Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KXG34012 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G43560.1 | KXG34012 | AT1G27320.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038655_P003 | Maize | nucleus | 91.15 | 90.31 |
| Os05t0508700-01 | Rice | nucleus | 43.01 | 71.85 |
| TraesCS1B01G339200.1 | Wheat | nucleus | 69.8 | 64.86 |
| TraesCS1D01G327700.1 | Wheat | nucleus | 69.41 | 64.41 |
| TraesCS1A01G325900.1 | Wheat | nucleus | 68.79 | 63.83 |
| OQU79503 | Sorghum | nucleus | 22.36 | 63.58 |
| PGSC0003DMT400042094 | Potato | cytosol | 19.41 | 61.43 |
| AT5G52330.3 | Thale cress | cytosol | 18.87 | 61.21 |
| HORVU1Hr1G078170.6 | Barley | cytosol | 68.01 | 60.92 |
| EES01550 | Sorghum | nucleus | 52.02 | 55.37 |
| Solyc06g053740.2.1 | Tomato | cytosol | 17.86 | 55.29 |
| CDX73257 | Canola | cytosol | 15.68 | 49.75 |
| Bra023279.1-P | Field mustard | cytosol | 12.89 | 47.56 |
| CDX93823 | Canola | cytosol | 13.98 | 46.51 |
| GSMUA_Achr2P12590_001 | Banana | nucleus | 35.79 | 42.84 |
| AT4G16045.1 | Thale cress | cytosol | 12.5 | 42.15 |
| EES16279 | Sorghum | nucleus | 36.34 | 41.71 |
| KRH34524 | Soybean | nucleus | 36.88 | 41.63 |
| KRH31732 | Soybean | nucleus | 36.8 | 41.62 |
| VIT_05s0020g04980.t01 | Wine grape | nucleus | 36.72 | 41.27 |
| CDX86642 | Canola | nucleus | 33.31 | 41.05 |
| KRG92287 | Soybean | nucleus | 36.34 | 41.05 |
| CDY32539 | Canola | nucleus | 31.99 | 40.95 |
| CDY10066 | Canola | nucleus | 32.22 | 40.93 |
| CDX89828 | Canola | nucleus | 33.0 | 40.06 |
| Bra010174.1-P | Field mustard | cytosol | 6.83 | 40.0 |
| CDY26906 | Canola | cytosol | 6.83 | 40.0 |
| CDY18218 | Canola | nucleus | 32.84 | 39.98 |
| Bra015302.1-P | Field mustard | nucleus | 32.84 | 39.91 |
| Bra032518.1-P | Field mustard | nucleus | 30.67 | 39.74 |
| Solyc09g089560.2.1 | Tomato | nucleus | 34.01 | 39.67 |
| AT1G04300.3 | Thale cress | nucleus | 32.92 | 39.19 |
| Solyc06g053750.2.1 | Tomato | nucleus | 34.55 | 39.1 |
| Solyc03g005430.2.1 | Tomato | nucleus | 34.78 | 38.99 |
| AT5G43560.1 | Thale cress | nucleus | 31.83 | 38.86 |
| KRG90366 | Soybean | endoplasmic reticulum, plasma membrane | 36.8 | 38.6 |
| CDY01258 | Canola | cytosol | 6.06 | 38.05 |
