Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08485 | Canola | cytosol | 72.11 | 97.1 |
| CDY47909 | Canola | cytosol | 9.51 | 92.98 |
| CDY67533 | Canola | cytosol, nucleus | 15.87 | 92.19 |
| AT3G11910.1 | Thale cress | cytosol | 91.93 | 91.93 |
| CDY53923 | Canola | cytosol | 89.87 | 90.19 |
| CDX73847 | Canola | cytosol | 88.07 | 89.52 |
| CDX70087 | Canola | cytosol | 87.89 | 87.81 |
| CDX98939 | Canola | cytosol | 87.62 | 87.54 |
| CDY14077 | Canola | cytosol | 87.53 | 87.46 |
| CDY04994 | Canola | cytosol | 87.44 | 87.37 |
| CDY55765 | Canola | cytosol | 87.26 | 87.26 |
| CDX81009 | Canola | cytosol | 85.56 | 85.33 |
| CDY72484 | Canola | cytosol | 12.47 | 84.76 |
| VIT_08s0032g00600.t01 | Wine grape | cytosol | 83.5 | 83.42 |
| Solyc10g081610.1.1 | Tomato | cytosol, extracellular, nucleus | 80.99 | 80.48 |
| PGSC0003DMT400072539 | Potato | cytosol | 80.81 | 80.3 |
| CDX72290 | Canola | cytosol, mitochondrion, plastid | 10.76 | 65.93 |
| CDX73257 | Canola | cytosol | 7.71 | 21.18 |
| CDX93823 | Canola | cytosol | 6.46 | 18.6 |
| CDY68000 | Canola | nucleus | 1.61 | 16.98 |
| CDY00212 | Canola | cytosol | 15.34 | 16.67 |
| CDY05943 | Canola | cytosol | 15.43 | 16.54 |
| CDY08151 | Canola | cytosol | 15.43 | 16.54 |
| CDY10066 | Canola | nucleus | 13.27 | 14.6 |
| CDX86642 | Canola | nucleus | 13.63 | 14.55 |
| CDY32539 | Canola | nucleus | 13.09 | 14.51 |
| CDX89828 | Canola | nucleus | 13.54 | 14.23 |
| CDX94711 | Canola | nucleus | 12.29 | 14.23 |
| CDY26906 | Canola | cytosol | 2.78 | 14.09 |
| CDY18218 | Canola | nucleus | 13.36 | 14.08 |
| CDY22344 | Canola | nucleus | 11.57 | 13.92 |
| CDY01264 | Canola | cytosol | 2.42 | 13.17 |
| CDY01258 | Canola | cytosol | 2.15 | 11.71 |
| CDX86966 | Canola | cytosol | 7.62 | 11.55 |
| CDX76975 | Canola | nucleus, plastid | 16.14 | 11.0 |
| CDY11532 | Canola | nucleus, plastid | 16.23 | 10.96 |
| CDY58924 | Canola | nucleus, plastid | 16.23 | 10.94 |
| CDY35362 | Canola | nucleus, plastid | 16.05 | 10.87 |
Protein Annotations
| MapMan:14.6.2.3 | MapMan:19.2.3.1.1.5 | Gene3D:2.60.210.10 | Gene3D:3.10.20.90 | Gene3D:3.90.70.10 | GO:A0A078EK33 |
| EnsemblPlants:CDY01069 | ProteinID:CDY01069 | ProteinID:CDY01069.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| EnsemblPlantsGene:GSBRNA2T00111112001 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:IPR028889 | InterPro:MATH/TRAF_dom | PFAM:PF00443 |
