Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033684.1-P | Field mustard | nucleus | 98.17 | 98.17 |
| CDX94711 | Canola | nucleus | 85.98 | 82.76 |
| CDY68000 | Canola | nucleus | 6.36 | 55.66 |
| OQU79503 | Sorghum | nucleus | 23.19 | 47.46 |
| CDX73257 | Canola | cytosol | 19.96 | 45.57 |
| CDX93823 | Canola | cytosol | 18.02 | 43.15 |
| CDX89828 | Canola | nucleus | 45.85 | 40.06 |
| CDY26906 | Canola | cytosol | 9.49 | 40.0 |
| CDX86642 | Canola | nucleus | 45.09 | 40.0 |
| CDY18218 | Canola | nucleus | 45.31 | 39.7 |
| CDY10066 | Canola | nucleus | 43.15 | 39.45 |
| CDY32539 | Canola | nucleus | 42.61 | 39.26 |
| Os05t0508700-01 | Rice | nucleus | 28.48 | 34.24 |
| CDY01264 | Canola | cytosol | 7.55 | 34.15 |
| CDY01258 | Canola | cytosol | 7.44 | 33.66 |
| GSMUA_Achr2P12590_001 | Banana | nucleus | 36.14 | 31.13 |
| EES16279 | Sorghum | nucleus | 37.0 | 30.57 |
| TraesCS5B01G071600.1 | Wheat | nucleus | 35.81 | 29.59 |
| TraesCS5D01G072000.1 | Wheat | nucleus | 35.81 | 29.56 |
| HORVU5Hr1G016190.3 | Barley | nucleus | 35.6 | 29.39 |
| TraesCS5A01G060400.1 | Wheat | nucleus | 35.6 | 29.39 |
| EES01550 | Sorghum | nucleus | 32.9 | 25.21 |
| Os01t0775300-01 | Rice | cytosol, mitochondrion, nucleus | 34.41 | 24.48 |
| GSMUA_Achr5P03190_001 | Banana | nucleus | 37.22 | 24.43 |
| TraesCS3D01G310000.1 | Wheat | nucleus | 33.66 | 24.26 |
| TraesCS3B01G343300.2 | Wheat | nucleus | 33.87 | 23.81 |
| TraesCS3A01G321300.2 | Wheat | nucleus | 33.66 | 23.73 |
| KXG22306 | Sorghum | nucleus | 32.9 | 23.68 |
| HORVU3Hr1G075800.5 | Barley | cytosol, nucleus, plastid | 34.41 | 23.32 |
| TraesCS1B01G339200.1 | Wheat | nucleus | 33.76 | 22.58 |
| TraesCS1A01G325900.1 | Wheat | nucleus | 33.55 | 22.41 |
| TraesCS1D01G327700.1 | Wheat | nucleus | 33.23 | 22.19 |
| HORVU1Hr1G078170.6 | Barley | cytosol | 33.01 | 21.28 |
| CDY72484 | Canola | cytosol | 3.45 | 19.51 |
| Os12t0597200-01 | Rice | cytosol, nucleus, plastid | 5.83 | 17.48 |
| Zm00001d034390_P001 | Maize | nucleus | 3.99 | 14.34 |
| CDY04994 | Canola | cytosol | 14.24 | 11.83 |
| CDY14077 | Canola | cytosol | 14.24 | 11.83 |
| CDY55765 | Canola | cytosol | 14.13 | 11.75 |
| CDX81009 | Canola | cytosol | 14.02 | 11.63 |
| CDY01069 | Canola | cytosol | 13.92 | 11.57 |
| CDX70087 | Canola | cytosol | 13.92 | 11.56 |
| CDX98939 | Canola | cytosol | 13.92 | 11.56 |
| CDY53923 | Canola | cytosol | 13.59 | 11.34 |
| CDX73847 | Canola | cytosol | 13.05 | 11.03 |
| CDX72290 | Canola | cytosol, mitochondrion, plastid | 2.05 | 10.44 |
| CDY08485 | Canola | cytosol | 8.31 | 9.3 |
| CDY47909 | Canola | cytosol | 1.08 | 8.77 |
| CDY00212 | Canola | cytosol | 7.23 | 6.53 |
| CDY08151 | Canola | cytosol | 7.23 | 6.44 |
| CDY05943 | Canola | cytosol | 7.23 | 6.44 |
