Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11532 | Canola | nucleus, plastid | 98.67 | 98.79 |
| Bra007802.1-P | Field mustard | nucleus, plastid | 98.55 | 97.96 |
| CDX76975 | Canola | nucleus, plastid | 89.78 | 90.71 |
| CDY35362 | Canola | nucleus, plastid | 88.94 | 89.31 |
| AT2G25320.3 | Thale cress | nucleus, plastid | 89.9 | 88.83 |
| AT2G25330.1 | Thale cress | nucleus | 35.25 | 84.13 |
| KRH61745 | Soybean | nucleus | 43.35 | 73.24 |
| VIT_04s0008g05690.t01 | Wine grape | nucleus | 73.16 | 71.9 |
| KRH52412 | Soybean | nucleus | 72.25 | 71.17 |
| Solyc06g017970.2.1 | Tomato | nucleus | 69.83 | 68.3 |
| KRH61744 | Soybean | cytosol | 24.37 | 62.87 |
| GSMUA_Achr6P03040_001 | Banana | nucleus | 16.87 | 61.59 |
| GSMUA_Achr5P23550_001 | Banana | plastid | 48.31 | 60.81 |
| Os02t0613400-01 | Rice | extracellular | 10.52 | 58.98 |
| GSMUA_Achr6P03030_001 | Banana | cytosol, nucleus, plastid | 28.84 | 56.72 |
| TraesCS6A01G230500.1 | Wheat | nucleus, plastid | 55.99 | 55.88 |
| TraesCS6B01G251400.1 | Wheat | nucleus, plastid | 56.05 | 55.78 |
| TraesCS6D01G204500.1 | Wheat | nucleus, plastid | 55.86 | 55.6 |
| EES07147 | Sorghum | nucleus, plastid | 55.86 | 55.5 |
| HORVU0Hr1G016000.5 | Barley | nucleus | 55.56 | 54.96 |
| Zm00001d051075_P002 | Maize | nucleus | 55.38 | 54.11 |
| CDY72484 | Canola | cytosol | 2.42 | 24.39 |
| CDY68000 | Canola | nucleus | 1.09 | 16.98 |
| CDX70087 | Canola | cytosol | 11.12 | 16.49 |
| CDY04994 | Canola | cytosol | 11.06 | 16.4 |
| CDY14077 | Canola | cytosol | 11.0 | 16.31 |
| CDX98939 | Canola | cytosol | 11.0 | 16.31 |
| CDY01069 | Canola | cytosol | 10.94 | 16.23 |
| CDY55765 | Canola | cytosol | 10.94 | 16.23 |
| CDX81009 | Canola | cytosol | 10.76 | 15.92 |
| CDX73847 | Canola | cytosol | 10.1 | 15.22 |
| CDY08485 | Canola | cytosol | 7.62 | 15.22 |
| CDY53923 | Canola | cytosol | 10.16 | 15.12 |
| CDX73257 | Canola | cytosol | 3.63 | 14.78 |
| CDX72290 | Canola | cytosol, mitochondrion, plastid | 1.57 | 14.29 |
| CDY47909 | Canola | cytosol | 0.97 | 14.04 |
| CDX93823 | Canola | cytosol | 3.26 | 13.95 |
| CDY67533 | Canola | cytosol, nucleus | 1.57 | 13.54 |
| CDY32539 | Canola | nucleus | 6.53 | 10.74 |
| CDX86642 | Canola | nucleus | 6.71 | 10.62 |
| CDY10066 | Canola | nucleus | 6.47 | 10.55 |
| CDY00212 | Canola | cytosol | 6.47 | 10.43 |
