Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KXG34012 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G43560.1 | KXG34012 | AT1G27320.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043294_P006 | Maize | nucleus | 87.19 | 82.42 |
| Os01t0775300-01 | Rice | cytosol, mitochondrion, nucleus | 67.02 | 62.24 |
| PGSC0003DMT400042094 | Potato | cytosol | 20.58 | 61.18 |
| OQU79503 | Sorghum | nucleus | 22.81 | 60.93 |
| TraesCS3D01G310000.1 | Wheat | nucleus | 63.64 | 59.88 |
| TraesCS3B01G343300.2 | Wheat | nucleus | 64.13 | 58.83 |
| TraesCS3A01G321300.2 | Wheat | nucleus | 63.47 | 58.4 |
| AT5G52330.3 | Thale cress | cytosol | 19.01 | 57.93 |
| HORVU3Hr1G075800.5 | Barley | cytosol, nucleus, plastid | 64.13 | 56.73 |
| Solyc06g053740.2.1 | Tomato | cytosol | 18.84 | 54.81 |
| KXG22306 | Sorghum | nucleus | 55.37 | 52.02 |
| CDX73257 | Canola | cytosol | 16.78 | 50.0 |
| Bra023279.1-P | Field mustard | cytosol | 13.72 | 47.56 |
| CDX93823 | Canola | cytosol | 14.88 | 46.51 |
| VIT_05s0020g04980.t01 | Wine grape | nucleus | 39.01 | 41.19 |
| KRH34524 | Soybean | nucleus | 38.76 | 41.1 |
| AT4G16045.1 | Thale cress | cytosol | 12.98 | 41.1 |
| KRH31732 | Soybean | nucleus | 38.43 | 40.83 |
| GSMUA_Achr2P12590_001 | Banana | nucleus | 36.03 | 40.52 |
| KRG92287 | Soybean | nucleus | 37.77 | 40.09 |
| EES16279 | Sorghum | nucleus | 36.78 | 39.66 |
| CDY26906 | Canola | cytosol | 7.19 | 39.55 |
| Bra010174.1-P | Field mustard | cytosol | 7.19 | 39.55 |
| CDY32539 | Canola | nucleus | 31.82 | 38.27 |
| CDY10066 | Canola | nucleus | 32.07 | 38.26 |
| CDX86642 | Canola | nucleus | 32.98 | 38.18 |
| CDY01258 | Canola | cytosol | 6.45 | 38.05 |
| CDY01264 | Canola | cytosol | 6.45 | 38.05 |
| Solyc09g089560.2.1 | Tomato | nucleus | 34.71 | 38.04 |
| CDY18218 | Canola | nucleus | 33.14 | 37.9 |
| CDX89828 | Canola | nucleus | 33.22 | 37.89 |
| AT5G43560.1 | Thale cress | nucleus | 32.98 | 37.82 |
| Solyc06g053750.2.1 | Tomato | nucleus | 35.54 | 37.79 |
| KRG90366 | Soybean | endoplasmic reticulum, plasma membrane | 38.35 | 37.78 |
| Bra015302.1-P | Field mustard | nucleus | 33.06 | 37.74 |
| Solyc03g005430.2.1 | Tomato | nucleus | 35.37 | 37.25 |