| CDY67533 | Canola | cytosol, nucleus | 1.29 | 6.25 |
| CDY35362 | Canola | nucleus, plastid | 10.25 | 5.77 |
| CDY11532 | Canola | nucleus, plastid | 10.25 | 5.75 |
| CDY58924 | Canola | nucleus, plastid | 10.25 | 5.74 |
| CDX76975 | Canola | nucleus, plastid | 9.92 | 5.62 |
| CDX86966 | Canola | cytosol | 4.42 | 5.57 |
Protein Annotations
| EnsemblPlants:CDY22344 | EnsemblPlantsGene:GSBRNA2T00018820001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | ncoils:Coil | PANTHER:PTHR45001 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY22344 | ProteinID:CDY22344.1 | SEG:seg | SMART:SM00061 |
| SUPFAM:SSF49599 | UniParc:UPI0004EE10C4 | UniProt:A0A078GAD7 | MapMan:22.5.1.6 | : | : |
Description
BnaA06g36660DBnaA06g36660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAD7]
Coordinates
chrLK032130:-:228365..233106
Molecular Weight (calculated)
104763.0 Da
IEP (calculated)
6.744
GRAVY (calculated)
-0.802
Length
927 amino acids
Sequence
(BLAST)
(BLAST)
001: MLETSNEDCG SGQSSEEENL NRQRRYLEAL AEWRSSDQVE NGFPSTWPPN WDIDDGSKHS ELYGKHTWKI EKYSEINKPE LRSDVFDAGG YKWYISIYPQ
101: GSDVCNYPAL LLCLANHAEI PPGCSHFVQY TLALVNKDPK KSIYFDSLNR LKKLEHYWDW DKLIELPKLQ EGYIDDLDSL IIKAQVQVIR EKIDRPFRCL
201: SSQYRRELLR VYLPYVENIC WQFMEVERIK LFNLMQDNEK WESFSSFWLR LDQNTRRKMS REKMDVVLNI AAKFFFVLRQ GTSTLMMDSL YSGWKTIEDE
301: TKKKKNRQRQ MDNVELPAGP APIVSVDQDM FVLVDDLLVL MKRTVMAPLS IKEENGSQNP SKVWDVGEEY SEEAIVRDES RLTEVGRRTM EMLVLTHIYG
401: KVEVAYKEHT AWEMQEELIR EEEEEWLAES KHKAKRGTTE KERKSKKKQA KKKKNNKKEK RKEEKARSQT EERDTEEEES VREKTESPAE EPDTLGESMP
501: VPCELDAPEI HNPPSENTSG GRGRGSSISI PSGDSSISLP NGVAERKSTS VYSNESVRSY KGNVSNRQNK IWRIKGKTQP RNVSGANSSA TETENQPSRH
601: ASNPKSQSHS SETRRVVEAG VVISPIQEAQ NPREHHPVTK DRGTVLTQEK SPAVFSPPKA SPWNLPSARS PVSDQQASQS RDIEFQTVGS RAALQNTTST
701: IPPSMSTRPL RAPTFLPKPA APRTSATSFA RSMSSTGPVS APTHTQTYIP QSYKNAVVGS DHSSSQSTET SALLSISNHS GFPINVASAE VPWTGGSSSS
801: RDTSATNISG NHRMNPVSTS MRQNGAQIRR PAQSLMTDEF PHLGIINDLL EEEPVLMDAT SGYRLPQWLS DVYSYLADVG ISGRYRSYSE HMSGSSSSSS
901: SFSLYGNGQS ANMATRSQND AFYLPYL
101: GSDVCNYPAL LLCLANHAEI PPGCSHFVQY TLALVNKDPK KSIYFDSLNR LKKLEHYWDW DKLIELPKLQ EGYIDDLDSL IIKAQVQVIR EKIDRPFRCL
201: SSQYRRELLR VYLPYVENIC WQFMEVERIK LFNLMQDNEK WESFSSFWLR LDQNTRRKMS REKMDVVLNI AAKFFFVLRQ GTSTLMMDSL YSGWKTIEDE
301: TKKKKNRQRQ MDNVELPAGP APIVSVDQDM FVLVDDLLVL MKRTVMAPLS IKEENGSQNP SKVWDVGEEY SEEAIVRDES RLTEVGRRTM EMLVLTHIYG
401: KVEVAYKEHT AWEMQEELIR EEEEEWLAES KHKAKRGTTE KERKSKKKQA KKKKNNKKEK RKEEKARSQT EERDTEEEES VREKTESPAE EPDTLGESMP
501: VPCELDAPEI HNPPSENTSG GRGRGSSISI PSGDSSISLP NGVAERKSTS VYSNESVRSY KGNVSNRQNK IWRIKGKTQP RNVSGANSSA TETENQPSRH
601: ASNPKSQSHS SETRRVVEAG VVISPIQEAQ NPREHHPVTK DRGTVLTQEK SPAVFSPPKA SPWNLPSARS PVSDQQASQS RDIEFQTVGS RAALQNTTST