| CDY22344 | Canola | nucleus | 5.74 | 10.25 |
| CDY18218 | Canola | nucleus | 6.53 | 10.21 |
| CDX94711 | Canola | nucleus | 5.8 | 9.97 |
| CDX86966 | Canola | cytosol | 4.41 | 9.92 |
| CDX89828 | Canola | nucleus | 6.35 | 9.9 |
| CDY01264 | Canola | cytosol | 1.21 | 9.76 |
| CDY05943 | Canola | cytosol | 6.05 | 9.62 |
| CDY08151 | Canola | cytosol | 6.05 | 9.62 |
| CDY01258 | Canola | cytosol | 1.15 | 9.27 |
| CDY26906 | Canola | cytosol | 1.09 | 8.18 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.1 | GO:A0A078J6Q2 | UniProt:A0A078J6Q2 | EnsemblPlants:CDY58924 | ProteinID:CDY58924 |
| ProteinID:CDY58924.1 | ncoils:Coil | InterPro:FANCD2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00025329001 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | PFAM:PD936484 |
| PFAM:PF00917 | PFAM:PF14631 | PFscan:PS50144 | PANTHER:PTHR24007 | PANTHER:PTHR24007:SF6 | SMART:SM00061 |
| SUPFAM:SSF49599 | InterPro:TRAF-like | UniParc:UPI0004EE3B5F | SEG:seg | : | : |
Description
BnaC08g49060DBnaC08g49060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6Q2]
Coordinates
chrLK033712:+:13801..20198
Molecular Weight (calculated)
185586.0 Da
IEP (calculated)
5.158
GRAVY (calculated)
-0.417
Length
1654 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKKQSSSDAV SSSSSAIDLS HPPSSSSSEK PLCSSSISPA EDHQVGSSRD GSGGAQEIVA IDRRGEYTAV CRWTVENFTR VKAKALWSKY FDVGGYDCRL
0101: LVYPRGDSQA LPGYISIYLQ IMDPRGTSSS RWDCFASYRL SIVNHVDESL TIHKDSWHRF SSKKKSHGWC DFTLNSSVLD PKMGFLFNND SLLITADILI
0201: LNESVSFSRD SNSDSGSLFK EPGPLPDVLS GKFTWKVNNF SLFKEMIKTQ KIMSPVFPAG ECNLRISVYQ SVVNSQEYIS MCLESKETDK TMASDRSCWC
0301: LFRMSALNQK PGCAHMHRDS YGRFAADNKN GDNTSLGWND YMKMSDFVNP ESGFLLDDTA VFSTSFHVIK EFSSFTKNGG KSDAHMGRFT WKIENFTRLK
0401: DLLKKRKITG LCIKSRRFQI GNRDCRLIVY PRGQSQPPCH LSVFLEVTDS RSSSDWSCFV SHRLSVVNQR LEEKSVTKES QNRYSKAAKD WGWREFVTLT
0501: SLFDQDSGFL VQDTVVFSAE VLILKETSVT KDYVEAESAN SASQIDSSVK RSSFTWKVEN FLAFKEIMET RKIFSKFFQA GGCELRIGVY ESFDTICIYL
0601: ESDQSAGTDV DNNFWVKYKM GILNQKNPAK SVWKESSICT KTWNNSVLQF MKVSDMLEAD AGFLVRDTVV FVCEVLDCCP WFEFSDLEVL ASDDDQDALT
0701: TDPDEIIDSE ESEGISGDEE DTFQDFLSQA GFHLTFGENP SQPQVTLREK LLMDAGAIAG FLTGLRVYLD DPTKVKRLLL PTKISCNDRS KLTKSDESSP
0801: SLMNLLMGVK VLQQAIIDLL LDIMVECCQP SEEEGSHSEP SLMDAKTDGC VASPSLESTR ENGAAEPLQY LVDERFKSDA DATTLSTSAV EGSGMNGIDM
0901: LEKALTIEPV SPPETYARQS SDAPGQSKTK WPEQSEELLG LIVNSLKTLD SAVPQGCPEP RRRPHSAQKI ALVLNRAPKD LQPDLVSLVP KLVEHSEHPL