| Bra032518.1-P | Field mustard | nucleus | 30.5 | 37.12 |
| AT1G04300.3 | Thale cress | nucleus | 32.64 | 36.51 |
| Bra033684.1-P | Field mustard | nucleus | 25.21 | 32.9 |
| CDY22344 | Canola | nucleus | 25.21 | 32.9 |
| GSMUA_Achr5P03190_001 | Banana | nucleus | 37.85 | 32.44 |
| CDX94711 | Canola | nucleus | 25.54 | 32.09 |
| PGSC0003DMT400042093 | Potato | nucleus | 10.74 | 19.46 |
| EES15989 | Sorghum | cytosol | 13.64 | 14.71 |
| EES09985 | Sorghum | cytosol | 13.22 | 14.31 |
| KXG34448 | Sorghum | nucleus | 12.98 | 14.04 |
| KXG33467 | Sorghum | nucleus | 12.64 | 13.69 |
| Bra041162.1-P | Field mustard | cytosol, nucleus, plastid | 1.24 | 7.54 |
| EES07147 | Sorghum | nucleus, plastid | 10.33 | 7.51 |
| OQU79121 | Sorghum | nucleus | 5.95 | 7.11 |
Protein Annotations
| EnsemblPlants:EES01550 | EnsemblPlantsGene:SORBI_3003G313500 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | ncoils:Coil | PANTHER:PTHR45001 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:EES01550 | ProteinID:EES01550.2 | SEG:seg | SMART:SM00061 |
| SUPFAM:SSF49599 | UniParc:UPI00081AC2D7 | UniProt:C5XLL7 | MapMan:22.5.1.6 | : | : |
Description
hypothetical protein
Coordinates
chr3:-:64154244..64168663
Molecular Weight (calculated)
134275.0 Da
IEP (calculated)
6.494
GRAVY (calculated)
-0.665
Length
1210 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADAVTMDDS AASTSGLGDK DHSVSADSLS EWRSREHVDN GIPSTSPPFW DTDSEDDDPG PRPSDLFGRY TWKIENFSKE KKREMKSEPF EAGGYKWYIL
0101: VYPQGCDVSN HLSLFLCVAD HEKLLPGWSH FAQFTIAVGN LDPKKVKYSD TLHKFWKKEH DWGWKKFMEL SKIQDGFLVD DVLEIIAQVQ VIREKADRPF
0201: RCLDRPYRRE LLRVYMTNIE QIYRRFVHER RRKLVRLIDD DMRWSSFRAF WLAIDPTTKH RMSREKSDII LKIVVKHFFV EKDVTSTLVM DALYTGLKAL
0301: EACSNGKKGT VTSMDLEELS APMVHVDMDM FVLAGDFITL LERAALEPLS CQSLSQKDDK CSQTRAKDGG TGEINKVSIE REERRLTELG QKILEIFVLS
0401: HIFSGIEVAY QEAVALKRQE ELIREEELLE NEMKGKRGSA TEKDKRSKKK QAKQKKNNRK VKDKEREEKS DSNFLERHQD GSTNHDREDS KQVGQSAVIK
0501: ADNFGEGASD LSDKLSGSTE TCKDDDSTVD IETLVTSVSA AVNSIRGKIN NLLDSTSLIT PNRGRSRRNR GISSIIISQY EDDLPSSSCS DRNMSACGPA
0601: PRRDQETALL TLKDRLRELG QRLHEKEIEG KELLKAHLEK KAAAEATVGS SLASSSNSEK TPQVLKGPEQ SSVIVNDANI DAPLPKAVPV ATSDDSNEAV