701: IPPSMSTRPL RAPTFLPKPA APRTSATSFA RSMSSTGPVS APTHTQTYIP QSYKNAVVGS DHSSSQSTET SALLSISNHS GFPINVASAE VPWTGGSSSS
801: RDTSATNISG NHRMNPVSTS MRQNGAQIRR PAQSLMTDEF PHLGIINDLL EEEPVLMDAT SGYRLPQWLS DVYSYLADVG ISGRYRSYSE HMSGSSSSSS
901: SFSLYGNGQS ANMATRSQND AFYLPYL
0001: MAEAVDEDSG VGRSLEESSN GQHSQAGEAL SEWRSSGQVE NGTPSTSPSY WDIDDDDDYG LKPSELYGQY TWKIPKFSEI TKREHRSNVF EAGGYKWYIL
0101: IYPQGCDVCN HLSLFLCVAN YDKLLPGWSQ FAQFTISVLS QDLKKSKFSD TLHRFWKKEH DWGWKKFMEL PKLKDGFIDE SGCLTIEAKV QVIRERVDRP
0201: FRCLDCGYRR ELVRVYFQNV EQICRRFVEE KRSKLGRLIE DKARWTSFGV FWLGMDQNSR RRMCREKVDV ILKGVVKHFF VEKEVSSTLV MDSLYSGLKA
0301: LEGQTKNMKA RSRLLDAKQL PAPIVSVDKD MFVLVDDVLL LLERAALEPL PPKDEKGRQN RTKDGNDGEE VNKEADERDE RRLTELGRRT VEIFILSHIF
0401: STKIEVAHQE AIALKRQEEL IREEEEAWLA ETEQRAKRGA AEREKKSKKK QAKQKRNKNK GKDKRKEEKV SFATHAKDLE ENQNQNQNDE EEKDSVTEKA
0501: QSSAEKPDTL GDVSDISDSV DGSADILQPD LEDRDSSSVL WDTDALEIHP PSSEGSSRGR GISISTPNGI TEGKSHSTMD DSSSTCSNDS IRSGVTNGSY
0601: QGNSLNFRNQ KSPNKGKNQQ VKAMTDAHSL ASETDDQPST LGTDPKGQNY SSEASNVGES DWVVVSHIQE PEGSRNRIPV GRERKTVQSI VNSVDMDRPK
0701: EKSTAVLSSP RNVAKNPSPL TQTKPEKKSI STADGIPNRK VLATGPPSSS QVVLPSDIQS QTVGLRADMQ KLSAPKQPPA TTISRPSSAP IIPAMRPSPI
0801: TVSSSVQTTT SLPRSVSSAG RLGPDPSLHN QQTYTPQSYK NAIVGNSLGS SSSSFNHHPS SHGVVPTTLP SSSYSQAPTS SYQSSFPYSQ DGLLWTGRSP
0901: SSVNMGMYNN TYSPAVTSNR SLNHMDVQIA QQQAQSMMTD EFPHLDIIND LLEDEQCSNM VYNGSIFNPQ PQVFNGQYSS YHGELLSGGR TRSFGEEGLH
1001: YMARGPYGTD GMMPRQWQMT NMDLSLPAMR SNGMEDGTSS AANYHHSYFG LDASNPSFTS GINGYTEFRP SNGH
0101: IYPQGCDVCN HLSLFLCVAN YDKLLPGWSQ FAQFTISVLS QDLKKSKFSD TLHRFWKKEH DWGWKKFMEL PKLKDGFIDE SGCLTIEAKV QVIRERVDRP
0201: FRCLDCGYRR ELVRVYFQNV EQICRRFVEE KRSKLGRLIE DKARWTSFGV FWLGMDQNSR RRMCREKVDV ILKGVVKHFF VEKEVSSTLV MDSLYSGLKA
0301: LEGQTKNMKA RSRLLDAKQL PAPIVSVDKD MFVLVDDVLL LLERAALEPL PPKDEKGRQN RTKDGNDGEE VNKEADERDE RRLTELGRRT VEIFILSHIF
0401: STKIEVAHQE AIALKRQEEL IREEEEAWLA ETEQRAKRGA AEREKKSKKK QAKQKRNKNK GKDKRKEEKV SFATHAKDLE ENQNQNQNDE EEKDSVTEKA
0501: QSSAEKPDTL GDVSDISDSV DGSADILQPD LEDRDSSSVL WDTDALEIHP PSSEGSSRGR GISISTPNGI TEGKSHSTMD DSSSTCSNDS IRSGVTNGSY
0601: QGNSLNFRNQ KSPNKGKNQQ VKAMTDAHSL ASETDDQPST LGTDPKGQNY SSEASNVGES DWVVVSHIQE PEGSRNRIPV GRERKTVQSI VNSVDMDRPK
0701: EKSTAVLSSP RNVAKNPSPL TQTKPEKKSI STADGIPNRK VLATGPPSSS QVVLPSDIQS QTVGLRADMQ KLSAPKQPPA TTISRPSSAP IIPAMRPSPI
0801: TVSSSVQTTT SLPRSVSSAG RLGPDPSLHN QQTYTPQSYK NAIVGNSLGS SSSSFNHHPS SHGVVPTTLP SSSYSQAPTS SYQSSFPYSQ DGLLWTGRSP
0901: SSVNMGMYNN TYSPAVTSNR SLNHMDVQIA QQQAQSMMTD EFPHLDIIND LLEDEQCSNM VYNGSIFNPQ PQVFNGQYSS YHGELLSGGR TRSFGEEGLH
1001: YMARGPYGTD GMMPRQWQMT NMDLSLPAMR SNGMEDGTSS AANYHHSYFG LDASNPSFTS GINGYTEFRP SNGH
Arabidopsis Description
TRAF1BTNF receptor-associated factor homolog 1b [Source:UniProtKB/Swiss-Prot;Acc:A8MQL1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.