| CDY01264 | Canola | cytosol | 5.98 | 37.56 |
| GSMUA_Achr5P03190_001 | Banana | nucleus | 36.49 | 33.29 |
| CDY22344 | Canola | nucleus | 23.68 | 32.9 |
| Bra033684.1-P | Field mustard | nucleus | 23.68 | 32.9 |
| CDX94711 | Canola | nucleus | 24.22 | 32.4 |
| PGSC0003DMT400042093 | Potato | nucleus | 11.18 | 21.56 |
| EES09985 | Sorghum | cytosol | 12.73 | 14.67 |
| EES15989 | Sorghum | cytosol | 12.73 | 14.62 |
| KXG34448 | Sorghum | nucleus | 11.49 | 13.24 |
| KXG33467 | Sorghum | nucleus | 11.49 | 13.24 |
| OQU79121 | Sorghum | nucleus | 6.06 | 7.71 |
| EES07147 | Sorghum | nucleus, plastid | 9.16 | 7.09 |
| Bra041162.1-P | Field mustard | cytosol, nucleus, plastid | 1.01 | 6.53 |
Protein Annotations
| EnsemblPlants:KXG22306 | EnsemblPlantsGene:SORBI_3009G191000 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | ncoils:Coil | PANTHER:PTHR45001 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:KXG22305.1 | ProteinID:KXG22306 | ProteinID:KXG22306.1 | SEG:seg |
| SMART:SM00061 | SUPFAM:SSF49599 | UniParc:UPI00081ADB20 | UniProt:A0A1B6PA09 | MapMan:22.5.1.6 | : |
Description
hypothetical protein
Coordinates
chr9:+:54314798..54326350
Molecular Weight (calculated)
141298.0 Da
IEP (calculated)
8.676
GRAVY (calculated)
-0.669
Length
1288 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGSAVTDDS AASTTGLRDD ERSLSGESFS EWRSCERADS DTPSTSPPFW DSDGDDDDPG PKPSELFGRY TWRIENFSKE KKREMKSEPF EAGGFKWYIL
0101: VYPQGCDVSN HLSLFLCVAN HDKLLPGWSH FAQFTIAVAN IDPKKMKYSD TLHRFWKKEH DWGWKKFMEL SKIQDGFLVD DVLEIIAQVQ VIREKVDRPF
0201: RCLDRPYRRE LIGIYMTNVE QIYRRFVEER RSKLSKLIED KMKWSSFRVF WSAIDPNTRH RMSREKTDTI LKMLVKQFFV EKEVTSTLVM DSLYTSLKAL
0301: EYRMKGKKGK TKLADLEELP APMVHVDMDM FVLADDVIAL LERAALEPLP CQPLAPKDDK TSQSRMKDGS SGEVYKVSME REERRLTELG QKILETFVLS
0401: HIFSGIEVAY QEAVALKRQE ELIREEEEEA GLLEHQMKGK RGGGANEKDK RAKKKQTKQK KNNRKAKDKE RDEKCEVKIL ERLRDETAID NSDGLPAKVE
0501: VIAKVDALEE GSSDGSDMPN RGKNQRNKGL SIIGSAEEGD GLPSTSSVTG GSGRNGSGCC TAPKLDQDTV LLTLRDKLRK LGQRLHEKNI EGQKLLKAHF
0601: EARDAKAKAE ESSDSSNSLD KPPDVPESPM HSSEDTVDLK VNGTPNKDAS VVNPVLEESV SGIPATANNE SVPSSATTKV GPVSNKDNAS SLKMKVTMAS
0701: PCSKLHPADM DKDAPLPSKS PRMNRAAPVP PKLPLADKAT PVPSKLPSAD KATPVPPKAL PVNKTTLVRP KSPAVDKATP IRPKSPAVDK ATPVRSQSPA