0701: PATATSTMNT KSVLVSPTPS KLEQVLCEEH VSSSSQQINK APLTPSRSPL VDNKATPTPP KSPVPQADTV VKATPAPPKS PLPQIDTVAK AAAPTKSSTS
0801: QLDKVANIQA APKSPAPQAD EVASHNSVSR QILSTSISKT REDTVSERAS VASVPGTPTP MSRPTSAPLL QVPRSTMPPT PSVQVSPLLS RSLTVSERPN
0901: NEPSPPAPVY VTQTYRNAIL GKGHLDTTPA TLEQSTSVCP NTAVSQPWSA YAMATSVMAP FERNDQLPGK QGFVFGPSRA EALNNRHSWK GNSDVNGHTW
1001: KDDVPNQQMT NCDAHVHHSK DISYQQLSSS GTEQPRLGGL QSRELQREIP AASFVSRQQY GSVGEEFPHI DIINDLLDED QSSAHMAVSP LHEYHTFGLP
1101: FSSGGNMADS ETASVSSSVR FDLTDLYYDE GYRRAYDTQN ALRRLDAYPN GRLDSTAPQR WPYNHPNPAV NLGNSSNVFP QQLGEYTNLA SGRVNGEYLD
1201: YMYRRANGQW
0101: VYPQGCDVSN HLSLFLCVAD HEKLLPGWSH FAQFTIAVGN LDPKKVKYSD TLHKFWKKEH DWGWKKFMEL SKIQDGFLVD DVLEIIAQVQ VIREKADRPF
0201: RCLDRPYRRE LLRVYMTNIE QIYRRFVHER RRKLVRLIDD DMRWSSFRAF WLAIDPTTKH RMSREKSDII LKIVVKHFFV EKDVTSTLVM DALYTGLKAL
0301: EACSNGKKGT VTSMDLEELS APMVHVDMDM FVLAGDFITL LERAALEPLS CQSLSQKDDK CSQTRAKDGG TGEINKVSIE REERRLTELG QKILEIFVLS
0401: HIFSGIEVAY QEAVALKRQE ELIREEELLE NEMKGKRGSA TEKDKRSKKK QAKQKKNNRK VKDKEREEKS DSNFLERHQD GSTNHDREDS KQVGQSAVIK
0501: ADNFGEGASD LSDKLSGSTE TCKDDDSTVD IETLVTSVSA AVNSIRGKIN NLLDSTSLIT PNRGRSRRNR GISSIIISQY EDDLPSSSCS DRNMSACGPA
0601: PRRDQETALL TLKDRLRELG QRLHEKEIEG KELLKAHLEK KAAAEATVGS SLASSSNSEK TPQVLKGPEQ SSVIVNDANI DAPLPKAVPV ATSDDSNEAV
0701: PATATSTMNT KSVLVSPTPS KLEQVLCEEH VSSSSQQINK APLTPSRSPL VDNKATPTPP KSPVPQADTV VKATPAPPKS PLPQIDTVAK AAAPTKSSTS
0801: QLDKVANIQA APKSPAPQAD EVASHNSVSR QILSTSISKT REDTVSERAS VASVPGTPTP MSRPTSAPLL QVPRSTMPPT PSVQVSPLLS RSLTVSERPN
0901: NEPSPPAPVY VTQTYRNAIL GKGHLDTTPA TLEQSTSVCP NTAVSQPWSA YAMATSVMAP FERNDQLPGK QGFVFGPSRA EALNNRHSWK GNSDVNGHTW
1001: KDDVPNQQMT NCDAHVHHSK DISYQQLSSS GTEQPRLGGL QSRELQREIP AASFVSRQQY GSVGEEFPHI DIINDLLDED QSSAHMAVSP LHEYHTFGLP
1101: FSSGGNMADS ETASVSSSVR FDLTDLYYDE GYRRAYDTQN ALRRLDAYPN GRLDSTAPQR WPYNHPNPAV NLGNSSNVFP QQLGEYTNLA SGRVNGEYLD
1201: YMYRRANGQW
0001: MAEAVDEDSG VGRSLEESSN GQHSQAGEAL SEWRSSGQVE NGTPSTSPSY WDIDDDDDYG LKPSELYGQY TWKIPKFSEI TKREHRSNVF EAGGYKWYIL
0101: IYPQGCDVCN HLSLFLCVAN YDKLLPGWSQ FAQFTISVLS QDLKKSKFSD TLHRFWKKEH DWGWKKFMEL PKLKDGFIDE SGCLTIEAKV QVIRERVDRP
0201: FRCLDCGYRR ELVRVYFQNV EQICRRFVEE KRSKLGRLIE DKARWTSFGV FWLGMDQNSR RRMCREKVDV ILKGVVKHFF VEKEVSSTLV MDSLYSGLKA
