CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01550
EES16279
KXG22306
OQU79503

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27320.1	EES01550	AT5G43560.1	18642946
AT1G27320.1	EES16279	AT5G43560.1	18642946
AT1G27320.1	KXG22306	AT5G43560.1	18642946
AT1G27320.1	OQU79503	AT5G43560.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042312_P003	Maize	golgi, mitochondrion, plasma membrane	94.03	93.84
Zm00001d012005_P002	Maize	plasma membrane	93.13	89.66
Os01t0923700-04	Rice	endoplasmic reticulum, golgi, peroxisome	80.2	78.79
TraesCS3D01G426600.1	Wheat	plasma membrane	77.11	77.89
TraesCS3A01G433200.1	Wheat	peroxisome	77.11	77.27
TraesCS3B01G469000.1	Wheat	cytosol, golgi, mitochondrion, peroxisome	76.52	76.21
HORVU3Hr1G094870.10	Barley	plasma membrane	76.72	73.64
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	66.67	68.72
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	66.67	67.13
GSMUA_Achr4P15980_001	Banana	cytosol	64.88	65.33
PGSC0003DMT400084727	Potato	cytosol, golgi, plasma membrane	33.53	62.64
VIT_01s0010g03780.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	62.49	60.44
KRH58780	Soybean	endoplasmic reticulum, golgi, plasma membrane	60.5	59.03
KRH42680	Soybean	plasma membrane	60.2	58.74
CDY03909	Canola	endoplasmic reticulum, golgi, plasma membrane	57.81	58.04
Bra030037.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	58.41	57.72
Solyc05g015610.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	59.2	57.66
CDY15717	Canola	endoplasmic reticulum, golgi, plasma membrane	58.21	57.3
AT1G27320.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	58.61	56.85
VIT_04s0008g03460.t01	Wine grape	plastid	18.21	54.46
EER93561	Sorghum	cytosol	48.26	48.69
EES07292	Sorghum	mitochondrion	46.27	47.79
EER91030	Sorghum	cytosol	13.83	21.89
EES19059	Sorghum	plasma membrane	12.84	20.41
OQU76804	Sorghum	nucleus	19.3	20.23
KXG26059	Sorghum	endoplasmic reticulum, extracellular, golgi	11.04	19.61
EER94128	Sorghum	extracellular, plasma membrane	14.23	19.25
KXG19481	Sorghum	plasma membrane	19.0	17.51
EES10426	Sorghum	plasma membrane	13.23	17.21
OQU85974	Sorghum	plasma membrane	12.84	16.62
KXG36402	Sorghum	plasma membrane	11.64	13.68
EES06508	Sorghum	mitochondrion, plasma membrane	11.14	13.54

Protein Annotations

Gene3D:1.10.287.130	MapMan:11.4.2.1	Gene3D:3.30.450.350	Gene3D:3.40.50.2300	UniProt:A0A1B6Q7W2	InterPro:CHASE_dom
InterPro:CheY-like_superfamily	ncoils:Coil	GO:GO:0000003	GO:GO:0000155	GO:GO:0000160	GO:GO:0003674
GO:GO:0003824	GO:GO:0004673	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006810	GO:GO:0006950
GO:GO:0006970	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009409	GO:GO:0009414	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628
GO:GO:0009651	GO:GO:0009719	GO:GO:0009791	GO:GO:0009908	GO:GO:0009909	GO:GO:0009987
GO:GO:0009991	GO:GO:0010029	GO:GO:0010087	GO:GO:0010150	GO:GO:0010271	GO:GO:0016020
GO:GO:0016021	GO:GO:0016036	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016772
GO:GO:0018106	GO:GO:0019538	GO:GO:0023014	GO:GO:0034757	GO:GO:0038023	GO:GO:0040007
GO:GO:0042742	GO:GO:0043424	GO:GO:0048509	GO:GO:0048831	GO:GO:0070417	GO:GO:0071215
GO:GO:0071329	GO:GO:0080117	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HisK_dim/P	InterPro:HisK_dim/P_sf
InterPro:His_kinase_dom	InterPro:IPR001789	InterPro:IPR005467	InterPro:IPR006189	InterPro:IPR036890	EnsemblPlants:KXG34012
ProteinID:KXG34012	ProteinID:KXG34012.1	ProteinID:KXG34013.1	PFAM:PF00072	PFAM:PF00512	PFAM:PF02518
PFAM:PF03924	PRINTS:PR00344	PFscan:PS50109	PFscan:PS50110	PFscan:PS50839	PANTHER:PTHR43719
PANTHER:PTHR43719:SF14	SMART:SM00387	SMART:SM00388	SMART:SM00448	SMART:SM01079	EnsemblPlantsGene:SORBI_3003G407300
SUPFAM:SSF47384	SUPFAM:SSF52172	SUPFAM:SSF55874	InterPro:Sig_transdc_His_kin-like_C	InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix
UniParc:UPI000220720B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:71489991..71496210

Molecular Weight (calculated)

112380.0 Da

IEP (calculated)

8.306

GRAVY (calculated)

-0.226

Length

1005 amino acids

Sequence
(BLAST)