0801: VDKATLVRPQ SPAVDKATPV HPQSPAIDKA TPVLLKSPAV DKATPVPPKS PPVDKASPAL PKSLSGAKDA PVPLRSLQID RFIPAPPRLS QVDKAALPSS
0901: EQTHTSPATN SEAQGATTSR KVTVSSVLEV SAASRPSSAP VLPTPRSTAP AASHIQTSTL LSRSMSEAAG RRSVNDPSFS APSYTPQTYR NAIVGKTGLA
1001: TTSASLAYQS SSLGQDNAPS QPLSAYASST AVMMPPAGRS EQLSARHGFR SGSGKLEGHD SWQQWKGDSN VDMHLWRDHA PYQQMTNSQA YDQSLRDDTY
1101: QQACSRGTEK FSMHAGLQAR QFQTGTPASH VWHQPQGPVA EEFPHLDIIN DLLEEDQING SIPESFRQDY NVFGLPFSPR GNLSDMEVAS VRSPARFNPT
1201: KYDGGFSGAY DINAVNGLRE RQFPSLDSYS NGLSDVSASK PWLNGSASPS VSLGVNANGY HPQVGDYPNL GSGVNGVSLW RRHANGRW
0101: VYPQGCDVSN HLSLFLCVAN HDKLLPGWSH FAQFTIAVAN IDPKKMKYSD TLHRFWKKEH DWGWKKFMEL SKIQDGFLVD DVLEIIAQVQ VIREKVDRPF
0201: RCLDRPYRRE LIGIYMTNVE QIYRRFVEER RSKLSKLIED KMKWSSFRVF WSAIDPNTRH RMSREKTDTI LKMLVKQFFV EKEVTSTLVM DSLYTSLKAL
0301: EYRMKGKKGK TKLADLEELP APMVHVDMDM FVLADDVIAL LERAALEPLP CQPLAPKDDK TSQSRMKDGS SGEVYKVSME REERRLTELG QKILETFVLS
0401: HIFSGIEVAY QEAVALKRQE ELIREEEEEA GLLEHQMKGK RGGGANEKDK RAKKKQTKQK KNNRKAKDKE RDEKCEVKIL ERLRDETAID NSDGLPAKVE
0501: VIAKVDALEE GSSDGSDMPN RGKNQRNKGL SIIGSAEEGD GLPSTSSVTG GSGRNGSGCC TAPKLDQDTV LLTLRDKLRK LGQRLHEKNI EGQKLLKAHF
0601: EARDAKAKAE ESSDSSNSLD KPPDVPESPM HSSEDTVDLK VNGTPNKDAS VVNPVLEESV SGIPATANNE SVPSSATTKV GPVSNKDNAS SLKMKVTMAS
0701: PCSKLHPADM DKDAPLPSKS PRMNRAAPVP PKLPLADKAT PVPSKLPSAD KATPVPPKAL PVNKTTLVRP KSPAVDKATP IRPKSPAVDK ATPVRSQSPA
0801: VDKATLVRPQ SPAVDKATPV HPQSPAIDKA TPVLLKSPAV DKATPVPPKS PPVDKASPAL PKSLSGAKDA PVPLRSLQID RFIPAPPRLS QVDKAALPSS
0901: EQTHTSPATN SEAQGATTSR KVTVSSVLEV SAASRPSSAP VLPTPRSTAP AASHIQTSTL LSRSMSEAAG RRSVNDPSFS APSYTPQTYR NAIVGKTGLA
1001: TTSASLAYQS SSLGQDNAPS QPLSAYASST AVMMPPAGRS EQLSARHGFR SGSGKLEGHD SWQQWKGDSN VDMHLWRDHA PYQQMTNSQA YDQSLRDDTY
1101: QQACSRGTEK FSMHAGLQAR QFQTGTPASH VWHQPQGPVA EEFPHLDIIN DLLEEDQING SIPESFRQDY NVFGLPFSPR GNLSDMEVAS VRSPARFNPT
1201: KYDGGFSGAY DINAVNGLRE RQFPSLDSYS NGLSDVSASK PWLNGSASPS VSLGVNANGY HPQVGDYPNL GSGVNGVSLW RRHANGRW
0001: MAEAVDEDSG VGRSLEESSN GQHSQAGEAL SEWRSSGQVE NGTPSTSPSY WDIDDDDDYG LKPSELYGQY TWKIPKFSEI TKREHRSNVF EAGGYKWYIL
0101: IYPQGCDVCN HLSLFLCVAN YDKLLPGWSQ FAQFTISVLS QDLKKSKFSD TLHRFWKKEH DWGWKKFMEL PKLKDGFIDE SGCLTIEAKV QVIRERVDRP
0201: FRCLDCGYRR ELVRVYFQNV EQICRRFVEE KRSKLGRLIE DKARWTSFGV FWLGMDQNSR RRMCREKVDV ILKGVVKHFF VEKEVSSTLV MDSLYSGLKA
