NIWIESDGLG KGCTAIFDVK LGISERSNES KQSGIPKVPA
601: IPRHSNFTGL KVLVMDENGV SRMVTKGLLV HLGCEVTTVS SNEECLRVVS HEHKVVFMDV CMPGVENYQI ALRIHEKFTK QRHQRPLLVA LSGNTDKSTK
701: EKCMSFGLDG VLLKPVSLDN IRDVLSDLLE PRVLYEGM

Arabidopsis Description

ETR1Ethylene receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:P49333]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.