| PFAM:PF00917 | PFAM:PF12436 | PFAM:PF14533 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50144 |
| PFscan:PS50235 | PANTHER:PTHR24006 | PANTHER:PTHR24006:SF565 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SMART:SM00061 |
| SUPFAM:SSF49599 | SUPFAM:SSF54001 | InterPro:TRAF-like | UniParc:UPI0004EEDBBC | InterPro:USP7_ICP0-binding_dom | InterPro:USP_C |
| InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : | : | : |
Description
BnaC05g41310D
Coordinates
chrLK031923:-:1007236..1016537
Molecular Weight (calculated)
130435.0 Da
IEP (calculated)
5.395
GRAVY (calculated)
-0.653
Length
1115 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVTPTPLDQQ DDEEMLVPHS DVVEGPQPME VAQPEAAAAT AVENPPVEEP PTMKYTWTIP GFTRLNNRKH YSDVFVVGGY KWRVLIFPKG NNVDNLSMYL
0101: DVADAANLPY GWSRFSQFGL AIVNQINSSY SIRKESQHQF NSRESDWGFT SFMPLSELYD PTRGYLVNDT VVIEAEVAVR KVLDYWSYDS KKETGFVGLK
0201: NQGATCYMNS LLQTLYHIPY FRKAVYHMPT TENDAPTASI PLALQSLFYK LQYNDTSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK LEDKMKGTVV
0301: EGTIQKLFEG HHMNYIECIN VDYKSTRKES FYDLQLDVKG CKDVYESFDK YVEVERLEGD NKYHAEGHDL QDAKKGVLFI EFPPVLQLQL KRFEYDFMRD
0401: TMVKINDRYE FPLELDLDRD NRKYLSPDAD KSVRNLYTLH SVLVHSGGVH GGHYYAFIRP TLSDQWYKFD DERVTKEDVK RALEEQYGGE EELPQNNPGF
0501: NNPPFKFTKY SNAYMLVYIR ESEKDKIICN VDEKDIAEHL RVRLKKEKEE KEEKRKYKAQ AHLFTTIKVA RDEDITEQIG KNKYFDLVDH EKVKSFRIQK
0601: QTPFQLFKEE VAKEFGVPVE LQRFWIWAKR QNYTYRPNRP LLPHEELQTV ELLREACNKT NNAELKLFLE IERGPEERPI PPPDKSSADI LLFFKLYDPE
0701: NAILRYVGRL MVKNSSKPMD IVGQLNQMAG FAPDEEIELF EEIKFEPCVM CEHLDKKTSF RLSQIEDGDI ICFQKPLSIQ ENECPYPDVP SFLAYVQNRE
0801: VVRFRSLEKP KEDEFTMELS KLHTYDDVVQ RLAEKLGLDD PSKIRLTSHN CYSQQPKPQP IKYRGVDHLS DMLAHYNQTS DILYYEVLDI PLPELQGLKT
0901: LKVAFHHATK DEVVIHNIRL PKQSTVGDVI NELKTKVELS HPDAELRLLE VFFHKIYKIF SSTERIENIN DQYWTLRAEE IPEEEKNIGP SDRLVHVYHF
1001: TKEAGQNQAQ VQNFGEPFFL VIHEGETLEE IKSRIQKKLH VPDEDFAKWK FASFSMGRPD YLQDTEVVYD RFQRKDVYGA WEQYLGLEHV DNAPKRAYAA
1101: NQNRHAYEKP VRIYN
0101: DVADAANLPY GWSRFSQFGL AIVNQINSSY SIRKESQHQF NSRESDWGFT SFMPLSELYD PTRGYLVNDT VVIEAEVAVR KVLDYWSYDS KKETGFVGLK
0201: NQGATCYMNS LLQTLYHIPY FRKAVYHMPT TENDAPTASI PLALQSLFYK LQYNDTSVAT KELTKSFGWD TYDSFMQHDV QELNRVLCEK LEDKMKGTVV
0301: EGTIQKLFEG HHMNYIECIN VDYKSTRKES FYDLQLDVKG CKDVYESFDK YVEVERLEGD NKYHAEGHDL QDAKKGVLFI EFPPVLQLQL KRFEYDFMRD