0301: LEGQTKNMKA RSRLLDAKQL PAPIVSVDKD MFVLVDDVLL LLERAALEPL PPKDEKGRQN RTKDGNDGEE VNKEADERDE RRLTELGRRT VEIFILSHIF
0401: STKIEVAHQE AIALKRQEEL IREEEEAWLA ETEQRAKRGA AEREKKSKKK QAKQKRNKNK GKDKRKEEKV SFATHAKDLE ENQNQNQNDE EEKDSVTEKA
0501: QSSAEKPDTL GDVSDISDSV DGSADILQPD LEDRDSSSVL WDTDALEIHP PSSEGSSRGR GISISTPNGI TEGKSHSTMD DSSSTCSNDS IRSGVTNGSY
0601: QGNSLNFRNQ KSPNKGKNQQ VKAMTDAHSL ASETDDQPST LGTDPKGQNY SSEASNVGES DWVVVSHIQE PEGSRNRIPV GRERKTVQSI VNSVDMDRPK
0701: EKSTAVLSSP RNVAKNPSPL TQTKPEKKSI STADGIPNRK VLATGPPSSS QVVLPSDIQS QTVGLRADMQ KLSAPKQPPA TTISRPSSAP IIPAMRPSPI
0801: TVSSSVQTTT SLPRSVSSAG RLGPDPSLHN QQTYTPQSYK NAIVGNSLGS SSSSFNHHPS SHGVVPTTLP SSSYSQAPTS SYQSSFPYSQ DGLLWTGRSP
0901: SSVNMGMYNN TYSPAVTSNR SLNHMDVQIA QQQAQSMMTD EFPHLDIIND LLEDEQCSNM VYNGSIFNPQ PQVFNGQYSS YHGELLSGGR TRSFGEEGLH
1001: YMARGPYGTD GMMPRQWQMT NMDLSLPAMR SNGMEDGTSS AANYHHSYFG LDASNPSFTS GINGYTEFRP SNGH
0101: IYPQGCDVCN HLSLFLCVAN YDKLLPGWSQ FAQFTISVLS QDLKKSKFSD TLHRFWKKEH DWGWKKFMEL PKLKDGFIDE SGCLTIEAKV QVIRERVDRP
0201: FRCLDCGYRR ELVRVYFQNV EQICRRFVEE KRSKLGRLIE DKARWTSFGV FWLGMDQNSR RRMCREKVDV ILKGVVKHFF VEKEVSSTLV MDSLYSGLKA
0301: LEGQTKNMKA RSRLLDAKQL PAPIVSVDKD MFVLVDDVLL LLERAALEPL PPKDEKGRQN RTKDGNDGEE VNKEADERDE RRLTELGRRT VEIFILSHIF
0401: STKIEVAHQE AIALKRQEEL IREEEEAWLA ETEQRAKRGA AEREKKSKKK QAKQKRNKNK GKDKRKEEKV SFATHAKDLE ENQNQNQNDE EEKDSVTEKA
0501: QSSAEKPDTL GDVSDISDSV DGSADILQPD LEDRDSSSVL WDTDALEIHP PSSEGSSRGR GISISTPNGI TEGKSHSTMD DSSSTCSNDS IRSGVTNGSY
0601: QGNSLNFRNQ KSPNKGKNQQ VKAMTDAHSL ASETDDQPST LGTDPKGQNY SSEASNVGES DWVVVSHIQE PEGSRNRIPV GRERKTVQSI VNSVDMDRPK
0701: EKSTAVLSSP RNVAKNPSPL TQTKPEKKSI STADGIPNRK VLATGPPSSS QVVLPSDIQS QTVGLRADMQ KLSAPKQPPA TTISRPSSAP IIPAMRPSPI
0801: TVSSSVQTTT SLPRSVSSAG RLGPDPSLHN QQTYTPQSYK NAIVGNSLGS SSSSFNHHPS SHGVVPTTLP SSSYSQAPTS SYQSSFPYSQ DGLLWTGRSP
0901: SSVNMGMYNN TYSPAVTSNR SLNHMDVQIA QQQAQSMMTD EFPHLDIIND LLEDEQCSNM VYNGSIFNPQ PQVFNGQYSS YHGELLSGGR TRSFGEEGLH
1001: YMARGPYGTD GMMPRQWQMT NMDLSLPAMR SNGMEDGTSS AANYHHSYFG LDASNPSFTS GINGYTEFRP SNGH
Arabidopsis Description
TRAF1BTNF receptor-associated factor homolog 1b [Source:UniProtKB/Swiss-Prot;Acc:A8MQL1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.