1001: AAYALIERLQ TPEAEPALRE PVYNALSQLD CDSEVWEHIL LQSFEFLTDS NGESLVAAIH FIFKTASQCQ HLPEAVRSVR ERLKVLGADV SVCVLEYLSK
1101: TVHSWAEIAE MILKDINCDD SLGGNFVTLP CGPFLIGENE TTSETADLMD EHEFYSNRQF CDVYILLEML SISCLAVEAS QTFERAVARG AIVAQSVAMV
1201: LEKRRVQGPN LNATSGDPVL EGEASDEQAA EGIEFRGILN LAETLAHSGD PQVTGFVKML YTILFKWFPD QPFRVQMLTR LVDRFTSHAS GSNELDLELE
1301: VLAILIFQEQ EVARPVLAML KKVVEHANID RAALWHQLRA NKEELVRLKE EKKTEIQNLA KEKSAITQKL SESEAANTRL KSEMKAETDR FAREKKDLVE
1401: QFRDVESQLE WVRSEREDEI AKLSSDKKSL LNRLHEAETQ LSLLKTRKHD ELKKVGKEKT ALTEKLKVTE AARKRFEEEL KRYATENATR EELRKSLEDE
1501: IRRLTQTLGQ TQEEKREKED QISRCEAYID GMESKLQACQ QYIHTLESSL RDEISRHAPL YGANLDSLSM KELDTIARIH EEGLRQIHAL QQRKGNGLPL
1601: PHGLSHGHTL YPTTPPQLPP TPIGLPSQIL PNGSGGHSNG HVNGSVRPWF SHHT
0101: LVYPRGDSQA LPGYISIYLQ IMDPRGTSSS RWDCFASYRL SIVNHVDESL TIHKDSWHRF SSKKKSHGWC DFTLNSSVLD PKMGFLFNND SLLITADILI
0201: LNESVSFSRD SNSDSGSLFK EPGPLPDVLS GKFTWKVNNF SLFKEMIKTQ KIMSPVFPAG ECNLRISVYQ SVVNSQEYIS MCLESKETDK TMASDRSCWC
0301: LFRMSALNQK PGCAHMHRDS YGRFAADNKN GDNTSLGWND YMKMSDFVNP ESGFLLDDTA VFSTSFHVIK EFSSFTKNGG KSDAHMGRFT WKIENFTRLK
0401: DLLKKRKITG LCIKSRRFQI GNRDCRLIVY PRGQSQPPCH LSVFLEVTDS RSSSDWSCFV SHRLSVVNQR LEEKSVTKES QNRYSKAAKD WGWREFVTLT
0501: SLFDQDSGFL VQDTVVFSAE VLILKETSVT KDYVEAESAN SASQIDSSVK RSSFTWKVEN FLAFKEIMET RKIFSKFFQA GGCELRIGVY ESFDTICIYL
0601: ESDQSAGTDV DNNFWVKYKM GILNQKNPAK SVWKESSICT KTWNNSVLQF MKVSDMLEAD AGFLVRDTVV FVCEVLDCCP WFEFSDLEVL ASDDDQDALT
0701: TDPDEIIDSE ESEGISGDEE DTFQDFLSQA GFHLTFGENP SQPQVTLREK LLMDAGAIAG FLTGLRVYLD DPTKVKRLLL PTKISCNDRS KLTKSDESSP
0801: SLMNLLMGVK VLQQAIIDLL LDIMVECCQP SEEEGSHSEP SLMDAKTDGC VASPSLESTR ENGAAEPLQY LVDERFKSDA DATTLSTSAV EGSGMNGIDM
0901: LEKALTIEPV SPPETYARQS SDAPGQSKTK WPEQSEELLG LIVNSLKTLD SAVPQGCPEP RRRPHSAQKI ALVLNRAPKD LQPDLVSLVP KLVEHSEHPL
1001: AAYALIERLQ TPEAEPALRE PVYNALSQLD CDSEVWEHIL LQSFEFLTDS NGESLVAAIH FIFKTASQCQ HLPEAVRSVR ERLKVLGADV SVCVLEYLSK
1101: TVHSWAEIAE MILKDINCDD SLGGNFVTLP CGPFLIGENE TTSETADLMD EHEFYSNRQF CDVYILLEML SISCLAVEAS QTFERAVARG AIVAQSVAMV
1201: LEKRRVQGPN LNATSGDPVL EGEASDEQAA EGIEFRGILN LAETLAHSGD PQVTGFVKML YTILFKWFPD QPFRVQMLTR LVDRFTSHAS GSNELDLELE
1301: VLAILIFQEQ EVARPVLAML KKVVEHANID RAALWHQLRA NKEELVRLKE EKKTEIQNLA KEKSAITQKL SESEAANTRL KSEMKAETDR FAREKKDLVE