0401: TMVKINDRYE FPLELDLDRD NRKYLSPDAD KSVRNLYTLH SVLVHSGGVH GGHYYAFIRP TLSDQWYKFD DERVTKEDVK RALEEQYGGE EELPQNNPGF
0501: NNPPFKFTKY SNAYMLVYIR ESEKDKIICN VDEKDIAEHL RVRLKKEKEE KEEKRKYKAQ AHLFTTIKVA RDEDITEQIG KNKYFDLVDH EKVKSFRIQK
0601: QTPFQLFKEE VAKEFGVPVE LQRFWIWAKR QNYTYRPNRP LLPHEELQTV ELLREACNKT NNAELKLFLE IERGPEERPI PPPDKSSADI LLFFKLYDPE
0701: NAILRYVGRL MVKNSSKPMD IVGQLNQMAG FAPDEEIELF EEIKFEPCVM CEHLDKKTSF RLSQIEDGDI ICFQKPLSIQ ENECPYPDVP SFLAYVQNRE
0801: VVRFRSLEKP KEDEFTMELS KLHTYDDVVQ RLAEKLGLDD PSKIRLTSHN CYSQQPKPQP IKYRGVDHLS DMLAHYNQTS DILYYEVLDI PLPELQGLKT
0901: LKVAFHHATK DEVVIHNIRL PKQSTVGDVI NELKTKVELS HPDAELRLLE VFFHKIYKIF SSTERIENIN DQYWTLRAEE IPEEEKNIGP SDRLVHVYHF
1001: TKEAGQNQAQ VQNFGEPFFL VIHEGETLEE IKSRIQKKLH VPDEDFAKWK FASFSMGRPD YLQDTEVVYD RFQRKDVYGA WEQYLGLEHV DNAPKRAYAA
1101: NQNRHAYEKP VRIYN
0001: MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTDPAA TAVENPPPED PPSLKFTWTI PMFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
0101: LDVADAANLP YGWSRYSQFS LAVVNQVNNR YSIRKETQHQ FNARESDWGF TSFMPLSELY EPTRGYLVND TVLIEAEVAV RKVLDYWSYD SKKETGFVGL
0201: KNQGATCYMN SLLQTLYHIP YFRKAVYHMP TTENDAPTAS IPLALQSLFY KLQYNDTSVA TKELTKSFGW DTYDSFMQHD VQELNRVLCE KLEDKMKGTV
0301: VEGTIQKLFE GHHMNYIECI NVDYKSTRKE SFYDLQLDVK GCKDVYASFD KYVEVERLEG DNKYHAEGHD LQDAKKGVLF IDFPPVLQLQ LKRFEYDFMR
0401: DTMVKINDRY EFPLQLDLDR EDGRYLSPDA DKSVRNLYTL HSVLVHSGGV HGGHYYAFIR PTLSDQWYKF DDERVTKEDV KRALEEQYGG EEELPQNNPG
0501: FNNPPFKFTK YSNAYMLVYI RESDKDKIIC NVDEKDIAEH LRVRLKKEQE EKEDKRKYKA QAHLFTTIKV ARDDDITEQI GKNIYFDLVD HEKVRSFRIQ
0601: KQTPFQQFKE EVAKEFGVPV QLQRFWIWAK RQNHTYRPNR PLSPNEELQT VGQIREASNK ANNAELKLFL EIERGPDDLP IPPPEKTSED ILLFFKLYDP
0701: ENAVLRYVGR LMVKSSSKPM DIVGQLNKMA GFAPDEEIEL FEEIKFEPCV MCEQIDKKTS FRLCQIEDGD IICYQKPLSI EESEFRYPDV PSFLEYVQNR
0801: ELVRFRTLEK PKEDEFTMEL SKLHTYDDVV ERVAEKLGLD DPSKLRLTSH NCYSQQPKPQ PIKYRGVDHL SDMLVHYNQT SDILYYEVLD IPLPELQGLK
0901: TLKVAFHSAT KDEVIIHNIR LPKQSTVGDV INELKTKVEL SHQDAELRLL EVFFHKIYKI FPSTERIENI NDQYWTLRAE EIPEEEKNIG PNDRLIHVYH
1001: FTKEAGQNQQ VQNFGEPFFL VIHEGETLEE IKTRIQKKLH VPDEDFAKWK FASFSMGRPD YLLDTDVVYN RFQRRDVYGA WEQYLGLEHI DNAPKRAYAA
1101: NQNRHAYEKP VKIYN
Arabidopsis Description
UBP13UBP13 [Source:UniProtKB/TrEMBL;Acc:A0A178VEE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.