0001: MTVTARGRSG GGVGMEEKCD APGFGFLGLD RMRVLLPPLR LPEKLSASRT LRTHLFTNYR MRKVRDSSRW LIPLWVTIWV FIASLLYLRM SYQAVDKRRE
0101: SLAIMCDDRA RMLQDQLNVS MNHLQALAIL VSTFHHSKTP SAIDQKTFAW YAERTAFERP LTSGVAYGVK VTHAEREQFE RQQGWSIKKM YSSKTKKQSQ
0201: GQGNGEDAEV REPAEEYAPV IFAQDAYKHV ISFDLLSGAD DRDNVLRARE SGKGVLTAPF KLLNNRLGVI STYAVYKYEL PPNATPQDRI QAAIGYLGGI
0301: FDIEALVDKS LHQLAGKQSI MVNVYDTTNE KPISMYGSND TGSGMCQVST LNFGDPTRKH EMHCRFIQSP PWPWLAITTS IGIFVIGLLV GYIVYATAKR
0401: IARVEDDFQE MSLLKKRAED ADIAKSQFLA TVSHEIRTPM NGVLGMLQML MDTDLDTTQQ DYVRTAQASG KALVSLINEV LDQAKIESGK LELEAVPFDL
0501: RTVCDDILSL FCGKAQEKGL ELAVFVSDQV PQTLIGDPGR IRQIITNLVG NSIKFTEKGH IYLTVHVVEE IMHCLEVETT NTLSRYPVAN RKRSWENFQL
0601: FSRELNSSEM PFAPGASDSI SLIISVEDTG VGIPPDAQSR VFTPFMQVGP SIARIHGGTG IGLSISKCLV GLMKGEIGFA SKPQVGSTFT FTAVLTRAHS
0701: SGNENKSSEF KEINALVVDH RPVRAKVTKY HLQRLGVHTE LTTDLDQYIS KINCGSQIAK LVLIDKETWL EESHSMPHLV TKLRNKDQPD STKLFLLENP
0801: KSSVKSSLHI FREYNLNVIM KPLRASMLQV SLQRALGGID KLHCRNGVVG NSTLGSLLHK KRIIVVDDNI VNLKVAAGAL KKYGAEVTCA DSGKKAITLL
0901: KPPHRFDACF MDIQMPEMDG FEATRRIRVM ERDLNEQIER GEAPLECAGV RQWRTPILAM TADVIQATHE QCLKSEMDGY VSKPFEGEQL YREVARFFLN
1001: QDQVQ

Best Arabidopsis Sequence Match ( AT1G27320.1 )
(BLAST)

0001: MSLFHVLGFG VKIGHLFWML CCWFVSWFVD NGIEDKSGLL VGSVGDLEKT KMTTLKKKNK MWFWNKISSS GLKIPSFSYQ FLGSVKFNKA WWRKLVVVWV
0101: VFWVLVSIWT FWYFSSQAME KRKETLASMC DERARMLQDQ FNVSMNHVQA MSILISTFHH GKIPSAIDQR TFSEYTDRTS FERPLTSGVA YAMRVLHSER
0201: EEFERQQGWT IRKMYSLEQN PVHKDDYDLE ALEPSPVQEE YAPVIFAQDT VSHVVSLDML SGKEDRENVL RARSSGKGVL TAPFPLIKTN RLGVILTFAV
0301: YKRDLPSNAT PKERIEATNG YLGGVFDIES LVENLLQQLA SKQTILVNVY DITNHSQPIS MYGTNVSADG LERVSPLIFG DPLRKHEMRC RFKQKPPWPV
0401: LSMVTSFGIL VIALLVAHII HATVSRIHKV EEDCDKMKQL KKKAEAADVA KSQFLATVSH EIRTPMNGVL GMLHMLMDTE LDVTQQDYVR TAQASGKALV
0501: SLINEVLDQA KIESGKLELE EVRFDLRGIL DDVLSLFSSK SQQKGVELAV YISDRVPDML IGDPGRFRQI LTNLMGNSIK FTEKGHIFVT VHLVDELFES
0601: IDGETASSPE STLSGLPVAD RQRSWENFKA FSSNGHRSFE PSPPDINLIV SVEDTGVGIP VEAQSRIFTP FMQVGPSISR THGGTGIGLS ISKCLVGLMK
0701: GEIGFSSTPK VGSTFTFTAV FSNGMQPAER KNDNNQPIFS EFRGMKAVVV DHRPARAKVS WYHFQRLGIR VEVVPRVEQA LHYLKIGTTT VNMILIEQEI
0801: WNREADDFIK KLQKDPLFLS PKLILLANSV ESSISEALCT GIDPPIVIVK PLRASMLAAT LQRGLGIGIR EPPQHKGPPA LILRNLLLGR KILIVDDNNV
0901: NLRVAAGALK KYGADVVCAE SGIKAISLLK PPHEFDACFM DIQMPEMDGF EATRRIRDME EEMNKRIKNG EALIVENGNK TSWHLPVLAM TADVIQATHE
1001: ECLKCGMDGY VSKPFEAEQL YREVSRFFNS PSDTES

Arabidopsis Description

AHK3HK3 [Source:UniProtKB/TrEMBL;Acc:A0A178WL02]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.