0301: LEGQTKNMKA RSRLLDAKQL PAPIVSVDKD MFVLVDDVLL LLERAALEPL PPKDEKGRQN RTKDGNDGEE VNKEADERDE RRLTELGRRT VEIFILSHIF
0401: STKIEVAHQE AIALKRQEEL IREEEEAWLA ETEQRAKRGA AEREKKSKKK QAKQKRNKNK GKDKRKEEKV SFATHAKDLE ENQNQNQNDE EEKDSVTEKA
0501: QSSAEKPDTL GDVSDISDSV DGSADILQPD LEDRDSSSVL WDTDALEIHP PSSEGSSRGR GISISTPNGI TEGKSHSTMD DSSSTCSNDS IRSGVTNGSY
0601: QGNSLNFRNQ KSPNKGKNQQ VKAMTDAHSL ASETDDQPST LGTDPKGQNY SSEASNVGES DWVVVSHIQE PEGSRNRIPV GRERKTVQSI VNSVDMDRPK
0701: EKSTAVLSSP RNVAKNPSPL TQTKPEKKSI STADGIPNRK VLATGPPSSS QVVLPSDIQS QTVGLRADMQ KLSAPKQPPA TTISRPSSAP IIPAMRPSPI
0801: TVSSSVQTTT SLPRSVSSAG RLGPDPSLHN QQTYTPQSYK NAIVGNSLGS SSSSFNHHPS SHGVVPTTLP SSSYSQAPTS SYQSSFPYSQ DGLLWTGRSP
0901: SSVNMGMYNN TYSPAVTSNR SLNHMDVQIA QQQAQSMMTD EFPHLDIIND LLEDEQCSNM VYNGSIFNPQ PQVFNGQYSS YHGELLSGGR TRSFGEEGLH
1001: YMARGPYGTD GMMPRQWQMT NMDLSLPAMR SNGMEDGTSS AANYHHSYFG LDASNPSFTS GINGYTEFRP SNGH
0101: IYPQGCDVCN HLSLFLCVAN YDKLLPGWSQ FAQFTISVLS QDLKKSKFSD TLHRFWKKEH DWGWKKFMEL PKLKDGFIDE SGCLTIEAKV QVIRERVDRP
0201: FRCLDCGYRR ELVRVYFQNV EQICRRFVEE KRSKLGRLIE DKARWTSFGV FWLGMDQNSR RRMCREKVDV ILKGVVKHFF VEKEVSSTLV MDSLYSGLKA
0301: LEGQTKNMKA RSRLLDAKQL PAPIVSVDKD MFVLVDDVLL LLERAALEPL PPKDEKGRQN RTKDGNDGEE VNKEADERDE RRLTELGRRT VEIFILSHIF
0401: STKIEVAHQE AIALKRQEEL IREEEEAWLA ETEQRAKRGA AEREKKSKKK QAKQKRNKNK GKDKRKEEKV SFATHAKDLE ENQNQNQNDE EEKDSVTEKA
0501: QSSAEKPDTL GDVSDISDSV DGSADILQPD LEDRDSSSVL WDTDALEIHP PSSEGSSRGR GISISTPNGI TEGKSHSTMD DSSSTCSNDS IRSGVTNGSY
0601: QGNSLNFRNQ KSPNKGKNQQ VKAMTDAHSL ASETDDQPST LGTDPKGQNY SSEASNVGES DWVVVSHIQE PEGSRNRIPV GRERKTVQSI VNSVDMDRPK
0701: EKSTAVLSSP RNVAKNPSPL TQTKPEKKSI STADGIPNRK VLATGPPSSS QVVLPSDIQS QTVGLRADMQ KLSAPKQPPA TTISRPSSAP IIPAMRPSPI
0801: TVSSSVQTTT SLPRSVSSAG RLGPDPSLHN QQTYTPQSYK NAIVGNSLGS SSSSFNHHPS SHGVVPTTLP SSSYSQAPTS SYQSSFPYSQ DGLLWTGRSP
0901: SSVNMGMYNN TYSPAVTSNR SLNHMDVQIA QQQAQSMMTD EFPHLDIIND LLEDEQCSNM VYNGSIFNPQ PQVFNGQYSS YHGELLSGGR TRSFGEEGLH
1001: YMARGPYGTD GMMPRQWQMT NMDLSLPAMR SNGMEDGTSS AANYHHSYFG LDASNPSFTS GINGYTEFRP SNGH
Arabidopsis Description
TRAF1BTNF receptor-associated factor homolog 1b [Source:UniProtKB/Swiss-Prot;Acc:A8MQL1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.