1401: QFRDVESQLE WVRSEREDEI AKLSSDKKSL LNRLHEAETQ LSLLKTRKHD ELKKVGKEKT ALTEKLKVTE AARKRFEEEL KRYATENATR EELRKSLEDE
1501: IRRLTQTLGQ TQEEKREKED QISRCEAYID GMESKLQACQ QYIHTLESSL RDEISRHAPL YGANLDSLSM KELDTIARIH EEGLRQIHAL QQRKGNGLPL
1601: PHGLSHGHTL YPTTPPQLPP TPIGLPSQIL PNGSGGHSNG HVNGSVRPWF SHHT
0001: MKQSSSEAVS SSSSSAAADQ SHPSVSSSSS EKPLSSSSIS PAEDLQVGSS RDGSGGAQEI VAVDRPGEYS ALCRWTVESF TRVKAKALWS KYFDVGGYDC
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
0101: RLLVYPRGDS QALPGYISIY LQIMDPRGTT SSRWDCFASY RLSIVNLVDD SLTIHKDSWH RFSSKKKSHG WCDFTLNSSI LDPKMGFLFN NDSLLITADI
0201: LILNESVSFS RDNNNEGQSL YKENSIAGPM PDVLSGKFTW KVNNFSLFKD MIKTQKIMSP VFPAGECNLR ISVYQSVVNS QEYISMCLES KETEKTLVSD
0301: RSCWCLFRMS ALNQKPGCTH MHRDSYGRFA ADNKSGDNTS LGWNDYMKMS EFVNPEAGFL LDDMAVFSTS FHVIKEFSSF TKNGGLIGGR NGAGARKSDG
0401: HMGKFTWRIE NFTRLKDLLK KRKITGLCIK SKRFQIGNRD CRLIVYPRGQ SQPPCHLSVF LEVTDSRSSS DWSCFVSHRL SVVNQRLEEK SVTKESQNRY
0501: SKAAKDWGWR EFVTLTSLFD QDSGFLVQDT VVFSAEVLIL KETSATKEYV EADSTNSVSP TDNSVKKSSF TWKVENFLAF KEIMETRKIF SKFFQAGGCE
0601: LRIGVYESFD TICIYLESDQ SAGTDVDNNF WVKYKMGILN QKNPAKSVWK ESSICTKTWN NSVLQFMKVS DMLEADAGFL VRDTVVFVCE ILDCCPWFEF
0701: SDLEVLASDD DQDALTTDPD EIIDSEESEG ISGDEEDTFR DFLSRAGFHL TFGENPSQPQ VTLREKLLMD AGAIAGFLTG LRVYLDDPTK VKRLLLPTKI
0801: SCNDRSKLIK SDESSPSLMN LLMGVKVLQQ AIIDLLLDIM VECCQPSEEG SHSEPSLLSP KTDGCVAATS SESTRERGAA EPSQHLVDER FKSDTDATLS
0901: TSAVPSSEMN GIDLLEKALA IEPMSPPTTS AGQSSDASVQ SKTKWPEQSE ELLGLIVNSL KTLDAAVPQG CPEPRRRPHS AQKIALVLDR APKHLQPDLV
1001: SLVPKLVEHS EHPLAALALI ERLQKPEAEP ALREPVYNAL SQLECDSEVW EDILSQSFEL LSDLNEESLV AAIHFTFKTA SQCQHLPEAV NAVRERLKSL
1101: GADVSLCVLD YLSKTVHSWP GIAEMILRDI NTDDSVGANF ATLPCGPFLI GENETASEMA DLMEEHIFYA NRQFFDVYIL LEMLSISCLA EEASQTFERA
1201: VARGAIVAQA VAMVLEKQRV QSPNLNATSG DASLKHQDPV LEGEASEQPA TGGTEFRIIL NLAETLTHSR DPQVRGFVKM LYTILFKWFP DQPFRVQILR
1301: RLVDRFTSPT SSSHDLDLEL EILAILIFQE QEVARPVLAM LKKVVEHANI DRAALWHQLR ANKEELVRLK EEKKIEIQSM TKEKSSITQK LSESEAANTR
1401: LKSEMKAEAD RFSREKKDLV EQFRDVESQL EWIRSERQDE IDKLSSEKKT LLDRLHEAET QLALQKTRKR DELKKVGKEK NALTEKLKVT EAARKRFEEE
1501: LKRYATENVT REELRKSLED QIRQLTQTVG QTKEEKREKE DQIARCEAYI DGMESKLQAC QQYIHTLESS LREEISRHAP LYGANLESLS MKELDTIARI
1601: HEEGLRQIHA LQQRKGHTLS HGLPQGHTLY PTTPPQLPPM AIGLPPQLIP NGSGVHSNGH INGSVRPWFS HHT
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT2G25320]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.