Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 1
- plasma membrane 2
Predictors | GFP | MS/MS | Papers | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU1Hr1G078170.6 | |
HORVU3Hr1G075800.5 | |
HORVU5Hr1G016190.3 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G27320.1 | HORVU1Hr1G078170.6 | AT5G43560.1 | 18642946 |
AT1G27320.1 | HORVU3Hr1G075800.5 | AT5G43560.1 | 18642946 |
AT1G27320.1 | HORVU5Hr1G016190.3 | AT5G43560.1 | 18642946 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G469000.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome | 91.69 | 95.14 |
TraesCS3A01G433200.1 | Wheat | peroxisome | 87.87 | 91.72 |
TraesCS3D01G426600.1 | Wheat | plasma membrane | 87.11 | 91.66 |
Zm00001d042312_P003 | Maize | golgi, mitochondrion, plasma membrane | 74.12 | 77.06 |
KXG34012 | Sorghum | cytosol, peroxisome, plasma membrane | 73.64 | 76.72 |
Os01t0923700-04 | Rice | endoplasmic reticulum, golgi, peroxisome | 74.02 | 75.76 |
Zm00001d012005_P002 | Maize | plasma membrane | 74.4 | 74.62 |
GSMUA_AchrUn_... | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 63.13 | 67.79 |
GSMUA_AchrUn_... | Banana | cytosol, golgi, plasma membrane | 63.61 | 66.73 |
GSMUA_Achr4P15980_001 | Banana | cytosol | 61.99 | 65.03 |
PGSC0003DMT400084727 | Potato | cytosol, golgi, plasma membrane | 32.57 | 63.38 |
VIT_01s0010g03780.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 59.41 | 59.87 |
Solyc05g015610.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 57.5 | 58.33 |
KRH42680 | Soybean | plasma membrane | 56.73 | 57.67 |
CDY03909 | Canola | endoplasmic reticulum, golgi, plasma membrane | 55.11 | 57.64 |
KRH58780 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 56.45 | 57.38 |
Bra030037.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 55.4 | 57.03 |
CDY15717 | Canola | endoplasmic reticulum, golgi, plasma membrane | 55.4 | 56.81 |
AT1G27320.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 55.97 | 56.56 |
VIT_04s0008g03460.t01 | Wine grape | plastid | 17.1 | 53.27 |
HORVU4Hr1G008210.4 | Barley | cytosol | 46.42 | 48.41 |
HORVU6Hr1G077070.5 | Barley | mitochondrion | 43.55 | 43.47 |
HORVU1Hr1G022550.1 | Barley | cytosol, golgi, plasma membrane | 12.42 | 20.38 |
HORVU5Hr1G000590.2 | Barley | cytosol, mitochondrion, plastid | 12.51 | 19.55 |
HORVU4Hr1G006260.4 | Barley | plastid | 11.56 | 18.85 |
HORVU2Hr1G106760.1 | Barley | cytosol | 10.79 | 18.08 |
HORVU0Hr1G001750.2 | Barley | endoplasmic reticulum | 12.13 | 16.34 |
HORVU2Hr1G000030.1 | Barley | plasma membrane | 11.94 | 16.13 |
HORVU6Hr1G080180.1 | Barley | cytosol | 7.35 | 15.31 |
HORVU6Hr1G080170.1 | Barley | plasma membrane | 2.67 | 14.89 |
HORVU6Hr1G091700.6 | Barley | cytosol, mitochondrion, plasma membrane | 11.46 | 14.6 |
HORVU7Hr1G030040.2 | Barley | extracellular | 13.85 | 14.01 |
HORVU5Hr1G119650.1 | Barley | endoplasmic reticulum | 4.68 | 13.73 |
HORVU6Hr1G071860.2 | Barley | plasma membrane | 9.36 | 13.57 |
HORVU6Hr1G045040.2 | Barley | cytosol | 4.3 | 12.75 |
Protein Annotations
Description
No Description!
Coordinates
chrchr3H:-:648170663..648176301
Molecular Weight (calculated)
116098.0 Da
IEP (calculated)
9.115
GRAVY (calculated)
-0.147
Length
1047 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTGAARSARG GGEGGAAGME GKGGAAAAAG LVGFLGMGFD RVRLLPLPLP LPEKLSAKAL RSHVRSTCHG SREARERRWR WMAMLWVVGW TLICLQVFRY
0101: SNSGAVEKRR DSLASMCDER ARMLQDQFNV SMNHLQALAI LVNTFHHSQT PSAITQATFA RYAERTAFER PLTSGVAYAV RVTHAERDQF ERQQGWSIKK
0201: MYSSPSSQGP GDAAVAEIRG PADEYAPVIF AQDAYKNVIS FDMLSGADDR ENIIRARESG KGVLTAPFQL LNGRLGVILT YSVYKSEPPA NARPQERIQA
0301: AVGYLGGIFD IEALVDKLLH QLAGKQSIMV NVYDTTTKEK PISMYGSNDT GGGMYHNSTL NFGDPSRRHE MHCRFMQKPP LPWLAITSSL GIYVIFLLIG
0401: YIIYATVHRI AKVEDDLQIM KDLKKRAEAA DVAKSQFLAT VSHEIRTPMN GVLGECVIDL IRNVFSIVFR LKGFKKLLLL SGMLQMLMDT DLDTTQQDYV
0501: RTAQASGKAL VSLINEVLDQ AKIESGKLEL DAVPLDVRLV CDDILSLFCG KAQEKGLELA VYVSDQVPQT LIGDPNRMRQ IITNLMGNSI KFTERGHIYL
0601: TVHVVEEVMC SLDVETEIQN TYNTLSGCEV AKRRLSWQSF RLFNMDLHSS ELPFAPIMPE TIRLIISVED TGVGIPLEAQ SRIFTPFMQV GPSIARIHGG
0701: TGIGLSISKC LVHLMKGEIG FVSKHHVGST FSFTAVLSRA RPNANVNKSP GFKGVSALVV DHRPVRANVT KYHLQRLGVK TELTNDVSQV IPKMNCASLV
0801: TRLVLVDKET WLKESHSMPQ LLSKLRSKDQ SDPPKVFLLE NPTNSIKSSS NISREHNLNV IMKPLRASML EASLRRVLGG VDKAHVKNGL VGNSALGSLL
0901: HKRKIIVVDD NAVNLKVAAG ALKKYGAEVI CADSGKKAIA LLKPPHSFDA CFMDIQMPEM DGFEATKRIR MMERELNERV ERGEAPPECA NVRRWRTPIL
1001: AMTADVIQAT YEHCLKCEMD GYVSKPFEGE QLYREVTRFF QNHDHVQ
0101: SNSGAVEKRR DSLASMCDER ARMLQDQFNV SMNHLQALAI LVNTFHHSQT PSAITQATFA RYAERTAFER PLTSGVAYAV RVTHAERDQF ERQQGWSIKK
0201: MYSSPSSQGP GDAAVAEIRG PADEYAPVIF AQDAYKNVIS FDMLSGADDR ENIIRARESG KGVLTAPFQL LNGRLGVILT YSVYKSEPPA NARPQERIQA
0301: AVGYLGGIFD IEALVDKLLH QLAGKQSIMV NVYDTTTKEK PISMYGSNDT GGGMYHNSTL NFGDPSRRHE MHCRFMQKPP LPWLAITSSL GIYVIFLLIG
0401: YIIYATVHRI AKVEDDLQIM KDLKKRAEAA DVAKSQFLAT VSHEIRTPMN GVLGECVIDL IRNVFSIVFR LKGFKKLLLL SGMLQMLMDT DLDTTQQDYV
0501: RTAQASGKAL VSLINEVLDQ AKIESGKLEL DAVPLDVRLV CDDILSLFCG KAQEKGLELA VYVSDQVPQT LIGDPNRMRQ IITNLMGNSI KFTERGHIYL
0601: TVHVVEEVMC SLDVETEIQN TYNTLSGCEV AKRRLSWQSF RLFNMDLHSS ELPFAPIMPE TIRLIISVED TGVGIPLEAQ SRIFTPFMQV GPSIARIHGG
0701: TGIGLSISKC LVHLMKGEIG FVSKHHVGST FSFTAVLSRA RPNANVNKSP GFKGVSALVV DHRPVRANVT KYHLQRLGVK TELTNDVSQV IPKMNCASLV
0801: TRLVLVDKET WLKESHSMPQ LLSKLRSKDQ SDPPKVFLLE NPTNSIKSSS NISREHNLNV IMKPLRASML EASLRRVLGG VDKAHVKNGL VGNSALGSLL
0901: HKRKIIVVDD NAVNLKVAAG ALKKYGAEVI CADSGKKAIA LLKPPHSFDA CFMDIQMPEM DGFEATKRIR MMERELNERV ERGEAPPECA NVRRWRTPIL
1001: AMTADVIQAT YEHCLKCEMD GYVSKPFEGE QLYREVTRFF QNHDHVQ
0001: MSLFHVLGFG VKIGHLFWML CCWFVSWFVD NGIEDKSGLL VGSVGDLEKT KMTTLKKKNK MWFWNKISSS GLKIPSFSYQ FLGSVKFNKA WWRKLVVVWV
0101: VFWVLVSIWT FWYFSSQAME KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS FERPLTSGVA YAMRVLHSER
0201: EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV
0301: YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV
0401: LSMVTSFGIL VIALLVAHII HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE LDVTQQDYVR TAQASGKALV
0501: SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES
0601: IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK
0701: GEIGFSSTPK VGSTFTFTAV FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA LHYLKIGTTT VNMILIEQEI
0801: WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV
0901: NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE
1001: ECLKCGMDGY VSKPFEAEQL YREVSRFFNS PSDTES
0101: VFWVLVSIWT FWYFSSQAME KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS FERPLTSGVA YAMRVLHSER
0201: EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV
0301: YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV
0401: LSMVTSFGIL VIALLVAHII HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE LDVTQQDYVR TAQASGKALV
0501: SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES
0601: IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK
0701: GEIGFSSTPK VGSTFTFTAV FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA LHYLKIGTTT VNMILIEQEI
0801: WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV
0901: NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE
1001: ECLKCGMDGY VSKPFEAEQL YREVSRFFNS PSDTES
Arabidopsis Description
AHK3HK3 [Source:UniProtKB/TrEMBL;Acc:A0A178WL02]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.